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reference/REDCapCAST-package.html
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@ -1,9 +1,9 @@
<!DOCTYPE html>
<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>REDCapCAST: REDCap Castellated Data Handling — REDCapCAST-package • REDCapCAST</title><!-- favicons --><link rel="icon" type="image/png" sizes="16x16" href="../favicon-16x16.png"><link rel="icon" type="image/png" sizes="32x32" href="../favicon-32x32.png"><link rel="apple-touch-icon" type="image/png" sizes="180x180" href="../apple-touch-icon.png"><link rel="apple-touch-icon" type="image/png" sizes="120x120" href="../apple-touch-icon-120x120.png"><link rel="apple-touch-icon" type="image/png" sizes="76x76" href="../apple-touch-icon-76x76.png"><link rel="apple-touch-icon" type="image/png" sizes="60x60" href="../apple-touch-icon-60x60.png"><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/font-awesome-6.4.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.4.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><meta property="og:title" content="REDCapCAST: REDCap Castellated Data Handling — REDCapCAST-package"><meta name="description" content="
Originally forked from the R part of 'REDCapRITS' by Paul Egeler. See https://github.com/pegeler/REDCapRITS. 'REDCap' database casting and handling of castellated data when using repeated instruments and longitudinal projects. Keeps a focused data export approach, by allowing to only export required data from the database. 'REDCap' (Research Electronic Data Capture) is a secure, web-based software platform designed to support data capture for research studies, providing 1) an intuitive interface for validated data capture; 2) audit trails for tracking data manipulation and export procedures; 3) automated export procedures for seamless data downloads to common statistical packages; and 4) procedures for data integration and interoperability with external sources (Harris et al (2009) doi:10.1016/j.jbi.2008.08.010
<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>REDCapCAST: REDCap Castellated Data Handling And Metadata Casting — REDCapCAST-package • REDCapCAST</title><!-- favicons --><link rel="icon" type="image/png" sizes="16x16" href="../favicon-16x16.png"><link rel="icon" type="image/png" sizes="32x32" href="../favicon-32x32.png"><link rel="apple-touch-icon" type="image/png" sizes="180x180" href="../apple-touch-icon.png"><link rel="apple-touch-icon" type="image/png" sizes="120x120" href="../apple-touch-icon-120x120.png"><link rel="apple-touch-icon" type="image/png" sizes="76x76" href="../apple-touch-icon-76x76.png"><link rel="apple-touch-icon" type="image/png" sizes="60x60" href="../apple-touch-icon-60x60.png"><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/font-awesome-6.4.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.4.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><meta property="og:title" content="REDCapCAST: REDCap Castellated Data Handling And Metadata Casting — REDCapCAST-package"><meta name="description" content="
Originally forked from the R part of 'REDCapRITS' by Paul Egeler. See https://github.com/pegeler/REDCapRITS. 'REDCap' database casting and handling of castellated data when using repeated instruments and longitudinal projects. Keeps a focused data export approach, by allowing to only export required data from the database. Also for casting new REDCap databases based on datasets from other sources. 'REDCap' (Research Electronic Data Capture) is a secure, web-based software platform designed to support data capture for research studies, providing 1) an intuitive interface for validated data capture; 2) audit trails for tracking data manipulation and export procedures; 3) automated export procedures for seamless data downloads to common statistical packages; and 4) procedures for data integration and interoperability with external sources (Harris et al (2009) doi:10.1016/j.jbi.2008.08.010
; Harris et al (2019) doi:10.1016/j.jbi.2019.103208
)."><meta property="og:description" content="
Originally forked from the R part of 'REDCapRITS' by Paul Egeler. See https://github.com/pegeler/REDCapRITS. 'REDCap' database casting and handling of castellated data when using repeated instruments and longitudinal projects. Keeps a focused data export approach, by allowing to only export required data from the database. 'REDCap' (Research Electronic Data Capture) is a secure, web-based software platform designed to support data capture for research studies, providing 1) an intuitive interface for validated data capture; 2) audit trails for tracking data manipulation and export procedures; 3) automated export procedures for seamless data downloads to common statistical packages; and 4) procedures for data integration and interoperability with external sources (Harris et al (2009) doi:10.1016/j.jbi.2008.08.010
Originally forked from the R part of 'REDCapRITS' by Paul Egeler. See https://github.com/pegeler/REDCapRITS. 'REDCap' database casting and handling of castellated data when using repeated instruments and longitudinal projects. Keeps a focused data export approach, by allowing to only export required data from the database. Also for casting new REDCap databases based on datasets from other sources. 'REDCap' (Research Electronic Data Capture) is a secure, web-based software platform designed to support data capture for research studies, providing 1) an intuitive interface for validated data capture; 2) audit trails for tracking data manipulation and export procedures; 3) automated export procedures for seamless data downloads to common statistical packages; and 4) procedures for data integration and interoperability with external sources (Harris et al (2009) doi:10.1016/j.jbi.2008.08.010
; Harris et al (2019) doi:10.1016/j.jbi.2019.103208
)."><meta property="og:image" content="https://agdamsbo.github.io/REDCapCAST/logo.png"></head><body>
<a href="#main" class="visually-hidden-focusable">Skip to contents</a>
@ -13,7 +13,7 @@ Originally forked from the R part of 'REDCapRITS' by Paul Egeler. See https://gi
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.11.1</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@ -39,14 +39,14 @@ Originally forked from the R part of 'REDCapRITS' by Paul Egeler. See https://gi
</nav><div class="container template-reference-topic">
<div class="row">
<main id="main" class="col-md-9"><div class="page-header">
<img src="../logo.png" class="logo" alt=""><h1>REDCapCAST: REDCap Castellated Data Handling</h1>
<img src="../logo.png" class="logo" alt=""><h1>REDCapCAST: REDCap Castellated Data Handling And Metadata Casting</h1>
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/REDCapCAST/blob/main/R/REDCapCAST-package.R" class="external-link"><code>R/REDCapCAST-package.R</code></a></small>
<div class="d-none name"><code>REDCapCAST-package.Rd</code></div>
</div>
<div class="ref-description section level2">
<p></p>
<p>Originally forked from the R part of 'REDCapRITS' by Paul Egeler. See <a href="https://github.com/pegeler/REDCapRITS" class="external-link">https://github.com/pegeler/REDCapRITS</a>. 'REDCap' database casting and handling of castellated data when using repeated instruments and longitudinal projects. Keeps a focused data export approach, by allowing to only export required data from the database. 'REDCap' (Research Electronic Data Capture) is a secure, web-based software platform designed to support data capture for research studies, providing 1) an intuitive interface for validated data capture; 2) audit trails for tracking data manipulation and export procedures; 3) automated export procedures for seamless data downloads to common statistical packages; and 4) procedures for data integration and interoperability with external sources (Harris et al (2009) <a href="https://doi.org/10.1016/j.jbi.2008.08.010" class="external-link">doi:10.1016/j.jbi.2008.08.010</a>
<p>Originally forked from the R part of 'REDCapRITS' by Paul Egeler. See <a href="https://github.com/pegeler/REDCapRITS" class="external-link">https://github.com/pegeler/REDCapRITS</a>. 'REDCap' database casting and handling of castellated data when using repeated instruments and longitudinal projects. Keeps a focused data export approach, by allowing to only export required data from the database. Also for casting new REDCap databases based on datasets from other sources. 'REDCap' (Research Electronic Data Capture) is a secure, web-based software platform designed to support data capture for research studies, providing 1) an intuitive interface for validated data capture; 2) audit trails for tracking data manipulation and export procedures; 3) automated export procedures for seamless data downloads to common statistical packages; and 4) procedures for data integration and interoperability with external sources (Harris et al (2009) <a href="https://doi.org/10.1016/j.jbi.2008.08.010" class="external-link">doi:10.1016/j.jbi.2008.08.010</a>
; Harris et al (2019) <a href="https://doi.org/10.1016/j.jbi.2019.103208" class="external-link">doi:10.1016/j.jbi.2019.103208</a>
).</p>
</div>

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reference/REDCap_split.html
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@ -11,7 +11,7 @@ is used to determine which fields should be included in each resultant table."><
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.11.1</small>
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reference/case_match_regex_list.html
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@ -15,7 +15,7 @@ naming."><meta property="og:image" content="https://agdamsbo.github.io/REDCapCAS
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.11.1</small>
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.11.1</small>
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
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reference/clean_redcap_name.html
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@ -11,7 +11,7 @@ Trying to make up for different naming conventions."><meta property="og:image" c
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.11.1</small>
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reference/create_instrument_meta.html
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@ -13,7 +13,7 @@ production."><meta property="og:image" content="https://agdamsbo.github.io/REDCa
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.11.1</small>
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.11.1</small>
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@ -17,7 +17,7 @@ data dictionary, but gives a few options for formatting."><meta property="og:ima
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.11.1</small>
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reference/ds2dd.html
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@ -9,7 +9,7 @@ for a more advanced function."><meta property="og:image" content="https://agdams
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.11.1</small>
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2
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@ -7,7 +7,7 @@
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.11.1</small>
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reference/easy_redcap.html
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.11.1</small>
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reference/export_redcap_instrument.html
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@ -13,7 +13,7 @@ production."><meta property="og:image" content="https://agdamsbo.github.io/REDCa
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.11.1</small>
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
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reference/get_api_key.html
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@ -7,7 +7,7 @@
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
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@ -7,7 +7,7 @@
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
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reference/guess_time_only_filter.html
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@ -13,7 +13,7 @@ has to be converted to character class before REDCap upload.'><meta property="og
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
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<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
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@ -7,7 +7,7 @@
<a class="navbar-brand me-2" href="../index.html">REDCapCAST</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">24.10.3</small>
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@ -283,12 +283,6 @@
<dd>Sanitize list of data frames</dd>
</dl><dl><dt>
<code><a href="server_factory.html">server_factory()</a></code>
</dt>
<dd>Shiny server factory</dd>
</dl><dl><dt>
<code><a href="shiny_cast.html">shiny_cast()</a></code>
</dt>
@ -311,12 +305,6 @@
</dt>
<dd>Correction based on time_only_filter function</dd>
</dl><dl><dt>
<code><a href="ui_factory.html">ui_factory()</a></code>
</dt>
<dd>UI factory for shiny app</dd>
</dl></div>
</main></div>

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@ -9,7 +9,7 @@ in keyring."><meta property="og:image" content="https://agdamsbo.github.io/REDCa
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@ -15,7 +15,7 @@ instruments."><meta property="og:image" content="https://agdamsbo.github.io/REDC
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@ -9,7 +9,7 @@ Handles longitudinal projects, but not yet repeated instruments."><meta property
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<!DOCTYPE html>
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@ -7,7 +7,7 @@
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@ -39,14 +39,22 @@
</div>
<div class="ref-description section level2">
<p>Launch the included Shiny-app for database casting and upload</p>
<p>Wraps shiny::runApp()</p>
</div>
<div class="section level2">
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">shiny_cast</span><span class="op">(</span><span class="op">)</span></span></code></pre></div>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">shiny_cast</span><span class="op">(</span><span class="va">...</span><span class="op">)</span></span></code></pre></div>
</div>
<div class="section level2">
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
<dl><dt id="arg--">...<a class="anchor" aria-label="anchor" href="#arg--"></a></dt>
<dd><p>Arguments passed to shiny::runApp()</p></dd>
</dl></div>
<div class="section level2">
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
<p>shiny app</p>

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