updated covr action

This commit is contained in:
Andreas Gammelgaard Damsbo 2025-02-25 10:45:51 +01:00
commit 319ccfd9dd
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2 changed files with 21 additions and 12 deletions

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@ -4,9 +4,10 @@ on:
push:
branches: [main, master]
pull_request:
branches: [main, master]
name: test-coverage
name: test-coverage.yaml
permissions: read-all
jobs:
test-coverage:
@ -15,38 +16,47 @@ jobs:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v3
- uses: actions/checkout@v4
- uses: r-lib/actions/setup-r@v2
with:
use-public-rspm: true
# - uses: r-lib/actions/setup-renv@v2
- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::covr
extra-packages: any::covr, any::xml2
needs: coverage
- name: Test coverage
run: |
covr::codecov(
cov <- covr::package_coverage(
quiet = FALSE,
clean = FALSE,
install_path = file.path(Sys.getenv("RUNNER_TEMP"), "package")
install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package")
)
print(cov)
covr::to_cobertura(cov)
shell: Rscript {0}
- uses: codecov/codecov-action@v4
with:
# Fail if error if not on PR, or if on PR and token is given
fail_ci_if_error: ${{ github.event_name != 'pull_request' || secrets.CODECOV_TOKEN }}
file: ./cobertura.xml
plugin: noop
disable_search: true
token: ${{ secrets.CODECOV_TOKEN }}
- name: Show testthat output
if: always()
run: |
## --------------------------------------------------------------------
find ${{ runner.temp }}/package -name 'testthat.Rout*' -exec cat '{}' \; || true
find '${{ runner.temp }}/package' -name 'testthat.Rout*' -exec cat '{}' \; || true
shell: bash
- name: Upload test results
if: failure()
uses: actions/upload-artifact@v3
uses: actions/upload-artifact@v4
with:
name: coverage-test-failures
path: ${{ runner.temp }}/package