Package index • freesearcheR

All functions

add_class_icon(): Convert class grid column to icon

add_sparkline(): Add sparkline to datagrid

argsstring2list(): Convert string of arguments to list of arguments

baseline_table(): Print a flexible baseline characteristics table

clean_date(): Attempts at applying uniform date format

clean_sep(): gsub wrapper for piping with default values for separator substituting

create_overview_datagrid(): Create a data overview datagrid

custom_theme(): Custom theme based on unity

cut_variable_ui() cut_variable_server() modal_cut_variable() winbox_cut_variable(): Module to Convert Numeric to Factor

cut(<hms>) cut(<POSIXt>) cut(<POSIXct>) cut(<Date>): Extended cutting function

data_correlations_ui() data_correlations_server(): Data correlations evaluation module

data_summary_ui() data_summary_server(): Data summary module

default_format_arguments(): Defaults qmd formats

default_parsing(): Default data parsing

factorize(): Factorize variables in data.frame

file_export(): Title

format_writer(): Merges list of named arguments for qmd header generation

get_fun_options(): Get the function options based on the selected function description

getfun(): Wrapper function to get function from character vector referring to function from namespace. Passed to 'do.call()'

gg_theme_export(): GGplot default theme for plotting export objects

gg_theme_shiny(): GGplot default theme for plotting in Shiny

index_embed(): Split vector by an index and embed addition

is_any_class(): Test class

is_consecutive(): Checks if elements in vector are equally spaced as indication of ID

is_datetime(): Test is date/datetime/time

launch(): Easily launch the freesearcheR app

m_datafileUI(): Shiny UI module to load a data file

merge_long(): Wrapper to pivot gtsummary table data to long for plotting

modify_qmd(): Wrapper to modify quarto file to render specific formats

outcome_type(): Outcome data type assessment

overview_vars(): Create a data overview data.frame ready for sparklines

plot(<tbl_regression>): Regression coef plot from gtsummary. Slightly modified to pass on arguments

possible_functions(): Get possible regression models

read_input(): Flexible file import based on extension

m_redcap_readUI() m_redcap_readServer() tdm_redcap_read redcap_app(): Shiny module to browser and export REDCap data

regression_model() regression_model_uv() regression_model_list() regression_model_uv_list(): Create a regression model programatically

regression_table(): Create table of regression model

remove_empty_cols(): Removes columns with completenes below cutoff

remove_na_attr(): Remove NA labels

shiny_freesearcheR(): Launch the freesearcheR tool locally

specify_qmd_format(): Specify format arguments to include in qmd header/frontmatter

supported_functions(): Implemented functions

tbl_merge(): A substitue to gtsummary::tbl_merge, that will use list names for the tab spanner names.

update_variables_ui() update_variables_server(): Select, rename and convert variables

update_variables_datagrid(): Modified from the datamods pacakge

write_quarto(): Wrapper to save data in RDS, load into specified qmd and render