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< title > A free and open-source browser based data analysis tool for researchers with publication ready output • FreesearchR< / title >
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< meta property = "og:title" content = "A free and open-source browser based data analysis tool for researchers with publication ready output" >
< meta name = "description" content = "Easily evaluate and analysis clinical health data in your browser on a server or on your own device. Import data from multiple sources, summarise, modify and visualise data and export key metrics and regression analysis results in a publication ready format." >
< meta property = "og:description" content = "Easily evaluate and analysis clinical health data in your browser on a server or on your own device. Import data from multiple sources, summarise, modify and visualise data and export key metrics and regression analysis results in a publication ready format." >
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< a class = "navbar-brand me-2" href = "index.html" > FreesearchR< / a >
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< li class = "nav-item" > < a class = "nav-link" href = "articles/FreesearchR.html" > Get started< / a > < / li >
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< img src = "logo.png" class = "logo" alt = "" > < h1 id = "freesearchr-" > FreesearchR
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< p > The < a href = "https://agdamsbo.shinyapps.io/FreesearchR/" class = "external-link" > < strong > < em > FreesearchR< / em > < / strong > < / a > is a simple, clinical health data exploration and analysis tool to democratise clinical research by assisting any researcher to easily evaluate and analyse data and export publication ready results.< / p >
< p > < a href = "https://agdamsbo.shinyapps.io/FreesearchR/" class = "external-link" > < strong > < em > FreesearchR< / em > < / strong > < / a > is free and open-source, and is directly accessible here: < a href = "https://agdamsbo.shinyapps.io/FreesearchR/" class = "external-link" > link to the app freely hosted on shinyapps.io< / a > . The app can also run locally, please see below.< / p >
< p > All feedback is welcome and can be shared as a GitHub issue. Any suggestions on collaboration is much welcomed. Please reach out!< / p >
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< div class = "section level2" >
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< h2 id = "motivation" > Motivation< a class = "anchor" aria-label = "anchor" href = "#motivation" > < / a >
< / h2 >
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< p > This app has the following simple goals:< / p >
< ol style = "list-style-type: decimal" >
< li > < p > help the health clinician getting an overview of data in quality improvement projects and clinical research< / p > < / li >
< li > < p > help learners get a good start analysing data and coding in < em > R< / em > < / p > < / li >
< li > < p > ease quick data overview and basic visualisations for any clinical researcher< / p > < / li >
< / ol >
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< h2 id = "install-locally" > Install locally< a class = "anchor" aria-label = "anchor" href = "#install-locally" > < / a >
< / h2 >
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< p > The < strong > < em > FreesearchR< / em > < / strong > -tool can also be launched locally. Any data.frame available in the global environment will be accessible from the interface.< / p >
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< pre > < code > < span > < span class = "kw" > < a href = "https://rdrr.io/r/base/library.html" class = "external-link" > require< / a > < / span > < span class = "op" > (< / span > < span class = "st" > < a href = "https://devtools.r-lib.org/" class = "external-link" > "devtools"< / a > < / span > < span class = "op" > )< / span > < / span >
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< span > < span class = "fu" > devtools< / span > < span class = "fu" > ::< / span > < span class = "fu" > < a href = "https://remotes.r-lib.org/reference/install_github.html" class = "external-link" > install_github< / a > < / span > < span class = "op" > (< / span > < span class = "st" > "agdamsbo/FreesearchR"< / span > < span class = "op" > )< / span > < / span >
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< span > < span class = "kw" > < a href = "https://rdrr.io/r/base/library.html" class = "external-link" > library< / a > < / span > < span class = "op" > (< / span > < span class = "va" > < a href = "https://github.com/agdamsbo/FreesearchR" class = "external-link" > FreesearchR< / a > < / span > < span class = "op" > )< / span > < / span >
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< span > < span class = "co" > # By loading mtcars to the environment, it will be available< / span > < / span >
< span > < span class = "co" > # in the interface like any other data.frame< / span > < / span >
< span > < span class = "fu" > < a href = "https://rdrr.io/r/utils/data.html" class = "external-link" > data< / a > < / span > < span class = "op" > (< / span > < span class = "va" > mtcars< / span > < span class = "op" > )< / span > < / span >
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< span > < span class = "fu" > < a href = "reference/launch_FreesearchR.html" > launch_FreesearchR< / a > < / span > < span class = "op" > (< / span > < span class = "op" > )< / span > < / span > < / code > < / pre >
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< h2 id = "code-of-conduct" > Code of Conduct< a class = "anchor" aria-label = "anchor" href = "#code-of-conduct" > < / a >
< / h2 >
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< p > Please note that the < strong > < em > FreesearchR< / em > < / strong > project is released with a < a href = "https://contributor-covenant.org/version/2/1/CODE_OF_CONDUCT.html" class = "external-link" > Contributor Code of Conduct< / a > . By contributing to this project, you agree to abide by its terms.< / p >
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< div class = "section level2" >
< h2 id = "acknowledgements" > Acknowledgements< a class = "anchor" aria-label = "anchor" href = "#acknowledgements" > < / a >
< / h2 >
< p > Like any other project, this project was never possible without the great work of others. These are some of the sources and packages I have used:< / p >
< ul >
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< li > < p > The < strong > < em > FreesearchR< / em > < / strong > app is build with < a href = "https://shiny.posit.co/" class = "external-link" > Shiny< / a > and based on < a href = "https://www.r-project.org/" class = "external-link" > < em > R< / em > < / a > .< / p > < / li >
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< li > < p > < a href = "https://www.danieldsjoberg.com/gtsummary/" class = "external-link" > gtsummary< / a > : superb and flexible way to create publication-ready analytical and summary tables.< / p > < / li >
< li > < p > < a href = "https://github.com/dreamRs" class = "external-link" > dreamRs< / a > : maintainers of a broad selection of great extensions and tools for < a href = "https://shiny.posit.co/" class = "external-link" > Shiny< / a > .< / p > < / li >
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< li > < p > < a href = "https://easystats.github.io/easystats/" class = "external-link" > easystats< / a > : the < a href = "https://easystats.github.io/performance/articles/check_model.html" class = "external-link" > < code > performance::check_model()< / code > < / a > function was central in sparking the idea to create a data analysis tool.< / p > < / li >
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< li > < p > < a href = "https://biogen-inc.github.io/IDEAFilter/" class = "external-link" > IDEAfilter< / a > : a visually appealing data filter function based on the < a href = "https://github.com/dgkf/shinyDataFilter" class = "external-link" > {shinyDataFilter}< / a > .< / p > < / li >
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< / ul >
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< p > This project was all written by a human and not by any AI-based tools.< / p >
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< li > < a href = "https://github.com/agdamsbo/FreesearchR/" class = "external-link" > Browse source code< / a > < / li >
< li > < a href = "https://github.com/agdamsbo/FreesearchR/issues" class = "external-link" > Report a bug< / a > < / li >
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< h2 data-toc-skip > License< / h2 >
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< li > < a href = "LICENSE.html" > Full license< / a > < / li >
< li > < small > AGPL (> = 3)< / small > < / li >
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< h2 data-toc-skip > Developers< / h2 >
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< li > Andreas Gammelgaard Damsbo < br > < small class = "roles" > Author, maintainer < / small > < a href = "https://orcid.org/0000-0002-7559-1154" target = "orcid.widget" aria-label = "ORCID" class = "external-link" > < span class = "fab fa-orcid orcid" aria-hidden = "true" > < / span > < / a > < / li >
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< li > < a href = "authors.html" > More about authors...< / a > < / li >
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< h2 data-toc-skip > Dev status< / h2 >
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< li > < a href = "https://lifecycle.r-lib.org/articles/stages.html#experimental" class = "external-link" > < img src = "https://img.shields.io/badge/lifecycle-experimental-orange.svg" alt = "Lifecycle: experimental" > < / a > < / li >
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< li > < a href = "https://doi.org/10.5281/zenodo.14527429" class = "external-link" > < img src = "https://zenodo.org/badge/DOI/10.5281/zenodo.14527429.svg" alt = "DOI" > < / a > < / li >
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< li > < a href = "https://github.com/agdamsbo/FreesearchR/actions/workflows/rhub.yaml" class = "external-link" > < img src = "https://github.com/agdamsbo/FreesearchR/actions/workflows/rhub.yaml/badge.svg" alt = "rhub" > < / a > < / li >
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< li > < a href = "https://agdamsbo.shinyapps.io/FreesearchR/" class = "external-link" > < img src = "https://img.shields.io/badge/Shiny-shinyapps.io-blue?style=flat&labelColor=white&logo=RStudio&logoColor=blue" alt = "FreesearchR" > < / a > < / li >
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< p > Site built with < a href = "https://pkgdown.r-lib.org/" class = "external-link" > pkgdown< / a > 2.1.2.< / p >
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< p > Developed by Andreas Gammelgaard Damsbo. Provided without < strong > any warranty< / strong > .< / p >
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