Deploying to gh-pages from @ agdamsbo/REDCapCAST@ce6bda19bb 🚀

authors.html

@@ -54,14 +54,14 @@
       <h2 id="citation">Citation</h2>
       <p><small class="dont-index">Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/main/DESCRIPTION" class="external-link"><code>DESCRIPTION</code></a></small></p>
 
-      <p>Damsbo A, Egeler P (2025).
+      <p>Damsbo A, Egeler P (2026).
 <em>REDCapCAST: REDCap Metadata Casting and Castellated Data Handling</em>.
 R package version 25.11.1, <a href="https://github.com/agdamsbo/REDCapCAST" class="external-link">https://github.com/agdamsbo/REDCapCAST</a>.
 </p>
       <pre>@Manual{,
   title = {REDCapCAST: REDCap Metadata Casting and Castellated Data Handling},
   author = {Andreas Gammelgaard Damsbo and Paul Egeler},
-  year = {2025},
+  year = {2026},
   note = {R package version 25.11.1},
   url = {https://github.com/agdamsbo/REDCapCAST},
 }</pre>

authors.md

@@ -12,14 +12,14 @@
 Source:
 [`DESCRIPTION`](https://github.com/agdamsbo/REDCapCAST/blob/main/DESCRIPTION)
 
-Damsbo A, Egeler P (2025). *REDCapCAST: REDCap Metadata Casting and
+Damsbo A, Egeler P (2026). *REDCapCAST: REDCap Metadata Casting and
 Castellated Data Handling*. R package version 25.11.1,
 <https://github.com/agdamsbo/REDCapCAST>.
 
     @Manual{,
       title = {REDCapCAST: REDCap Metadata Casting and Castellated Data Handling},
       author = {Andreas Gammelgaard Damsbo and Paul Egeler},
-      year = {2025},
+      year = {2026},
       note = {R package version 25.11.1},
       url = {https://github.com/agdamsbo/REDCapCAST},
     }

llms.txt

@@ -119,7 +119,7 @@ contributing to this project, you agree to abide by its terms.
 - [`create_html_table()`](https://agdamsbo.github.io/REDCapCAST/reference/create_html_table.md)
   : Create two-column HTML table for data piping in REDCap instruments
 - [`create_instrument_meta()`](https://agdamsbo.github.io/REDCapCAST/reference/create_instrument_meta.md)
-  : DEPRICATED Create zips file with necessary content based on data set
+  : DEPRECATED Create zips file with necessary content based on data set
 - [`cut_string_length()`](https://agdamsbo.github.io/REDCapCAST/reference/cut_string_length.md)
   : Cut string to desired length
 - [`d2w()`](https://agdamsbo.github.io/REDCapCAST/reference/d2w.md) :

news/index.html

@@ -38,10 +38,18 @@
       <small>Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/main/NEWS.md" class="external-link"><code>NEWS.md</code></a></small>
     </div>
 
+    <div class="section level2">
+<h2 class="pkg-version" data-toc-text="26.1.1" id="redcapcast-2611">REDCapCAST 26.1.1<a class="anchor" aria-label="anchor" href="#redcapcast-2611"></a></h2>
+<p>25.11.1 was never pushed to CRAN, so this fills in for that.</p>
+<ul><li><p>FIX: spelling</p></li>
+<li><p>FIX: Suggested dependencies were trimmed including {styler}.</p></li>
+<li><p>FIX: export_redcap_instrument was updated to include default file name for the instrument zip. Ensures custom names has correct file extension.</p></li>
+</ul></div>
     <div class="section level2">
 <h2 class="pkg-version" data-toc-text="25.11.1" id="redcapcast-25111">REDCapCAST 25.11.1<a class="anchor" aria-label="anchor" href="#redcapcast-25111"></a></h2>
-<ul><li><p>FIX: logiccals exported as numeric for data upload</p></li>
+<ul><li><p>FIX: logicals exported as numeric for data upload</p></li>
 <li><p>FIX: improved name cleaning</p></li>
+<li><p>FIX: use the more robust readr::write_csv() to export data.</p></li>
 </ul></div>
     <div class="section level2">
 <h2 class="pkg-version" data-toc-text="25.3.2" id="redcapcast-2532">REDCapCAST 25.3.2<a class="anchor" aria-label="anchor" href="#redcapcast-2532"></a></h2><p class="text-muted">CRAN release: 2025-03-10</p>

news/index.md

@@ -1,11 +1,25 @@
 # Changelog
 
+## REDCapCAST 26.1.1
+
+25.11.1 was never pushed to CRAN, so this fills in for that.
+
+- FIX: spelling
+
+- FIX: Suggested dependencies were trimmed including {styler}.
+
+- FIX: export_redcap_instrument was updated to include default file name
+  for the instrument zip. Ensures custom names has correct file
+  extension.
+
 ## REDCapCAST 25.11.1
 
-- FIX: logiccals exported as numeric for data upload
+- FIX: logicals exported as numeric for data upload
 
 - FIX: improved name cleaning
 
+- FIX: use the more robust readr::write_csv() to export data.
+
 ## REDCapCAST 25.3.2
 
 CRAN release: 2025-03-10

pkgdown.yml

@@ -5,7 +5,7 @@ articles:
   Database-creation: Database-creation.html
   REDCapCAST: REDCapCAST.html
   Shiny-app: Shiny-app.html
-last_built: 2025-11-14T14:10Z
+last_built: 2026-01-28T21:50Z
 urls:
   reference: https://agdamsbo.github.io/REDCapCAST/reference
   article: https://agdamsbo.github.io/REDCapCAST/articles

reference/clean_redcap_name.html

@@ -71,6 +71,8 @@ Trying to make up for different naming conventions.</p>
     <h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
     <div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="st">"Research!, ne:ws? and c;l-.ls"</span> <span class="op">|&gt;</span> <span class="fu">clean_redcap_name</span><span class="op">(</span><span class="op">)</span></span></span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> [1] "research_news_and_clls"</span>
+<span class="r-in"><span><span class="st">"8_new_TEST_"</span> <span class="op">|&gt;</span> <span class="fu">clean_redcap_name</span><span class="op">(</span><span class="op">)</span></span></span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [1] "8_new_test"</span>
 </code></pre></div>
     </div>
   </main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>

reference/clean_redcap_name.md

@@ -25,4 +25,6 @@ vector or data frame, same format as input
 ``` r
 "Research!, ne:ws? and c;l-.ls" |> clean_redcap_name()
 #> [1] "research_news_and_clls"
+"8_new_TEST_" |> clean_redcap_name()
+#> [1] "8_new_test"
 ```

reference/create_instrument_meta.html

@@ -1,8 +1,10 @@
 <!DOCTYPE html>
-<!-- Generated by pkgdown: do not edit by hand --><html lang="en-US"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>DEPRICATED Create zips file with necessary content based on data set — create_instrument_meta • REDCapCAST</title><!-- favicons --><link rel="icon" type="image/png" sizes="96x96" href="../favicon-96x96.png"><link rel="icon" type="”image/svg+xml”" href="../favicon.svg"><link rel="apple-touch-icon" sizes="180x180" href="../apple-touch-icon.png"><link rel="icon" sizes="any" href="../favicon.ico"><link rel="manifest" href="../site.webmanifest"><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><meta property="og:title" content="DEPRICATED Create zips file with necessary content based on data set — create_instrument_meta"><meta name="description" content="Metadata can be added by editing the data dictionary of a project in the
+<!-- Generated by pkgdown: do not edit by hand --><html lang="en-US"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>DEPRECATED Create zips file with necessary content based on data set — create_instrument_meta • REDCapCAST</title><!-- favicons --><link rel="icon" type="image/png" sizes="96x96" href="../favicon-96x96.png"><link rel="icon" type="”image/svg+xml”" href="../favicon.svg"><link rel="apple-touch-icon" sizes="180x180" href="../apple-touch-icon.png"><link rel="icon" sizes="any" href="../favicon.ico"><link rel="manifest" href="../site.webmanifest"><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><meta property="og:title" content="DEPRECATED Create zips file with necessary content based on data set — create_instrument_meta"><meta name="description" content="Use export_redcap_instrument()
+Metadata can be added by editing the data dictionary of a project in the
 initial design phase. If you want to later add new instruments, this
 function can be used to create (an) instrument(s) to add to a project in
-production."><meta property="og:description" content="Metadata can be added by editing the data dictionary of a project in the
+production."><meta property="og:description" content="Use export_redcap_instrument()
+Metadata can be added by editing the data dictionary of a project in the
 initial design phase. If you want to later add new instruments, this
 function can be used to create (an) instrument(s) to add to a project in
 production."></head><body>
@@ -40,13 +42,14 @@ production."></head><body>
 <div class="row">
   <main id="main" class="col-md-9"><div class="page-header">
 
-      <h1>DEPRICATED Create zips file with necessary content based on data set</h1>
+      <h1>DEPRECATED Create zips file with necessary content based on data set</h1>
       <small class="dont-index">Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/main/R/export_redcap_instrument.R" class="external-link"><code>R/export_redcap_instrument.R</code></a></small>
       <div class="d-none name"><code>create_instrument_meta.Rd</code></div>
     </div>
 
     <div class="ref-description section level2">
-    <p>Metadata can be added by editing the data dictionary of a project in the
+    <p>Use export_redcap_instrument()
+Metadata can be added by editing the data dictionary of a project in the
 initial design phase. If you want to later add new instruments, this
 function can be used to create (an) instrument(s) to add to a project in
 production.</p>

reference/create_instrument_meta.md

@@ -1,9 +1,9 @@
-# DEPRICATED Create zips file with necessary content based on data set
+# DEPRECATED Create zips file with necessary content based on data set
 
-Metadata can be added by editing the data dictionary of a project in the
+Use export_redcap_instrument() Metadata can be added by editing the data
-initial design phase. If you want to later add new instruments, this
+dictionary of a project in the initial design phase. If you want to
-function can be used to create (an) instrument(s) to add to a project in
+later add new instruments, this function can be used to create (an)
-production.
+instrument(s) to add to a project in production.
 
 ## Usage
 

reference/export_redcap_instrument.html

@@ -54,7 +54,12 @@ production.</p>
 
     <div class="section level2">
     <h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
-    <div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">export_redcap_instrument</span><span class="op">(</span><span class="va">data</span>, <span class="va">file</span>, force <span class="op">=</span> <span class="cn">FALSE</span>, record.id <span class="op">=</span> <span class="st">"record_id"</span><span class="op">)</span></span></code></pre></div>
+    <div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">export_redcap_instrument</span><span class="op">(</span></span>
+<span>  <span class="va">data</span>,</span>
+<span>  file <span class="op">=</span> <span class="fu">here</span><span class="fu">::</span><span class="fu"><a href="https://here.r-lib.org/reference/here.html" class="external-link">here</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/paste.html" class="external-link">paste0</a></span><span class="op">(</span><span class="st">"instrument_"</span>, <span class="fu"><a href="https://rdrr.io/r/base/Sys.time.html" class="external-link">Sys.Date</a></span><span class="op">(</span><span class="op">)</span>, <span class="st">".zip"</span><span class="op">)</span><span class="op">)</span>,</span>
+<span>  force <span class="op">=</span> <span class="cn">FALSE</span>,</span>
+<span>  record.id <span class="op">=</span> <span class="st">"record_id"</span></span>
+<span><span class="op">)</span></span></code></pre></div>
     </div>
 
     <div class="section level2">

reference/export_redcap_instrument.md

@@ -8,7 +8,12 @@ production.
 ## Usage
 
 ``` r
-export_redcap_instrument(data, file, force = FALSE, record.id = "record_id")
+export_redcap_instrument(
+  data,
+  file = here::here(paste0("instrument_", Sys.Date(), ".zip")),
+  force = FALSE,
+  record.id = "record_id"
+)
 ```
 
 ## Arguments

reference/index.html

@@ -157,7 +157,7 @@
           <code><a href="create_instrument_meta.html">create_instrument_meta()</a></code>
 
         </dt>
-        <dd>DEPRICATED Create zips file with necessary content based on data set</dd>
+        <dd>DEPRECATED Create zips file with necessary content based on data set</dd>
 
         <dt>
 

reference/index.md

@@ -36,7 +36,7 @@
 - [`create_html_table()`](https://agdamsbo.github.io/REDCapCAST/reference/create_html_table.md)
   : Create two-column HTML table for data piping in REDCap instruments
 - [`create_instrument_meta()`](https://agdamsbo.github.io/REDCapCAST/reference/create_instrument_meta.md)
-  : DEPRICATED Create zips file with necessary content based on data set
+  : DEPRECATED Create zips file with necessary content based on data set
 - [`cut_string_length()`](https://agdamsbo.github.io/REDCapCAST/reference/cut_string_length.md)
   : Cut string to desired length
 - [`d2w()`](https://agdamsbo.github.io/REDCapCAST/reference/d2w.md) :

reference/strsplitx.html

@@ -82,8 +82,10 @@ easing the split around the defined delimiter, see example.</p>
 
     <div class="section level2">
     <h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
-    <div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="va">test</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"12 months follow-up"</span>, <span class="st">"3 steps"</span>, <span class="st">"mRS 6 weeks"</span>,</span></span>
+    <div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="va">test</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span></span></span>
-<span class="r-in"><span><span class="st">"Counting to 231 now"</span><span class="op">)</span></span></span>
+<span class="r-in"><span>  <span class="st">"12 months follow-up"</span>, <span class="st">"3 steps"</span>, <span class="st">"mRS 6 weeks"</span>,</span></span>
+<span class="r-in"><span>  <span class="st">"Counting to 231 now"</span></span></span>
+<span class="r-in"><span><span class="op">)</span></span></span>
 <span class="r-in"><span><span class="fu">strsplitx</span><span class="op">(</span><span class="va">test</span>, <span class="st">"[0-9]"</span>, type <span class="op">=</span> <span class="st">"around"</span><span class="op">)</span></span></span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> [[1]]</span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> [1] "1"                 "2"                 " months follow-up"</span>

reference/strsplitx.md

@@ -38,8 +38,10 @@ list
 ## Examples
 
 ``` r
-test <- c("12 months follow-up", "3 steps", "mRS 6 weeks",
+test <- c(
-"Counting to 231 now")
+  "12 months follow-up", "3 steps", "mRS 6 weeks",
+  "Counting to 231 now"
+)
 strsplitx(test, "[0-9]", type = "around")
 #> [[1]]
 #> [1] "1"                 "2"                 " months follow-up"