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<!DOCTYPE html>
<!-- Generated by pkgdown: do not edit by hand --><html lang="en">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<meta charset="utf-8">
<meta http-equiv="X-UA-Compatible" content="IE=edge">
<meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no">
<title>Browser Based Data Analysis • freesearcheR</title>
<script src="deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no">
<link href="deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet">
<script src="deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet">
<link href="deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet">
<script src="deps/headroom-0.11.0/headroom.min.js"></script><script src="deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="deps/search-1.0.0/fuse.min.js"></script><script src="deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="pkgdown.js"></script><meta property="og:title" content="Browser Based Data Analysis">
<meta name="description" content="Free and open source browser based data exploration and analysis with publication ready output.">
<meta property="og:description" content="Free and open source browser based data exploration and analysis with publication ready output.">
</head>
<body>
<a href="#main" class="visually-hidden-focusable">Skip to contents</a>
<nav class="navbar navbar-expand-lg fixed-top bg-light" data-bs-theme="light" aria-label="Site navigation"><div class="container">
<a class="navbar-brand me-2" href="index.html">freesearcheR</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">25.1.1</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
<span class="navbar-toggler-icon"></span>
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<div id="navbar" class="collapse navbar-collapse ms-3">
<ul class="navbar-nav me-auto">
<li class="nav-item"><a class="nav-link" href="reference/index.html">Reference</a></li>
<li class="nav-item"><a class="nav-link" href="news/index.html">Changelog</a></li>
</ul>
<ul class="navbar-nav">
<li class="nav-item"><form class="form-inline" role="search">
<input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="search.json">
</form></li>
<li class="nav-item"><a class="external-link nav-link" href="https://github.com/agdamsbo/freesearcheR/" aria-label="GitHub"><span class="fa fab fa-github fa-lg"></span></a></li>
</ul>
</div>
</div>
</nav><div class="container template-home">
<div class="row">
<main id="main" class="col-md-9"><div class="section level1">
<div class="page-header"><h1 id="freesearcher">freesearcheR<a class="anchor" aria-label="anchor" href="#freesearcher"></a>
</h1></div>
<!-- badges: start -->
<p>This package is the backbone of the free and open browser based data exploration and analysis tool with publication ready output.</p>
<p>This package and the <strong><em>freesearcheR</em></strong>-tool is part of a large project to democratize health data analysis and removing barriers for clinicians to engage in health research.</p>
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<p>the <strong><em>freesearcheR</em></strong>-tool is online and accessible here: <a href="https://agdamsbo.shinyapps.io/freesearcheR/" class="external-link">link to the app freely hosted on shinyapps.io</a>. All feedback is welcome and can be shared as a GitHub issue.</p>
<p>Initiatives for funding continued development of the tool and surrounding initiatives is ongoing.</p>
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<div class="section level2">
<h2 id="roadmap">Roadmap<a class="anchor" aria-label="anchor" href="#roadmap"></a>
</h2>
<ul>
<li><p><label><input type="checkbox">Stratified analyses</label></p></li>
<li>
<p>Additional study designs:</p>
<ul class="task-list">
<li><p><label><input type="checkbox" checked>Cross-sectional data analyses</label></p></li>
<li><p><label><input type="checkbox">Longitudinal data analyses</label></p></li>
<li><p><label><input type="checkbox">Survival analysis</label></p></li>
</ul>
</li>
<li>
<p>More detailed variable browser</p>
<ul class="task-list">
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<li><p><label><input type="checkbox" checked>Add histograms for data distribution. 2025-01-16</label></p></li>
<li><p><label><input type="checkbox" checked>Option to edit labels. 2025-01-16</label></p></li>
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</ul>
</li>
<li><p><label><input type="checkbox">Plot regression analyses results</label></p></li>
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<li><p><label><input type="checkbox" checked>Export modified data. 2025-01-16</label></p></li>
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2025-01-16 10:40:15 +00:00
<li><p><label><input type="checkbox">Include reproducible code for all steps</label></p></li>
<li><p><label><input type="checkbox" checked><del>Modify factor levels</del> Factor level modifications is possible through converting factors to numeric &gt; cutting numeric with desired fixed values. 2024-12-12</label></p></li>
<li><p><label><input type="checkbox" checked>More options for date/datetime/time grouping/factoring. Included weekday and month-only options. 2024-12-12</label></p></li>
</ul>
</div>
<div class="section level2">
<h2 id="install-locally">Install locally<a class="anchor" aria-label="anchor" href="#install-locally"></a>
</h2>
<p>The <strong><em>freesearcheR</em></strong>-tool can also be launched locally. Any data.frame available in the global environment will be accessible from the interface.</p>
<pre><code><span><span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">require</a></span><span class="op">(</span><span class="st"><a href="https://devtools.r-lib.org/" class="external-link">"devtools"</a></span><span class="op">)</span></span>
<span><span class="fu">devtools</span><span class="fu">::</span><span class="fu"><a href="https://remotes.r-lib.org/reference/install_github.html" class="external-link">install_github</a></span><span class="op">(</span><span class="st">"agdamsbo/freesearcheR"</span><span class="op">)</span></span>
<span><span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="https://github.com/agdamsbo/freesearcheR" class="external-link">freesearcheR</a></span><span class="op">)</span></span>
<span><span class="co"># By loading mtcars to the environment, it will be available</span></span>
<span><span class="co"># in the interface like any other data.frame</span></span>
<span><span class="fu"><a href="https://rdrr.io/r/utils/data.html" class="external-link">data</a></span><span class="op">(</span><span class="va">mtcars</span><span class="op">)</span></span>
<span><span class="fu"><a href="reference/shiny_freesearcheR.html">shiny_freesearcheR</a></span><span class="op">(</span><span class="op">)</span></span></code></pre>
</div>
<div class="section level2">
<h2 id="code-of-conduct">Code of Conduct<a class="anchor" aria-label="anchor" href="#code-of-conduct"></a>
</h2>
<p>Please note that the freesearcheR project is released with a <a href="https://contributor-covenant.org/version/2/1/CODE_OF_CONDUCT.html" class="external-link">Contributor Code of Conduct</a>. By contributing to this project, you agree to abide by its terms.</p>
</div>
</div>
</main><aside class="col-md-3"><div class="links">
<h2 data-toc-skip>Links</h2>
<ul class="list-unstyled">
<li><a href="https://github.com/agdamsbo/freesearcheR/" class="external-link">Browse source code</a></li>
<li><a href="https://github.com/agdamsbo/freesearcheR/issues" class="external-link">Report a bug</a></li>
</ul>
</div>
<div class="license">
<h2 data-toc-skip>License</h2>
<ul class="list-unstyled">
<li><a href="LICENSE.html">Full license</a></li>
<li><small>AGPL (&gt;= 3)</small></li>
</ul>
</div>
<div class="community">
<h2 data-toc-skip>Community</h2>
<ul class="list-unstyled">
<li><a href="CODE_OF_CONDUCT.html">Code of conduct</a></li>
</ul>
</div>
<div class="citation">
<h2 data-toc-skip>Citation</h2>
<ul class="list-unstyled">
<li><a href="authors.html#citation">Citing freesearcheR</a></li>
</ul>
</div>
<div class="developers">
<h2 data-toc-skip>Developers</h2>
<ul class="list-unstyled">
<li>Andreas Gammelgaard Damsbo <br><small class="roles"> Author, maintainer </small> <a href="https://orcid.org/0000-0002-7559-1154" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a> </li>
</ul>
</div>
<div class="dev-status">
<h2 data-toc-skip>Dev status</h2>
<ul class="list-unstyled">
<li><a href="https://lifecycle.r-lib.org/articles/stages.html#experimental" class="external-link"><img src="https://img.shields.io/badge/lifecycle-experimental-orange.svg" alt="Lifecycle: experimental"></a></li>
<li><a href="https://github.com/agdamsbo/freesearcheR/actions/workflows/rhub.yaml" class="external-link"><img src="https://github.com/agdamsbo/freesearcheR/actions/workflows/rhub.yaml/badge.svg" alt="rhub"></a></li>
<li><a href="https://agdamsbo.shinyapps.io/freesearcheR/" class="external-link"><img src="https://img.shields.io/badge/Shiny-shinyapps.io-blue?style=flat&amp;labelColor=white&amp;logo=RStudio&amp;logoColor=blue" alt="freesearcheR"></a></li>
</ul>
</div>
</aside>
</div>
<footer><div class="pkgdown-footer-left">
<p>Developed by Andreas Gammelgaard Damsbo.</p>
</div>
<div class="pkgdown-footer-right">
<p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.1.1.</p>
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