mirror of
https://github.com/agdamsbo/REDCapCAST.git
synced 2026-06-19 13:17:30 +02:00
Deploying to gh-pages from @ agdamsbo/REDCapCAST@10064d7ee0 🚀
This commit is contained in:
parent
73d90113c9
commit
3560381c91
11 changed files with 59 additions and 34 deletions
|
|
@ -107,6 +107,12 @@ interpreted as TRUE.</p></dd>
|
|||
<span class="r-out co"><span class="r-pr">#></span> "logical" "logical" "numeric" "factor" </span>
|
||||
<span class="r-in"><span><span class="va">ds</span><span class="op">$</span><span class="va">A</span> <span class="op">|></span> <span class="fu"><a href="https://rdrr.io/r/base/class.html" class="external-link">class</a></span><span class="op">(</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] "factor"</span>
|
||||
<span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/sample.html" class="external-link">sample</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"TRUE"</span>,<span class="cn">NA</span><span class="op">)</span>, <span class="fl">20</span>, <span class="cn">TRUE</span><span class="op">)</span> <span class="op">|></span></span></span>
|
||||
<span class="r-in"><span> <span class="fu">as_logical</span><span class="op">(</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] NA NA TRUE NA NA NA NA NA TRUE TRUE TRUE NA TRUE TRUE TRUE</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [16] TRUE NA TRUE TRUE TRUE</span>
|
||||
<span class="r-in"><span><span class="fu">as_logical</span><span class="op">(</span><span class="fl">0</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] FALSE</span>
|
||||
</code></pre></div>
|
||||
</div>
|
||||
</main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>
|
||||
|
|
|
|||
|
|
@ -82,7 +82,7 @@
|
|||
<span class="r-in"><span><span class="st">"test"</span> <span class="op">|></span> <span class="fu">compact_vec</span><span class="op">(</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] "test"</span>
|
||||
<span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/sample.html" class="external-link">sample</a></span><span class="op">(</span><span class="va">letters</span><span class="op">[</span><span class="fl">1</span><span class="op">:</span><span class="fl">9</span><span class="op">]</span>, <span class="fl">20</span>, <span class="cn">TRUE</span><span class="op">)</span> <span class="op">|></span> <span class="fu">compact_vec</span><span class="op">(</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] "b; e; g; a; d; g; g; h; b; h; i; c; i; f; i; e; c; b; g; d"</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] "i; e; c; b; g; d; d; b; i; b; c; c; a; g; e; d; a; c; g; a"</span>
|
||||
</code></pre></div>
|
||||
</div>
|
||||
</main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>
|
||||
|
|
|
|||
|
|
@ -111,7 +111,7 @@ names(REDCapCAST::redcapcast_meta).</p></dd>
|
|||
<div class="section level2">
|
||||
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
|
||||
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="va">redcapcast_data</span><span class="op">$</span><span class="va">record_id</span> <span class="op"><-</span> <span class="fu"><a href="https://rdrr.io/r/base/seq.html" class="external-link">seq_len</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/nrow.html" class="external-link">nrow</a></span><span class="op">(</span><span class="va">redcapcast_data</span><span class="op">)</span><span class="op">)</span></span></span>
|
||||
<span class="r-in"><span><span class="fu">ds2dd</span><span class="op">(</span><span class="va">redcapcast_data</span>, include.column.names<span class="op">=</span><span class="cn">TRUE</span><span class="op">)</span></span></span>
|
||||
<span class="r-in"><span><span class="fu">ds2dd</span><span class="op">(</span><span class="va">redcapcast_data</span>, include.column.names <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> $DataDictionary</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> field_name form_name section_header field_type</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 1 record_id basis NA text</span>
|
||||
|
|
|
|||
|
|
@ -57,7 +57,7 @@
|
|||
<span> field.label.attr <span class="op">=</span> <span class="st">"label"</span>,</span>
|
||||
<span> field.validation <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
||||
<span> metadata <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/names.html" class="external-link">names</a></span><span class="op">(</span><span class="fu">REDCapCAST</span><span class="fu">::</span><span class="va"><a href="redcapcast_meta.html">redcapcast_meta</a></span><span class="op">)</span>,</span>
|
||||
<span> convert.logicals <span class="op">=</span> <span class="cn">TRUE</span></span>
|
||||
<span> convert.logicals <span class="op">=</span> <span class="cn">FALSE</span></span>
|
||||
<span><span class="op">)</span></span></code></pre></div>
|
||||
</div>
|
||||
|
||||
|
|
@ -165,8 +165,8 @@ Please, do always inspect the data dictionary before upload.</p>
|
|||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># ℹ 15 more rows</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># ℹ 16 more variables: cohabitation <chr>, hypertension <chr>, diabetes <chr>,</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># region <chr>, baseline_data_start_complete <chr>, mrs_assessed <chr>,</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># mrs_date <date>, mrs_score <dbl>, mrs_complete <chr>, con_mrs <dbl>,</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># con_calc <dbl>, consensus_complete <chr>, event_datetime <dttm>,</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># mrs_date <date>, mrs_score <dbl>, mrs_complete <chr>, con_mrs <lgl>,</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># con_calc <lgl>, consensus_complete <chr>, event_datetime <dttm>,</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># event_age <dbl>, event_type <chr>, new_event_complete <chr></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> $meta</span>
|
||||
|
|
@ -184,7 +184,7 @@ Please, do always inspect the data dictionary before upload.</p>
|
|||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 9</span> cohabitation data <span style="color: #BB0000;">NA</span> text cohabitation </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">10</span> hypertension data <span style="color: #BB0000;">NA</span> text hypertension </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># ℹ 14 more rows</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># ℹ 13 more variables: select_choices_or_calculations <chr>, field_note <lgl>,</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># ℹ 13 more variables: select_choices_or_calculations <lgl>, field_note <lgl>,</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># text_validation_type_or_show_slider_number <chr>,</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># text_validation_min <lgl>, text_validation_max <lgl>, identifier <lgl>,</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># branching_logic <lgl>, required_field <lgl>, custom_alignment <lgl>,</span></span>
|
||||
|
|
@ -242,21 +242,24 @@ Please, do always inspect the data dictionary before upload.</p>
|
|||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># A tibble: 6 × 18</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> field_name form_name section_header field_type field_label </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><lgl></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><chr></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">1</span> record_id c <span style="color: #BB0000;">NA</span> text record_id </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">1</span> record_id b <span style="color: #BB0000;">NA</span> text record_id </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">2</span> sepallength b <span style="color: #BB0000;">NA</span> text Sepal.Length</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">3</span> sepalwidth b <span style="color: #BB0000;">NA</span> text Sepal.Width </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">4</span> petallength b <span style="color: #BB0000;">NA</span> text Petal.Length</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">5</span> petalwidth c <span style="color: #BB0000;">NA</span> text Petal.Width </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">6</span> species b <span style="color: #BB0000;">NA</span> radio Species </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">3</span> sepalwidth c <span style="color: #BB0000;">NA</span> text Sepal.Width </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">4</span> petallength c <span style="color: #BB0000;">NA</span> text Petal.Length</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">5</span> petalwidth b <span style="color: #BB0000;">NA</span> text Petal.Width </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">6</span> species c <span style="color: #BB0000;">NA</span> radio Species </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># ℹ 13 more variables: select_choices_or_calculations <chr>, field_note <lgl>,</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># text_validation_type_or_show_slider_number <chr>,</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># text_validation_min <lgl>, text_validation_max <lgl>, identifier <lgl>,</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># branching_logic <lgl>, required_field <lgl>, custom_alignment <lgl>,</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># question_number <lgl>, matrix_group_name <lgl>, matrix_ranking <lgl>,</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># field_annotation <lgl></span></span>
|
||||
<span class="r-in"><span><span class="va">mtcars</span> <span class="op">|></span> <span class="fu"><a href="numchar2fct.html">numchar2fct</a></span><span class="op">(</span><span class="op">)</span> <span class="op">|></span> <span class="fu">ds2dd_detailed</span><span class="op">(</span>add.auto.id <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span></span></span>
|
||||
<span class="r-in"><span><span class="va">mtcars</span> <span class="op">|></span></span></span>
|
||||
<span class="r-in"><span> <span class="fu">dplyr</span><span class="fu">::</span><span class="fu"><a href="https://dplyr.tidyverse.org/reference/mutate.html" class="external-link">mutate</a></span><span class="op">(</span>unknown <span class="op">=</span> <span class="cn">NA</span><span class="op">)</span> <span class="op">|></span></span></span>
|
||||
<span class="r-in"><span> <span class="fu"><a href="numchar2fct.html">numchar2fct</a></span><span class="op">(</span><span class="op">)</span> <span class="op">|></span></span></span>
|
||||
<span class="r-in"><span> <span class="fu">ds2dd_detailed</span><span class="op">(</span>add.auto.id <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> $data</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># A tibble: 32 × 12</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># A tibble: 32 × 13</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> record_id mpg cyl disp hp drat wt qsec vs am gear carb</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494; font-style: italic;"><int></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 1</span> 1 21 2 160 110 3.9 2.62 16.5 1 2 2 4</span>
|
||||
|
|
@ -270,9 +273,10 @@ Please, do always inspect the data dictionary before upload.</p>
|
|||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 9</span> 9 22.8 1 141. 95 3.92 3.15 22.9 2 1 2 2</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">10</span> 10 19.2 2 168. 123 3.92 3.44 18.3 2 1 2 4</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># ℹ 22 more rows</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># ℹ 1 more variable: unknown <lgl></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> $meta</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># A tibble: 12 × 18</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># A tibble: 13 × 18</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> field_name form_name section_header field_type field_label</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><lgl></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><chr></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 1</span> record_id data <span style="color: #BB0000;">NA</span> text record_id </span>
|
||||
|
|
@ -287,6 +291,7 @@ Please, do always inspect the data dictionary before upload.</p>
|
|||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">10</span> am data <span style="color: #BB0000;">NA</span> radio am </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">11</span> gear data <span style="color: #BB0000;">NA</span> radio gear </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">12</span> carb data <span style="color: #BB0000;">NA</span> radio carb </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">13</span> unknown data <span style="color: #BB0000;">NA</span> truefalse unknown </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># ℹ 13 more variables: select_choices_or_calculations <chr>, field_note <lgl>,</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># text_validation_type_or_show_slider_number <chr>,</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># text_validation_min <lgl>, text_validation_max <lgl>, identifier <lgl>,</span></span>
|
||||
|
|
@ -324,12 +329,12 @@ Please, do always inspect the data dictionary before upload.</p>
|
|||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># A tibble: 6 × 18</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> field_name form_name section_header field_type field_label</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><lgl></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><chr></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">1</span> record_id b <span style="color: #BB0000;">NA</span> text record_id </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">2</span> sepallength b <span style="color: #BB0000;">NA</span> text sepallength</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">1</span> record_id a <span style="color: #BB0000;">NA</span> text record_id </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">2</span> sepallength a <span style="color: #BB0000;">NA</span> text sepallength</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">3</span> sepalwidth b <span style="color: #BB0000;">NA</span> text sepalwidth </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">4</span> petallength a <span style="color: #BB0000;">NA</span> text petallength</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">5</span> petalwidth b <span style="color: #BB0000;">NA</span> text petalwidth </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">6</span> species b <span style="color: #BB0000;">NA</span> text species </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">4</span> petallength b <span style="color: #BB0000;">NA</span> text petallength</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">5</span> petalwidth a <span style="color: #BB0000;">NA</span> text petalwidth </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">6</span> species a <span style="color: #BB0000;">NA</span> text species </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># ℹ 13 more variables: select_choices_or_calculations <lgl>, field_note <lgl>,</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># text_validation_type_or_show_slider_number <chr>,</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># text_validation_min <lgl>, text_validation_max <lgl>, identifier <lgl>,</span></span>
|
||||
|
|
|
|||
|
|
@ -45,7 +45,14 @@
|
|||
|
||||
<div class="section level2">
|
||||
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
|
||||
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">easy_redcap</span><span class="op">(</span><span class="va">project.name</span>, widen.data <span class="op">=</span> <span class="cn">TRUE</span>, <span class="va">uri</span>, raw_or_label <span class="op">=</span> <span class="st">"both"</span>, <span class="va">...</span><span class="op">)</span></span></code></pre></div>
|
||||
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">easy_redcap</span><span class="op">(</span></span>
|
||||
<span> <span class="va">project.name</span>,</span>
|
||||
<span> <span class="va">uri</span>,</span>
|
||||
<span> raw_or_label <span class="op">=</span> <span class="st">"both"</span>,</span>
|
||||
<span> data_format <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"wide"</span>, <span class="st">"list"</span>, <span class="st">"redcap"</span>, <span class="st">"long"</span><span class="op">)</span>,</span>
|
||||
<span> widen.data <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
||||
<span> <span class="va">...</span></span>
|
||||
<span><span class="op">)</span></span></code></pre></div>
|
||||
</div>
|
||||
|
||||
<div class="section level2">
|
||||
|
|
@ -57,10 +64,6 @@
|
|||
<a href="https://keyring.r-lib.org/reference/key_get.html" class="external-link">key_set</a>, using the default keyring)</p></dd>
|
||||
|
||||
|
||||
<dt id="arg-widen-data">widen.data<a class="anchor" aria-label="anchor" href="#arg-widen-data"></a></dt>
|
||||
<dd><p>argument to widen the exported data</p></dd>
|
||||
|
||||
|
||||
<dt id="arg-uri">uri<a class="anchor" aria-label="anchor" href="#arg-uri"></a></dt>
|
||||
<dd><p>REDCap database API uri</p></dd>
|
||||
|
||||
|
|
@ -71,6 +74,15 @@
|
|||
data.</p></dd>
|
||||
|
||||
|
||||
<dt id="arg-data-format">data_format<a class="anchor" aria-label="anchor" href="#arg-data-format"></a></dt>
|
||||
<dd><p>Choose the data</p></dd>
|
||||
|
||||
|
||||
<dt id="arg-widen-data">widen.data<a class="anchor" aria-label="anchor" href="#arg-widen-data"></a></dt>
|
||||
<dd><p>argument to widen the exported data. [DEPRECATED], use
|
||||
`data_format`instead</p></dd>
|
||||
|
||||
|
||||
<dt id="arg--">...<a class="anchor" aria-label="anchor" href="#arg--"></a></dt>
|
||||
<dd><p>arguments passed on to <a href="read_redcap_tables.html">read_redcap_tables</a>.</p></dd>
|
||||
|
||||
|
|
|
|||
|
|
@ -70,8 +70,8 @@ coerce to a factor.</p>
|
|||
|
||||
<div class="section level2">
|
||||
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
|
||||
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="fu">format_redcap_factor</span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/sample.html" class="external-link">sample</a></span><span class="op">(</span><span class="fl">1</span><span class="op">:</span><span class="fl">3</span>,<span class="fl">20</span>,<span class="cn">TRUE</span><span class="op">)</span>,<span class="st">"1, First. | 2, second | 3, THIRD"</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 1 3 1 1 3 3 1 2 3 3 3 2 2 1 3 2 2 1 2 1</span>
|
||||
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="fu">format_redcap_factor</span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/sample.html" class="external-link">sample</a></span><span class="op">(</span><span class="fl">1</span><span class="op">:</span><span class="fl">3</span>, <span class="fl">20</span>, <span class="cn">TRUE</span><span class="op">)</span>, <span class="st">"1, First. | 2, second | 3, THIRD"</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 2 2 1 2 1 2 3 1 2 2 2 1 1 3 2 1 2 3 1 1</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> attr(,"labels")</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> First. second THIRD </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> "1" "2" "3" </span>
|
||||
|
|
|
|||
|
|
@ -71,7 +71,7 @@ Will preserve metadata in the data.frames as labels.</p>
|
|||
<span> events <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
||||
<span> forms <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
||||
<span> raw_or_label <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"raw"</span>, <span class="st">"label"</span>, <span class="st">"both"</span><span class="op">)</span>,</span>
|
||||
<span> split_forms <span class="op">=</span> <span class="st">"all"</span>,</span>
|
||||
<span> split_forms <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"all"</span>, <span class="st">"repeating"</span>, <span class="st">"none"</span><span class="op">)</span>,</span>
|
||||
<span> <span class="va">...</span></span>
|
||||
<span><span class="op">)</span></span></code></pre></div>
|
||||
</div>
|
||||
|
|
@ -117,7 +117,7 @@ Will preserve metadata in the data.frames as labels.</p>
|
|||
|
||||
<dt id="arg-split-forms">split_forms<a class="anchor" aria-label="anchor" href="#arg-split-forms"></a></dt>
|
||||
<dd><p>Whether to split "repeating" or "all" forms, default is
|
||||
all.</p></dd>
|
||||
all. Give "none" to export native semi-long REDCap format</p></dd>
|
||||
|
||||
|
||||
<dt id="arg--">...<a class="anchor" aria-label="anchor" href="#arg--"></a></dt>
|
||||
|
|
|
|||
|
|
@ -73,16 +73,16 @@ factoring, but levels character vectors in order of appearance.</p>
|
|||
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/sample.html" class="external-link">sample</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/seq.html" class="external-link">seq_len</a></span><span class="op">(</span><span class="fl">4</span><span class="op">)</span>, <span class="fl">20</span>, <span class="cn">TRUE</span><span class="op">)</span> <span class="op">|></span></span></span>
|
||||
<span class="r-in"><span> <span class="fu">var2fct</span><span class="op">(</span><span class="fl">6</span><span class="op">)</span> <span class="op">|></span></span></span>
|
||||
<span class="r-in"><span> <span class="fu"><a href="https://rdrr.io/r/base/summary.html" class="external-link">summary</a></span><span class="op">(</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 1 2 3 4 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 8 1 9 2 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 1 2 3 4 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 2 1 7 10 </span>
|
||||
<span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/sample.html" class="external-link">sample</a></span><span class="op">(</span><span class="va">letters</span>, <span class="fl">20</span><span class="op">)</span> <span class="op">|></span></span></span>
|
||||
<span class="r-in"><span> <span class="fu">var2fct</span><span class="op">(</span><span class="fl">6</span><span class="op">)</span> <span class="op">|></span></span></span>
|
||||
<span class="r-in"><span> <span class="fu"><a href="https://rdrr.io/r/base/summary.html" class="external-link">summary</a></span><span class="op">(</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Length Class Mode </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> 20 character character </span>
|
||||
<span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/sample.html" class="external-link">sample</a></span><span class="op">(</span><span class="va">letters</span><span class="op">[</span><span class="fl">1</span><span class="op">:</span><span class="fl">4</span><span class="op">]</span>, <span class="fl">20</span>, <span class="cn">TRUE</span><span class="op">)</span> <span class="op">|></span> <span class="fu">var2fct</span><span class="op">(</span><span class="fl">6</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] b a a c a d c d c c d d c a d a a a b c</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Levels: b a c d</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] c c d b c d b c b c b b b b b a c d b b</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Levels: c d b a</span>
|
||||
</code></pre></div>
|
||||
</div>
|
||||
</main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>
|
||||
|
|
|
|||
Loading…
Add table
Add a link
Reference in a new issue