transfer from old repo

apps/shinyDAG-1.0.0/dev/Dockerfile

@@ -0,0 +1,95 @@
+# shiny-verse:3.6.0
+FROM rocker/verse:3.5.3
+
+RUN apt-get update -qq && apt-get -y --no-install-recommends install \
+  libxml2-dev \
+  libcairo2-dev \
+  libsqlite3-dev \
+  libmariadbd-dev \
+  libmariadb-client-lgpl-dev \
+  libpq-dev \
+  libssl-dev \
+  libcurl4-openssl-dev \
+  libssh2-1-dev \
+  unixodbc-dev \
+  && install2.r --error \
+    --deps TRUE \
+    tidyverse \
+    dplyr \
+    devtools \
+    formatR \
+    remotes \
+    selectr \
+    caTools \
+    BiocManager
+
+LABEL maintainer="Travis Gerke (Travis.Gerke@moffitt.org)"
+
+# Install system dependencies for required packages
+RUN apt-get update -qq && apt-get -y --no-install-recommends install \
+  libssl-dev \
+  libxml2-dev \
+  libmagick++-dev \
+  libv8-3.14-dev \
+  libglu1-mesa-dev \
+  freeglut3-dev \
+  mesa-common-dev \
+  libudunits2-dev \
+  libpoppler-cpp-dev \
+  libwebp-dev \
+  && apt-get clean \
+  && rm -rf /var/lib/apt/lists/ \
+  && rm -rf /tmp/downloaded_packages/ /tmp/*.rds
+  
+RUN install2.r --error --deps TRUE \
+  shinyAce \
+  shinydashboard \
+  shinyWidgets \
+  DiagrammeR \
+  ggdag \
+  igraph \
+  pdftools \
+  shinyBS \
+  && rm -rf /tmp/downloaded_packages/ /tmp/*.rds
+  
+RUN Rscript -e "devtools::install_github('metrumresearchgroup/texPreview', ref = 'e954322')" \
+  && rm -rf /tmp/downloaded_packages/ /tmp/*.rds
+
+# Install TinyTeX
+RUN install2.r --error tinytex \
+  && export CTAN_REPO="http://mirror.las.iastate.edu/tex-archive/systems/texlive/tlnet" \
+  && wget -qO- \ 
+     "https://github.com/yihui/tinytex/raw/master/tools/install-unx.sh" | \ 
+     sh -s - --admin --no-path \
+  && mv ~/.TinyTeX /opt/TinyTeX \
+  && /opt/TinyTeX/bin/*/tlmgr path add \ 
+  && tlmgr update --self \
+  && tlmgr install metafont mfware inconsolata tex ae parskip listings \ 
+  && tlmgr install standalone varwidth xcolor colortbl multirow psnfss setspace pgf \
+  && tlmgr path add \ 
+  && Rscript -e "tinytex::r_texmf()" \ 
+  && chown -R root:staff /opt/TinyTeX \ 
+  && chmod -R a+w /opt/TinyTeX \ 
+  && chmod -R a+wx /opt/TinyTeX/bin \ 
+  && echo "PATH=${PATH}" >> /usr/local/lib/R/etc/Renviron \
+  && rm -rf /tmp/downloaded_packages/ /tmp/*.rds
+  
+RUN install2.r --error --deps TRUE shinyjs \
+  && rm -rf /tmp/downloaded_packages/ /tmp/*.rds
+
+RUN install2.r --error plotly \
+  && rm -rf /tmp/downloaded_packages/ /tmp/*.rds
+  
+RUN install2.r --error shinycssloaders \
+  && rm -rf /tmp/downloaded_packages/ /tmp/*.rds
+
+ARG TRIGGER_UPDATE=unknown
+RUN installGithub.r gadenbuie/grkstyle r-lib/styler 
+
+RUN installGithub.r gadenbuie/shinyThings@undo \
+  && rm -rf /tmp/downloaded_packages/ /tmp/*.rds
+
+#ARG SHINY_APP_IDLE_TIMEOUT=600
+#RUN sed -i "s/directory_index on;/app_idle_timeout ${SHINY_APP_IDLE_TIMEOUT};/g" /etc/shiny-server/shiny-server.conf
+#COPY . /srv/shiny-server/shinyDAG
+#RUN chown -R shiny:shiny /srv/shiny-server/