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Deploying to gh-pages from @ agdamsbo/REDCapCAST@10064d7ee0 🚀
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agdamsbo
parent
73d90113c9
commit
3560381c91
11 changed files with 59 additions and 34 deletions
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@ -57,7 +57,7 @@
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<span> field.label.attr <span class="op">=</span> <span class="st">"label"</span>,</span>
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<span> field.validation <span class="op">=</span> <span class="cn">NULL</span>,</span>
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<span> metadata <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/names.html" class="external-link">names</a></span><span class="op">(</span><span class="fu">REDCapCAST</span><span class="fu">::</span><span class="va"><a href="redcapcast_meta.html">redcapcast_meta</a></span><span class="op">)</span>,</span>
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<span> convert.logicals <span class="op">=</span> <span class="cn">TRUE</span></span>
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<span> convert.logicals <span class="op">=</span> <span class="cn">FALSE</span></span>
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<span><span class="op">)</span></span></code></pre></div>
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</div>
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@ -165,8 +165,8 @@ Please, do always inspect the data dictionary before upload.</p>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># ℹ 15 more rows</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># ℹ 16 more variables: cohabitation <chr>, hypertension <chr>, diabetes <chr>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># region <chr>, baseline_data_start_complete <chr>, mrs_assessed <chr>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># mrs_date <date>, mrs_score <dbl>, mrs_complete <chr>, con_mrs <dbl>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># con_calc <dbl>, consensus_complete <chr>, event_datetime <dttm>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># mrs_date <date>, mrs_score <dbl>, mrs_complete <chr>, con_mrs <lgl>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># con_calc <lgl>, consensus_complete <chr>, event_datetime <dttm>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># event_age <dbl>, event_type <chr>, new_event_complete <chr></span></span>
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<span class="r-out co"><span class="r-pr">#></span> </span>
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<span class="r-out co"><span class="r-pr">#></span> $meta</span>
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@ -184,7 +184,7 @@ Please, do always inspect the data dictionary before upload.</p>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 9</span> cohabitation data <span style="color: #BB0000;">NA</span> text cohabitation </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">10</span> hypertension data <span style="color: #BB0000;">NA</span> text hypertension </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># ℹ 14 more rows</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># ℹ 13 more variables: select_choices_or_calculations <chr>, field_note <lgl>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># ℹ 13 more variables: select_choices_or_calculations <lgl>, field_note <lgl>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># text_validation_type_or_show_slider_number <chr>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># text_validation_min <lgl>, text_validation_max <lgl>, identifier <lgl>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># branching_logic <lgl>, required_field <lgl>, custom_alignment <lgl>,</span></span>
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@ -242,21 +242,24 @@ Please, do always inspect the data dictionary before upload.</p>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># A tibble: 6 × 18</span></span>
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<span class="r-out co"><span class="r-pr">#></span> field_name form_name section_header field_type field_label </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><lgl></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><chr></span> </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">1</span> record_id c <span style="color: #BB0000;">NA</span> text record_id </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">1</span> record_id b <span style="color: #BB0000;">NA</span> text record_id </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">2</span> sepallength b <span style="color: #BB0000;">NA</span> text Sepal.Length</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">3</span> sepalwidth b <span style="color: #BB0000;">NA</span> text Sepal.Width </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">4</span> petallength b <span style="color: #BB0000;">NA</span> text Petal.Length</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">5</span> petalwidth c <span style="color: #BB0000;">NA</span> text Petal.Width </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">6</span> species b <span style="color: #BB0000;">NA</span> radio Species </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">3</span> sepalwidth c <span style="color: #BB0000;">NA</span> text Sepal.Width </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">4</span> petallength c <span style="color: #BB0000;">NA</span> text Petal.Length</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">5</span> petalwidth b <span style="color: #BB0000;">NA</span> text Petal.Width </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">6</span> species c <span style="color: #BB0000;">NA</span> radio Species </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># ℹ 13 more variables: select_choices_or_calculations <chr>, field_note <lgl>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># text_validation_type_or_show_slider_number <chr>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># text_validation_min <lgl>, text_validation_max <lgl>, identifier <lgl>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># branching_logic <lgl>, required_field <lgl>, custom_alignment <lgl>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># question_number <lgl>, matrix_group_name <lgl>, matrix_ranking <lgl>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># field_annotation <lgl></span></span>
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<span class="r-in"><span><span class="va">mtcars</span> <span class="op">|></span> <span class="fu"><a href="numchar2fct.html">numchar2fct</a></span><span class="op">(</span><span class="op">)</span> <span class="op">|></span> <span class="fu">ds2dd_detailed</span><span class="op">(</span>add.auto.id <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span></span></span>
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<span class="r-in"><span><span class="va">mtcars</span> <span class="op">|></span></span></span>
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<span class="r-in"><span> <span class="fu">dplyr</span><span class="fu">::</span><span class="fu"><a href="https://dplyr.tidyverse.org/reference/mutate.html" class="external-link">mutate</a></span><span class="op">(</span>unknown <span class="op">=</span> <span class="cn">NA</span><span class="op">)</span> <span class="op">|></span></span></span>
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<span class="r-in"><span> <span class="fu"><a href="numchar2fct.html">numchar2fct</a></span><span class="op">(</span><span class="op">)</span> <span class="op">|></span></span></span>
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<span class="r-in"><span> <span class="fu">ds2dd_detailed</span><span class="op">(</span>add.auto.id <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span></span></span>
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<span class="r-out co"><span class="r-pr">#></span> $data</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># A tibble: 32 × 12</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># A tibble: 32 × 13</span></span>
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<span class="r-out co"><span class="r-pr">#></span> record_id mpg cyl disp hp drat wt qsec vs am gear carb</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494; font-style: italic;"><int></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 1</span> 1 21 2 160 110 3.9 2.62 16.5 1 2 2 4</span>
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@ -270,9 +273,10 @@ Please, do always inspect the data dictionary before upload.</p>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 9</span> 9 22.8 1 141. 95 3.92 3.15 22.9 2 1 2 2</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">10</span> 10 19.2 2 168. 123 3.92 3.44 18.3 2 1 2 4</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># ℹ 22 more rows</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># ℹ 1 more variable: unknown <lgl></span></span>
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<span class="r-out co"><span class="r-pr">#></span> </span>
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<span class="r-out co"><span class="r-pr">#></span> $meta</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># A tibble: 12 × 18</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># A tibble: 13 × 18</span></span>
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<span class="r-out co"><span class="r-pr">#></span> field_name form_name section_header field_type field_label</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><lgl></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><chr></span> </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 1</span> record_id data <span style="color: #BB0000;">NA</span> text record_id </span>
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@ -287,6 +291,7 @@ Please, do always inspect the data dictionary before upload.</p>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">10</span> am data <span style="color: #BB0000;">NA</span> radio am </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">11</span> gear data <span style="color: #BB0000;">NA</span> radio gear </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">12</span> carb data <span style="color: #BB0000;">NA</span> radio carb </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">13</span> unknown data <span style="color: #BB0000;">NA</span> truefalse unknown </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># ℹ 13 more variables: select_choices_or_calculations <chr>, field_note <lgl>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># text_validation_type_or_show_slider_number <chr>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># text_validation_min <lgl>, text_validation_max <lgl>, identifier <lgl>,</span></span>
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@ -324,12 +329,12 @@ Please, do always inspect the data dictionary before upload.</p>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># A tibble: 6 × 18</span></span>
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<span class="r-out co"><span class="r-pr">#></span> field_name form_name section_header field_type field_label</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><lgl></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><chr></span> </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">1</span> record_id b <span style="color: #BB0000;">NA</span> text record_id </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">2</span> sepallength b <span style="color: #BB0000;">NA</span> text sepallength</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">1</span> record_id a <span style="color: #BB0000;">NA</span> text record_id </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">2</span> sepallength a <span style="color: #BB0000;">NA</span> text sepallength</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">3</span> sepalwidth b <span style="color: #BB0000;">NA</span> text sepalwidth </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">4</span> petallength a <span style="color: #BB0000;">NA</span> text petallength</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">5</span> petalwidth b <span style="color: #BB0000;">NA</span> text petalwidth </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">6</span> species b <span style="color: #BB0000;">NA</span> text species </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">4</span> petallength b <span style="color: #BB0000;">NA</span> text petallength</span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">5</span> petalwidth a <span style="color: #BB0000;">NA</span> text petalwidth </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">6</span> species a <span style="color: #BB0000;">NA</span> text species </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># ℹ 13 more variables: select_choices_or_calculations <lgl>, field_note <lgl>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># text_validation_type_or_show_slider_number <chr>,</span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># text_validation_min <lgl>, text_validation_max <lgl>, identifier <lgl>,</span></span>
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