diff --git a/CODE_OF_CONDUCT.html b/CODE_OF_CONDUCT.html index df98c7a0..7e9695a2 100644 --- a/CODE_OF_CONDUCT.html +++ b/CODE_OF_CONDUCT.html @@ -38,7 +38,7 @@
diff --git a/LICENSE.html b/LICENSE.html index 91572b9c..2d89ed3e 100644 --- a/LICENSE.html +++ b/LICENSE.html @@ -38,7 +38,7 @@
diff --git a/QA.html b/QA.html index 51ed05c3..85ddb94a 100644 --- a/QA.html +++ b/QA.html @@ -38,7 +38,7 @@
diff --git a/ROADMAP.html b/ROADMAP.html index 69d76d30..bb442ee1 100644 --- a/ROADMAP.html +++ b/ROADMAP.html @@ -38,7 +38,7 @@
diff --git a/SESSION.html b/SESSION.html index 494de17f..8bce7fe7 100644 --- a/SESSION.html +++ b/SESSION.html @@ -38,12 +38,12 @@
- +
——————————– R environment ———————————
|setting |value | |:———–|:——————————————| |version |R version 4.5.2 (2025-10-31) | |os |macOS Tahoe 26.3 | |system |aarch64, darwin20 | |ui |RStudio | |language |(EN) | |collate |en_US.UTF-8 | |ctype |en_US.UTF-8 | |tz |Europe/Copenhagen | |date |2026-02-28 | |rstudio |2026.01.1+403 Apple Blossom (desktop) | |pandoc |3.6.4 @ /opt/homebrew/bin/ (via rmarkdown) | |quarto |1.7.30 @ /usr/local/bin/quarto | |FreesearchR |26.3.1.260228 |
|setting |value | |:———–|:——————————————| |version |R version 4.5.2 (2025-10-31) | |os |macOS Tahoe 26.3 | |system |aarch64, darwin20 | |ui |RStudio | |language |(EN) | |collate |en_US.UTF-8 | |ctype |en_US.UTF-8 | |tz |Europe/Copenhagen | |date |2026-03-02 | |rstudio |2026.01.1+403 Apple Blossom (desktop) | |pandoc |3.6.4 @ /opt/homebrew/bin/ (via rmarkdown) | |quarto |1.7.30 @ /usr/local/bin/quarto | |FreesearchR |26.3.1.260302 |

———————————– packages ———————————–

@@ -134,46 +134,46 @@ - + + + + + - + - + - + - + - + - + - + - + - - - - @@ -314,86 +314,78 @@ - - - - - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - - - - @@ -418,22 +410,22 @@ - + + + + + - + - + - - - - @@ -518,102 +510,102 @@ - - - - - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + + + + + @@ -810,26 +802,18 @@ - - - - - + - + - + - - - - @@ -838,47 +822,51 @@ - + + + + + - + - + - + - + - + - + - + - + - + - + diff --git a/SESSION.md b/SESSION.md index 4b3054d7..2dd10426 100644 --- a/SESSION.md +++ b/SESSION.md @@ -2,7 +2,7 @@ | ——————————– R environment ——————————— | |--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------| -| \|setting \|value \| \|:———–\|:——————————————\| \|version \|R version 4.5.2 (2025-10-31) \| \|os \|macOS Tahoe 26.3 \| \|system \|aarch64, darwin20 \| \|ui \|RStudio \| \|language \|(EN) \| \|collate \|en_US.UTF-8 \| \|ctype \|en_US.UTF-8 \| \|tz \|Europe/Copenhagen \| \|date \|2026-02-28 \| \|rstudio \|2026.01.1+403 Apple Blossom (desktop) \| \|pandoc \|3.6.4 @ /opt/homebrew/bin/ (via rmarkdown) \| \|quarto \|1.7.30 @ /usr/local/bin/quarto \| \|FreesearchR \|26.3.1.260228 \| | +| \|setting \|value \| \|:———–\|:——————————————\| \|version \|R version 4.5.2 (2025-10-31) \| \|os \|macOS Tahoe 26.3 \| \|system \|aarch64, darwin20 \| \|ui \|RStudio \| \|language \|(EN) \| \|collate \|en_US.UTF-8 \| \|ctype \|en_US.UTF-8 \| \|tz \|Europe/Copenhagen \| \|date \|2026-03-02 \| \|rstudio \|2026.01.1+403 Apple Blossom (desktop) \| \|pandoc \|3.6.4 @ /opt/homebrew/bin/ (via rmarkdown) \| \|quarto \|1.7.30 @ /usr/local/bin/quarto \| \|FreesearchR \|26.3.1.260302 \| | ## ———————————– packages ———————————– @@ -29,6 +29,7 @@ | cardx | 0.3.2 | 2026-02-05 | CRAN (R 4.5.2) | | caTools | 1.18.3 | 2024-09-04 | CRAN (R 4.5.0) | | cellranger | 1.1.0 | 2016-07-27 | CRAN (R 4.5.0) | +| cffr | 1.2.1 | 2026-01-12 | CRAN (R 4.5.2) | | checkmate | 2.3.4 | 2026-02-03 | CRAN (R 4.5.2) | | class | 7.3-23 | 2025-01-01 | CRAN (R 4.5.2) | | classInt | 0.4-11 | 2025-01-08 | CRAN (R 4.5.0) | @@ -38,7 +39,6 @@ | colorspace | 2.1-2 | 2025-09-22 | CRAN (R 4.5.0) | | commonmark | 2.0.0 | 2025-07-07 | CRAN (R 4.5.0) | | crayon | 1.5.3 | 2024-06-20 | CRAN (R 4.5.0) | -| crul | 1.6.0 | NA | NA | | curl | 7.0.0 | 2025-08-19 | CRAN (R 4.5.0) | | data.table | 1.18.2.1 | 2026-01-27 | CRAN (R 4.5.2) | | datamods | 1.5.3 | 2024-10-02 | CRAN (R 4.5.0) | @@ -74,7 +74,6 @@ | fs | 1.6.6 | 2025-04-12 | CRAN (R 4.5.0) | | gdtools | 0.5.0 | 2026-02-09 | CRAN (R 4.5.2) | | generics | 0.1.4 | 2025-05-09 | CRAN (R 4.5.0) | -| gfonts | 0.2.0 | NA | NA | | ggalluvial | 0.12.5 | 2023-02-22 | CRAN (R 4.5.0) | | ggcorrplot | 0.1.4.1 | 2023-09-05 | CRAN (R 4.5.0) | | ggforce | 0.5.0 | 2025-06-18 | CRAN (R 4.5.0) | @@ -93,17 +92,16 @@ | htmlTable | 2.4.3 | 2024-07-21 | CRAN (R 4.5.0) | | htmltools | 0.5.9 | 2025-12-04 | CRAN (R 4.5.2) | | htmlwidgets | 1.6.4 | 2023-12-06 | CRAN (R 4.5.0) | -| httpcode | 0.3.0 | NA | NA | | httpuv | 1.6.16 | 2025-04-16 | CRAN (R 4.5.0) | | IDEAFilter | 0.2.1 | 2025-07-29 | CRAN (R 4.5.0) | | insight | 1.4.6 | 2026-02-04 | CRAN (R 4.5.2) | | iterators | 1.0.14 | 2022-02-05 | CRAN (R 4.5.0) | | jquerylib | 0.1.4 | 2021-04-26 | CRAN (R 4.5.0) | | jsonlite | 2.0.0 | 2025-03-27 | CRAN (R 4.5.0) | +| jsonvalidate | 1.5.0 | 2025-02-07 | CRAN (R 4.5.0) | | KernSmooth | 2.23-26 | 2025-01-01 | CRAN (R 4.5.2) | | keyring | 1.4.1 | 2025-06-15 | CRAN (R 4.5.0) | | knitr | 1.51 | 2025-12-20 | CRAN (R 4.5.2) | -| labeling | 0.4.3 | 2023-08-29 | CRAN (R 4.5.0) | | later | 1.4.6 | 2026-02-13 | CRAN (R 4.5.2) | | lattice | 0.22-7 | 2025-04-02 | CRAN (R 4.5.2) | | lifecycle | 1.0.5 | 2026-01-08 | CRAN (R 4.5.2) | @@ -125,7 +123,6 @@ | openssl | 2.3.4 | 2025-09-30 | CRAN (R 4.5.0) | | openxlsx2 | 1.23.1 | 2026-01-19 | CRAN (R 4.5.2) | | otel | 0.2.0 | 2025-08-29 | CRAN (R 4.5.0) | -| pak | 0.9.2 | 2025-12-22 | CRAN (R 4.5.2) | | parameters | 0.28.3 | 2025-11-25 | CRAN (R 4.5.2) | | patchwork | 1.3.2 | 2025-08-25 | CRAN (R 4.5.0) | | pbmcapply | 1.5.1 | 2022-04-28 | CRAN (R 4.5.0) | @@ -149,6 +146,7 @@ | R6 | 2.6.1 | 2025-02-15 | CRAN (R 4.5.0) | | ragg | 1.5.0 | 2025-09-02 | CRAN (R 4.5.0) | | rankinPlot | 1.1.0 | 2023-01-30 | CRAN (R 4.5.0) | +| rappdirs | 0.3.4 | 2026-01-17 | CRAN (R 4.5.2) | | rbibutils | 2.4.1 | 2026-01-21 | CRAN (R 4.5.2) | | RColorBrewer | 1.1-3 | 2022-04-03 | CRAN (R 4.5.0) | | Rcpp | 1.1.1 | 2026-01-10 | CRAN (R 4.5.2) | @@ -198,13 +196,12 @@ | tidyselect | 1.2.1 | 2024-03-11 | CRAN (R 4.5.0) | | timechange | 0.4.0 | 2026-01-29 | CRAN (R 4.5.2) | | toastui | 0.4.0 | 2025-04-03 | CRAN (R 4.5.0) | -| triebeard | 0.4.1 | NA | NA | | tweenr | 2.0.3 | 2024-02-26 | CRAN (R 4.5.0) | | twosamples | 2.0.1 | 2023-06-23 | CRAN (R 4.5.0) | | tzdb | 0.5.0 | 2025-03-15 | CRAN (R 4.5.0) | -| urltools | 1.7.3.1 | NA | NA | | usethis | 3.2.1 | 2025-09-06 | CRAN (R 4.5.0) | | uuid | 1.2-2 | 2026-01-23 | CRAN (R 4.5.2) | +| V8 | 8.0.1 | 2025-10-10 | CRAN (R 4.5.0) | | vctrs | 0.7.1 | 2026-01-23 | CRAN (R 4.5.2) | | viridis | 0.6.5 | 2024-01-29 | CRAN (R 4.5.0) | | viridisLite | 0.4.3 | 2026-02-04 | CRAN (R 4.5.2) | diff --git a/articles/FreesearchR.html b/articles/FreesearchR.html index 490e225b..fbcb5659 100644 --- a/articles/FreesearchR.html +++ b/articles/FreesearchR.html @@ -73,7 +73,7 @@

FreesearchR

- Source: vignettes/FreesearchR.Rmd + Source: vignettes/FreesearchR.Rmd
FreesearchR.Rmd
diff --git a/articles/data-types.html b/articles/data-types.html index 36557632..725a57de 100644 --- a/articles/data-types.html +++ b/articles/data-types.html @@ -73,7 +73,7 @@

Data types

- Source: vignettes/data-types.Rmd + Source: vignettes/data-types.Rmd
data-types.Rmd
diff --git a/articles/missingness.html b/articles/missingness.html index 8ad570cd..09f1b0d3 100644 --- a/articles/missingness.html +++ b/articles/missingness.html @@ -73,7 +73,7 @@

Missingness in data

- Source: vignettes/missingness.Rmd + Source: vignettes/missingness.Rmd
missingness.Rmd
diff --git a/articles/session.html b/articles/session.html index f5be7577..258332d6 100644 --- a/articles/session.html +++ b/articles/session.html @@ -73,7 +73,7 @@

Session info

- Source: vignettes/session.Rmd + Source: vignettes/session.Rmd
session.Rmd
@@ -133,7 +133,7 @@ packages and the latest build info.

- + @@ -149,7 +149,7 @@ packages and the latest build info.

- +
package1.1.0 2016-07-27 CRAN (R 4.5.0)
checkmate
cffr1.2.12026-01-12CRAN (R 4.5.2)
checkmate 2.3.4 2026-02-03 CRAN (R 4.5.2)
class
class 7.3-23 2025-01-01 CRAN (R 4.5.2)
classInt
classInt 0.4-11 2025-01-08 CRAN (R 4.5.0)
cli
cli 3.6.5 2025-04-23 CRAN (R 4.5.0)
cluster
cluster 2.1.8.2 2026-02-05 CRAN (R 4.5.2)
codetools
codetools 0.2-20 2024-03-31 CRAN (R 4.5.2)
colorspace
colorspace 2.1-2 2025-09-22 CRAN (R 4.5.0)
commonmark
commonmark 2.0.0 2025-07-07 CRAN (R 4.5.0)
crayon
crayon 1.5.3 2024-06-20 CRAN (R 4.5.0)
crul1.6.0NANA
curl 7.0.0 2025-08-190.1.4 2025-05-09 CRAN (R 4.5.0)
gfonts0.2.0NANA
ggalluvial
ggalluvial 0.12.5 2023-02-22 CRAN (R 4.5.0)
ggcorrplot
ggcorrplot 0.1.4.1 2023-09-05 CRAN (R 4.5.0)
ggforce
ggforce 0.5.0 2025-06-18 CRAN (R 4.5.0)
ggplot2
ggplot2 4.0.2 2026-02-03 CRAN (R 4.5.2)
ggridges
ggridges 0.5.7 2025-08-27 CRAN (R 4.5.0)
ggstats
ggstats 0.12.0 2025-12-22 CRAN (R 4.5.2)
glue
glue 1.8.0 2024-09-30 CRAN (R 4.5.0)
gridExtra
gridExtra 2.3 2017-09-09 CRAN (R 4.5.0)
gt
gt 1.3.0 2026-01-22 CRAN (R 4.5.2)
gtable
gtable 0.3.6 2024-10-25 CRAN (R 4.5.0)
gtsummary
gtsummary 2.5.0 2025-12-05 CRAN (R 4.5.2)
haven
haven 2.5.5 2025-05-30 CRAN (R 4.5.0)
here
here 1.0.2 2025-09-15 CRAN (R 4.5.0)
Hmisc
Hmisc 5.2-5 2026-01-09 CRAN (R 4.5.2)
hms
hms 1.1.4 2025-10-17 CRAN (R 4.5.0)
htmlTable
htmlTable 2.4.3 2024-07-21 CRAN (R 4.5.0)
htmltools
htmltools 0.5.9 2025-12-04 CRAN (R 4.5.2)
htmlwidgets
htmlwidgets 1.6.4 2023-12-06 CRAN (R 4.5.0)
httpcode0.3.0NANA
httpuv 1.6.16 2025-04-162.0.0 2025-03-27 CRAN (R 4.5.0)
KernSmooth
jsonvalidate1.5.02025-02-07CRAN (R 4.5.0)
KernSmooth 2.23-26 2025-01-01 CRAN (R 4.5.2)
keyring
keyring 1.4.1 2025-06-15 CRAN (R 4.5.0)
knitr
knitr 1.51 2025-12-20 CRAN (R 4.5.2)
labeling0.4.32023-08-29CRAN (R 4.5.0)
later 1.4.6 2026-02-130.2.0 2025-08-29 CRAN (R 4.5.0)
pak0.9.22025-12-22CRAN (R 4.5.2)
parameters
parameters 0.28.3 2025-11-25 CRAN (R 4.5.2)
patchwork
patchwork 1.3.2 2025-08-25 CRAN (R 4.5.0)
pbmcapply
pbmcapply 1.5.1 2022-04-28 CRAN (R 4.5.0)
performance
performance 0.16.0 2026-02-04 CRAN (R 4.5.2)
phosphoricons
phosphoricons 0.2.1 2024-04-08 CRAN (R 4.5.0)
pillar
pillar 1.11.1 2025-09-17 CRAN (R 4.5.0)
pkgbuild
pkgbuild 1.4.8 2025-05-26 CRAN (R 4.5.0)
pkgconfig
pkgconfig 2.0.3 2019-09-22 CRAN (R 4.5.0)
pkgload
pkgload 1.5.0 2026-02-03 CRAN (R 4.5.2)
plyr
plyr 1.8.9 2023-10-02 CRAN (R 4.5.0)
polyclip
polyclip 1.10-7 2024-07-23 CRAN (R 4.5.0)
pracma
pracma 2.4.6 2025-10-22 CRAN (R 4.5.0)
processx
processx 3.8.6 2025-02-21 CRAN (R 4.5.0)
promises
promises 1.5.0 2025-11-01 CRAN (R 4.5.0)
proxy
proxy 0.4-29 2025-12-29 CRAN (R 4.5.2)
ps
ps 1.9.1 2025-04-12 CRAN (R 4.5.0)
purrr
purrr 1.2.1 2026-01-09 CRAN (R 4.5.2)
qqconf
qqconf 1.3.2 2023-04-14 CRAN (R 4.5.0)
qqplotr
qqplotr 0.0.7 2025-09-05 CRAN (R 4.5.0)
quarto
quarto 1.5.1 2025-09-04 CRAN (R 4.5.0)
R6
R6 2.6.1 2025-02-15 CRAN (R 4.5.0)
ragg
ragg 1.5.0 2025-09-02 CRAN (R 4.5.0)
rankinPlot
rankinPlot 1.1.0 2023-01-30 CRAN (R 4.5.0)
rappdirs0.3.42026-01-17CRAN (R 4.5.2)
rbibutils 2.4.1 2026-01-210.4.0 2025-04-03 CRAN (R 4.5.0)
triebeard0.4.1NANA
tweenr
tweenr 2.0.3 2024-02-26 CRAN (R 4.5.0)
twosamples
twosamples 2.0.1 2023-06-23 CRAN (R 4.5.0)
tzdb
tzdb 0.5.0 2025-03-15 CRAN (R 4.5.0)
urltools1.7.3.1NANA
usethis 3.2.1 2025-09-061.2-2 2026-01-23 CRAN (R 4.5.2)
vctrs
V88.0.12025-10-10CRAN (R 4.5.0)
vctrs 0.7.1 2026-01-23 CRAN (R 4.5.2)
viridis
viridis 0.6.5 2024-01-29 CRAN (R 4.5.0)
viridisLite
viridisLite 0.4.3 2026-02-04 CRAN (R 4.5.2)
vroom
vroom 1.7.0 2026-01-27 CRAN (R 4.5.2)
withr
withr 3.0.2 2024-10-28 CRAN (R 4.5.0)
writexl
writexl 1.5.4 2025-04-15 CRAN (R 4.5.0)
xfun
xfun 0.56 2026-01-18 CRAN (R 4.5.2)
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xml2 1.5.2 2026-01-17 CRAN (R 4.5.2)
xtable
xtable 1.8-4 2019-04-21 CRAN (R 4.5.0)
yaml
yaml 2.3.12 2025-12-10 CRAN (R 4.5.2)
zip
zip 2.3.3 2025-05-13 CRAN (R 4.5.0)
date2026-02-282026-03-02
rstudio
FreesearchR26.3.1.26022826.3.1.260302
@@ -294,65 +294,65 @@ packages and the latest build info.

CRAN (R 4.5.0) +cffr +1.2.1 +2026-01-12 +CRAN (R 4.5.2) + + checkmate 2.3.4 2026-02-03 CRAN (R 4.5.2) - + class 7.3-23 2025-01-01 CRAN (R 4.5.2) - + classInt 0.4-11 2025-01-08 CRAN (R 4.5.0) - + cli 3.6.5 2025-04-23 CRAN (R 4.5.0) - + cluster 2.1.8.2 2026-02-05 CRAN (R 4.5.2) - + codetools 0.2-20 2024-03-31 CRAN (R 4.5.2) - + colorspace 2.1-2 2025-09-22 CRAN (R 4.5.0) - + commonmark 2.0.0 2025-07-07 CRAN (R 4.5.0) - + crayon 1.5.3 2024-06-20 CRAN (R 4.5.0) - -crul -1.6.0 -NA -NA - curl 7.0.0 @@ -564,125 +564,113 @@ packages and the latest build info.

CRAN (R 4.5.0) -gfonts -0.2.0 -NA -NA - - ggalluvial 0.12.5 2023-02-22 CRAN (R 4.5.0) - + ggcorrplot 0.1.4.1 2023-09-05 CRAN (R 4.5.0) - + ggforce 0.5.0 2025-06-18 CRAN (R 4.5.0) - + ggplot2 4.0.2 2026-02-03 CRAN (R 4.5.2) - + ggridges 0.5.7 2025-08-27 CRAN (R 4.5.0) - + ggstats 0.12.0 2025-12-22 CRAN (R 4.5.2) - + glue 1.8.0 2024-09-30 CRAN (R 4.5.0) - + gridExtra 2.3 2017-09-09 CRAN (R 4.5.0) - + gt 1.3.0 2026-01-22 CRAN (R 4.5.2) - + gtable 0.3.6 2024-10-25 CRAN (R 4.5.0) - + gtsummary 2.5.0 2025-12-05 CRAN (R 4.5.2) - + haven 2.5.5 2025-05-30 CRAN (R 4.5.0) - + here 1.0.2 2025-09-15 CRAN (R 4.5.0) - + Hmisc 5.2-5 2026-01-09 CRAN (R 4.5.2) - + hms 1.1.4 2025-10-17 CRAN (R 4.5.0) - + htmlTable 2.4.3 2024-07-21 CRAN (R 4.5.0) - + htmltools 0.5.9 2025-12-04 CRAN (R 4.5.2) - + htmlwidgets 1.6.4 2023-12-06 CRAN (R 4.5.0) - -httpcode -0.3.0 -NA -NA - httpuv 1.6.16 @@ -720,29 +708,29 @@ packages and the latest build info.

CRAN (R 4.5.0) +jsonvalidate +1.5.0 +2025-02-07 +CRAN (R 4.5.0) + + KernSmooth 2.23-26 2025-01-01 CRAN (R 4.5.2) - + keyring 1.4.1 2025-06-15 CRAN (R 4.5.0) - + knitr 1.51 2025-12-20 CRAN (R 4.5.2) - -labeling -0.4.3 -2023-08-29 -CRAN (R 4.5.0) - later 1.4.6 @@ -870,149 +858,149 @@ packages and the latest build info.

CRAN (R 4.5.0) -pak -0.9.2 -2025-12-22 -CRAN (R 4.5.2) - - parameters 0.28.3 2025-11-25 CRAN (R 4.5.2) - + patchwork 1.3.2 2025-08-25 CRAN (R 4.5.0) - + pbmcapply 1.5.1 2022-04-28 CRAN (R 4.5.0) - + performance 0.16.0 2026-02-04 CRAN (R 4.5.2) - + phosphoricons 0.2.1 2024-04-08 CRAN (R 4.5.0) - + pillar 1.11.1 2025-09-17 CRAN (R 4.5.0) - + pkgbuild 1.4.8 2025-05-26 CRAN (R 4.5.0) - + pkgconfig 2.0.3 2019-09-22 CRAN (R 4.5.0) - + pkgload 1.5.0 2026-02-03 CRAN (R 4.5.2) - + plyr 1.8.9 2023-10-02 CRAN (R 4.5.0) - + polyclip 1.10-7 2024-07-23 CRAN (R 4.5.0) - + pracma 2.4.6 2025-10-22 CRAN (R 4.5.0) - + processx 3.8.6 2025-02-21 CRAN (R 4.5.0) - + promises 1.5.0 2025-11-01 CRAN (R 4.5.0) - + proxy 0.4-29 2025-12-29 CRAN (R 4.5.2) - + ps 1.9.1 2025-04-12 CRAN (R 4.5.0) - + purrr 1.2.1 2026-01-09 CRAN (R 4.5.2) - + qqconf 1.3.2 2023-04-14 CRAN (R 4.5.0) - + qqplotr 0.0.7 2025-09-05 CRAN (R 4.5.0) - + quarto 1.5.1 2025-09-04 CRAN (R 4.5.0) - + R6 2.6.1 2025-02-15 CRAN (R 4.5.0) - + ragg 1.5.0 2025-09-02 CRAN (R 4.5.0) - + rankinPlot 1.1.0 2023-01-30 CRAN (R 4.5.0) + +rappdirs +0.3.4 +2026-01-17 +CRAN (R 4.5.2) + rbibutils 2.4.1 @@ -1308,35 +1296,23 @@ packages and the latest build info.

CRAN (R 4.5.0) -triebeard -0.4.1 -NA -NA - - tweenr 2.0.3 2024-02-26 CRAN (R 4.5.0) - + twosamples 2.0.1 2023-06-23 CRAN (R 4.5.0) - + tzdb 0.5.0 2025-03-15 CRAN (R 4.5.0) - -urltools -1.7.3.1 -NA -NA - usethis 3.2.1 @@ -1350,66 +1326,72 @@ packages and the latest build info.

CRAN (R 4.5.2) +V8 +8.0.1 +2025-10-10 +CRAN (R 4.5.0) + + vctrs 0.7.1 2026-01-23 CRAN (R 4.5.2) - + viridis 0.6.5 2024-01-29 CRAN (R 4.5.0) - + viridisLite 0.4.3 2026-02-04 CRAN (R 4.5.2) - + vroom 1.7.0 2026-01-27 CRAN (R 4.5.2) - + withr 3.0.2 2024-10-28 CRAN (R 4.5.0) - + writexl 1.5.4 2025-04-15 CRAN (R 4.5.0) - + xfun 0.56 2026-01-18 CRAN (R 4.5.2) - + xml2 1.5.2 2026-01-17 CRAN (R 4.5.2) - + xtable 1.8-4 2019-04-21 CRAN (R 4.5.0) - + yaml 2.3.12 2025-12-10 CRAN (R 4.5.2) - + zip 2.3.3 2025-05-13 diff --git a/articles/session.md b/articles/session.md index 0c3168ef..a35256e2 100644 --- a/articles/session.md +++ b/articles/session.md @@ -28,11 +28,11 @@ FreesearchR:::session_data$platform |> knitr::kable() | collate | en_US.UTF-8 | | ctype | en_US.UTF-8 | | tz | Europe/Copenhagen | -| date | 2026-02-28 | +| date | 2026-03-02 | | rstudio | 2026.01.1+403 Apple Blossom (desktop) | | pandoc | 3.6.4 @ /opt/homebrew/bin/ (via rmarkdown) | | quarto | 1.7.30 @ /usr/local/bin/quarto | -| FreesearchR | 26.3.1.260228 | +| FreesearchR | 26.3.1.260302 | ## Libraries @@ -63,6 +63,7 @@ FreesearchR:::session_data$libs|> knitr::kable() | cardx | 0.3.2 | 2026-02-05 | CRAN (R 4.5.2) | | caTools | 1.18.3 | 2024-09-04 | CRAN (R 4.5.0) | | cellranger | 1.1.0 | 2016-07-27 | CRAN (R 4.5.0) | +| cffr | 1.2.1 | 2026-01-12 | CRAN (R 4.5.2) | | checkmate | 2.3.4 | 2026-02-03 | CRAN (R 4.5.2) | | class | 7.3-23 | 2025-01-01 | CRAN (R 4.5.2) | | classInt | 0.4-11 | 2025-01-08 | CRAN (R 4.5.0) | @@ -72,7 +73,6 @@ FreesearchR:::session_data$libs|> knitr::kable() | colorspace | 2.1-2 | 2025-09-22 | CRAN (R 4.5.0) | | commonmark | 2.0.0 | 2025-07-07 | CRAN (R 4.5.0) | | crayon | 1.5.3 | 2024-06-20 | CRAN (R 4.5.0) | -| crul | 1.6.0 | NA | NA | | curl | 7.0.0 | 2025-08-19 | CRAN (R 4.5.0) | | data.table | 1.18.2.1 | 2026-01-27 | CRAN (R 4.5.2) | | datamods | 1.5.3 | 2024-10-02 | CRAN (R 4.5.0) | @@ -108,7 +108,6 @@ FreesearchR:::session_data$libs|> knitr::kable() | fs | 1.6.6 | 2025-04-12 | CRAN (R 4.5.0) | | gdtools | 0.5.0 | 2026-02-09 | CRAN (R 4.5.2) | | generics | 0.1.4 | 2025-05-09 | CRAN (R 4.5.0) | -| gfonts | 0.2.0 | NA | NA | | ggalluvial | 0.12.5 | 2023-02-22 | CRAN (R 4.5.0) | | ggcorrplot | 0.1.4.1 | 2023-09-05 | CRAN (R 4.5.0) | | ggforce | 0.5.0 | 2025-06-18 | CRAN (R 4.5.0) | @@ -127,17 +126,16 @@ FreesearchR:::session_data$libs|> knitr::kable() | htmlTable | 2.4.3 | 2024-07-21 | CRAN (R 4.5.0) | | htmltools | 0.5.9 | 2025-12-04 | CRAN (R 4.5.2) | | htmlwidgets | 1.6.4 | 2023-12-06 | CRAN (R 4.5.0) | -| httpcode | 0.3.0 | NA | NA | | httpuv | 1.6.16 | 2025-04-16 | CRAN (R 4.5.0) | | IDEAFilter | 0.2.1 | 2025-07-29 | CRAN (R 4.5.0) | | insight | 1.4.6 | 2026-02-04 | CRAN (R 4.5.2) | | iterators | 1.0.14 | 2022-02-05 | CRAN (R 4.5.0) | | jquerylib | 0.1.4 | 2021-04-26 | CRAN (R 4.5.0) | | jsonlite | 2.0.0 | 2025-03-27 | CRAN (R 4.5.0) | +| jsonvalidate | 1.5.0 | 2025-02-07 | CRAN (R 4.5.0) | | KernSmooth | 2.23-26 | 2025-01-01 | CRAN (R 4.5.2) | | keyring | 1.4.1 | 2025-06-15 | CRAN (R 4.5.0) | | knitr | 1.51 | 2025-12-20 | CRAN (R 4.5.2) | -| labeling | 0.4.3 | 2023-08-29 | CRAN (R 4.5.0) | | later | 1.4.6 | 2026-02-13 | CRAN (R 4.5.2) | | lattice | 0.22-7 | 2025-04-02 | CRAN (R 4.5.2) | | lifecycle | 1.0.5 | 2026-01-08 | CRAN (R 4.5.2) | @@ -159,7 +157,6 @@ FreesearchR:::session_data$libs|> knitr::kable() | openssl | 2.3.4 | 2025-09-30 | CRAN (R 4.5.0) | | openxlsx2 | 1.23.1 | 2026-01-19 | CRAN (R 4.5.2) | | otel | 0.2.0 | 2025-08-29 | CRAN (R 4.5.0) | -| pak | 0.9.2 | 2025-12-22 | CRAN (R 4.5.2) | | parameters | 0.28.3 | 2025-11-25 | CRAN (R 4.5.2) | | patchwork | 1.3.2 | 2025-08-25 | CRAN (R 4.5.0) | | pbmcapply | 1.5.1 | 2022-04-28 | CRAN (R 4.5.0) | @@ -183,6 +180,7 @@ FreesearchR:::session_data$libs|> knitr::kable() | R6 | 2.6.1 | 2025-02-15 | CRAN (R 4.5.0) | | ragg | 1.5.0 | 2025-09-02 | CRAN (R 4.5.0) | | rankinPlot | 1.1.0 | 2023-01-30 | CRAN (R 4.5.0) | +| rappdirs | 0.3.4 | 2026-01-17 | CRAN (R 4.5.2) | | rbibutils | 2.4.1 | 2026-01-21 | CRAN (R 4.5.2) | | RColorBrewer | 1.1-3 | 2022-04-03 | CRAN (R 4.5.0) | | Rcpp | 1.1.1 | 2026-01-10 | CRAN (R 4.5.2) | @@ -232,13 +230,12 @@ FreesearchR:::session_data$libs|> knitr::kable() | tidyselect | 1.2.1 | 2024-03-11 | CRAN (R 4.5.0) | | timechange | 0.4.0 | 2026-01-29 | CRAN (R 4.5.2) | | toastui | 0.4.0 | 2025-04-03 | CRAN (R 4.5.0) | -| triebeard | 0.4.1 | NA | NA | | tweenr | 2.0.3 | 2024-02-26 | CRAN (R 4.5.0) | | twosamples | 2.0.1 | 2023-06-23 | CRAN (R 4.5.0) | | tzdb | 0.5.0 | 2025-03-15 | CRAN (R 4.5.0) | -| urltools | 1.7.3.1 | NA | NA | | usethis | 3.2.1 | 2025-09-06 | CRAN (R 4.5.0) | | uuid | 1.2-2 | 2026-01-23 | CRAN (R 4.5.2) | +| V8 | 8.0.1 | 2025-10-10 | CRAN (R 4.5.0) | | vctrs | 0.7.1 | 2026-01-23 | CRAN (R 4.5.2) | | viridis | 0.6.5 | 2024-01-29 | CRAN (R 4.5.0) | | viridisLite | 0.4.3 | 2026-02-04 | CRAN (R 4.5.2) | diff --git a/articles/visuals.html b/articles/visuals.html index 9631fe40..2d7d07c3 100644 --- a/articles/visuals.html +++ b/articles/visuals.html @@ -73,7 +73,7 @@

On visuals

- Source: vignettes/visuals.Rmd + Source: vignettes/visuals.Rmd
visuals.Rmd
diff --git a/authors.html b/authors.html index 5bef0b55..970eed6d 100644 --- a/authors.html +++ b/authors.html @@ -59,7 +59,7 @@

Citation

-

Source: DESCRIPTION

+

Source: DESCRIPTION

Damsbo A (2026). FreesearchR: Easy data analysis for clinicians. diff --git a/authors.md b/authors.md index 55c51915..591fff5f 100644 --- a/authors.md +++ b/authors.md @@ -12,7 +12,7 @@ ## Citation Source: -[`DESCRIPTION`](https://github.com/agdamsbo/FreesearchR/blob/main/DESCRIPTION) +[`DESCRIPTION`](https://github.com/agdamsbo/FreesearchR/blob/v26.3.1/DESCRIPTION) Damsbo A (2026). *FreesearchR: Easy data analysis for clinicians*. R package version 26.3.1, . diff --git a/llms.txt b/llms.txt index 2797d73a..fa0b6e32 100644 --- a/llms.txt +++ b/llms.txt @@ -126,6 +126,8 @@ No tracking data is sent running the app locally (see above). - [`FreesearchR_palette()`](https://agdamsbo.github.io/FreesearchR/reference/FreesearchR_palette.md) : Use the FreesearchR colors +- [`FreesearchR_theme()`](https://agdamsbo.github.io/FreesearchR/reference/FreesearchR_theme.md) + : Custom theme based on unity - [`add_class_icon()`](https://agdamsbo.github.io/FreesearchR/reference/add_class_icon.md) : Convert class grid column to icon - [`add_sparkline()`](https://agdamsbo.github.io/FreesearchR/reference/add_sparkline.md) @@ -175,8 +177,6 @@ No tracking data is sent running the app locally (see above). : Create summetric log ticks - [`create_overview_datagrid()`](https://agdamsbo.github.io/FreesearchR/reference/create_overview_datagrid.md) : Create a data overview datagrid -- [`custom_theme()`](https://agdamsbo.github.io/FreesearchR/reference/custom_theme.md) - : Custom theme based on unity - [`cut_variable_ui()`](https://agdamsbo.github.io/FreesearchR/reference/cut-variable.md) [`cut_variable_server()`](https://agdamsbo.github.io/FreesearchR/reference/cut-variable.md) [`modal_cut_variable()`](https://agdamsbo.github.io/FreesearchR/reference/cut-variable.md) diff --git a/news/index.html b/news/index.html index 97ac28bb..8b238370 100644 --- a/news/index.html +++ b/news/index.html @@ -38,12 +38,12 @@

FreesearchR 26.3.1

-

FIX Include font files for static loading without dependency on Google.

+

FIX Include font files for static loading without dependency on Google. Kept webfonts from google as local fonts are not working for now.

NEW Updated text strings to better reflect environment data availability.

New strings translated.

diff --git a/news/index.md b/news/index.md index aa4f83df..4abf44fa 100644 --- a/news/index.md +++ b/news/index.md @@ -2,8 +2,9 @@ ## FreesearchR 26.3.1 -*FIX* Include font files for static loading without dependency on -Google. +*FIX* ~~Include font files for static loading without dependency on +Google.~~ Kept webfonts from google as local fonts are not working for +now. *NEW* Updated text strings to better reflect environment data availability. diff --git a/pkgdown.yml b/pkgdown.yml index 429f5112..2d8ea0fc 100644 --- a/pkgdown.yml +++ b/pkgdown.yml @@ -7,7 +7,7 @@ articles: missingness: missingness.html session: session.html visuals: visuals.html -last_built: 2026-02-28T11:24Z +last_built: 2026-03-02T19:58Z urls: reference: https://agdamsbo.github.io/FreesearchR/reference article: https://agdamsbo.github.io/FreesearchR/articles diff --git a/reference/FreesearchR_palette.html b/reference/FreesearchR_palette.html index 9d6c1740..30a6f0ef 100644 --- a/reference/FreesearchR_palette.html +++ b/reference/FreesearchR_palette.html @@ -38,7 +38,7 @@
diff --git a/reference/FreesearchR_theme.html b/reference/FreesearchR_theme.html new file mode 100644 index 00000000..bf6e0564 --- /dev/null +++ b/reference/FreesearchR_theme.html @@ -0,0 +1,107 @@ + +Custom theme based on unity — FreesearchR_theme • FreesearchR + Skip to contents + + +
+
+
+ +
+

Custom theme based on unity

+
+ +
+

Usage

+
FreesearchR_theme(
+  ...,
+  version = 5,
+  primary = FreesearchR_colors("primary"),
+  secondary = FreesearchR_colors("secondary"),
+  bootswatch = "united",
+  base_font = bslib::font_google("Montserrat"),
+  heading_font = bslib::font_google("Public Sans", wght = "700"),
+  code_font = bslib::font_google("Open Sans"),
+  success = FreesearchR_colors("success"),
+  info = FreesearchR_colors("info"),
+  warning = FreesearchR_colors("warning"),
+  danger = FreesearchR_colors("danger")
+)
+
+ +
+

Arguments

+ + +
...
+

everything passed on to bslib::bs_theme()

+ +
+
+

Value

+

theme list

+
+ +
+

Examples

+
if (interactive()) {
+bs_theme_preview(FreesearchR_theme)
+}
+
+
+
+
+ + +
+ + + +
+ + + + + + + diff --git a/reference/FreesearchR_theme.md b/reference/FreesearchR_theme.md new file mode 100644 index 00000000..71d7a56f --- /dev/null +++ b/reference/FreesearchR_theme.md @@ -0,0 +1,40 @@ +# Custom theme based on unity + +Custom theme based on unity + +## Usage + +``` r +FreesearchR_theme( + ..., + version = 5, + primary = FreesearchR_colors("primary"), + secondary = FreesearchR_colors("secondary"), + bootswatch = "united", + base_font = bslib::font_google("Montserrat"), + heading_font = bslib::font_google("Public Sans", wght = "700"), + code_font = bslib::font_google("Open Sans"), + success = FreesearchR_colors("success"), + info = FreesearchR_colors("info"), + warning = FreesearchR_colors("warning"), + danger = FreesearchR_colors("danger") +) +``` + +## Arguments + +- ...: + + everything passed on to bslib::bs_theme() + +## Value + +theme list + +## Examples + +``` r +if (interactive()) { +bs_theme_preview(FreesearchR_theme) +} +``` diff --git a/reference/add_class_icon.html b/reference/add_class_icon.html index 0921d683..53fe787b 100644 --- a/reference/add_class_icon.html +++ b/reference/add_class_icon.html @@ -38,7 +38,7 @@
diff --git a/reference/add_sparkline.html b/reference/add_sparkline.html index 004a3a16..8cfa3a09 100644 --- a/reference/add_sparkline.html +++ b/reference/add_sparkline.html @@ -38,7 +38,7 @@
diff --git a/reference/align_axes.html b/reference/align_axes.html index 22a92516..c74f85ff 100644 --- a/reference/align_axes.html +++ b/reference/align_axes.html @@ -38,7 +38,7 @@
diff --git a/reference/all_but.html b/reference/all_but.html index 3ca74d1d..6ddb97c8 100644 --- a/reference/all_but.html +++ b/reference/all_but.html @@ -38,7 +38,7 @@
diff --git a/reference/append_column.html b/reference/append_column.html index bb26e27a..4de13506 100644 --- a/reference/append_column.html +++ b/reference/append_column.html @@ -38,7 +38,7 @@
diff --git a/reference/append_list.html b/reference/append_list.html index 4e303a80..4cde3eeb 100644 --- a/reference/append_list.html +++ b/reference/append_list.html @@ -38,7 +38,7 @@
diff --git a/reference/argsstring2list.html b/reference/argsstring2list.html index bbc91bc8..6a830f67 100644 --- a/reference/argsstring2list.html +++ b/reference/argsstring2list.html @@ -38,7 +38,7 @@
diff --git a/reference/baseline_table.html b/reference/baseline_table.html index 2e2b3d9e..70a90ef1 100644 --- a/reference/baseline_table.html +++ b/reference/baseline_table.html @@ -38,7 +38,7 @@
@@ -84,7 +84,7 @@

Examples

mtcars |> baseline_table()
-
+
@@ -113,7 +113,7 @@
Characteristic N = 3211 (3.1%)
    8 1 (3.1%)
1 Median (Q1, Q3); n (%)
mtcars |> baseline_table(fun.args = list(by = "gear")) -
+
Characteristic 3
diff --git a/reference/class_icons.html b/reference/class_icons.html index 3528cf63..e6618a16 100644 --- a/reference/class_icons.html +++ b/reference/class_icons.html @@ -38,7 +38,7 @@
diff --git a/reference/clean_common_axis.html b/reference/clean_common_axis.html index f1e50c61..64b66077 100644 --- a/reference/clean_common_axis.html +++ b/reference/clean_common_axis.html @@ -38,7 +38,7 @@
diff --git a/reference/clean_date.html b/reference/clean_date.html index 9e1cb4f2..dc3a3b01 100644 --- a/reference/clean_date.html +++ b/reference/clean_date.html @@ -38,7 +38,7 @@
diff --git a/reference/clean_sep.html b/reference/clean_sep.html index cf41894f..ccffcc4b 100644 --- a/reference/clean_sep.html +++ b/reference/clean_sep.html @@ -38,7 +38,7 @@
diff --git a/reference/collapse_spaces.html b/reference/collapse_spaces.html index 230d2eb0..e1052d8a 100644 --- a/reference/collapse_spaces.html +++ b/reference/collapse_spaces.html @@ -40,7 +40,7 @@ but it works">
diff --git a/reference/columnSelectInput.html b/reference/columnSelectInput.html index 13d69bf7..20adf9a5 100644 --- a/reference/columnSelectInput.html +++ b/reference/columnSelectInput.html @@ -40,7 +40,7 @@ Adds the option to select "none" which is handled later'>
diff --git a/reference/compare_missings.html b/reference/compare_missings.html index 2e4d8de8..fb2f29a8 100644 --- a/reference/compare_missings.html +++ b/reference/compare_missings.html @@ -38,7 +38,7 @@
diff --git a/reference/contrast_text.html b/reference/contrast_text.html index ee928f68..76ab9d23 100644 --- a/reference/contrast_text.html +++ b/reference/contrast_text.html @@ -40,7 +40,7 @@ background color.">
diff --git a/reference/corr_pairs_validate.html b/reference/corr_pairs_validate.html index 77377271..040995c7 100644 --- a/reference/corr_pairs_validate.html +++ b/reference/corr_pairs_validate.html @@ -38,7 +38,7 @@
diff --git a/reference/correlation_pairs.html b/reference/correlation_pairs.html index 0a162bfa..01efa738 100644 --- a/reference/correlation_pairs.html +++ b/reference/correlation_pairs.html @@ -38,7 +38,7 @@
diff --git a/reference/create-column.html b/reference/create-column.html index 8239e14c..df471d5a 100644 --- a/reference/create-column.html +++ b/reference/create-column.html @@ -38,7 +38,7 @@
diff --git a/reference/create_baseline.html b/reference/create_baseline.html index 87e74f39..e3765aa5 100644 --- a/reference/create_baseline.html +++ b/reference/create_baseline.html @@ -38,7 +38,7 @@
@@ -100,7 +100,7 @@

Examples

mtcars |> create_baseline(by.var = "gear", add.p = "yes" == "yes")
-
+
Characteristic 3
@@ -188,7 +188,7 @@ N = 5
1 (20)
1 Kruskal-Wallis rank sum test; Fisher’s exact test
mtcars |> create_baseline(by.var = "gear", detail_level = "extended") -
+
Characteristic 3
@@ -321,7 +321,7 @@ N = 5
0 (0) 0 (0) 1 (20)
mtcars |> create_baseline(by.var = "gear", detail_level = "extended",type = list(gtsummary::all_dichotomous() ~ "categorical"),theme="nejm") -
+
Characteristic 3
@@ -402,7 +402,7 @@ N = 5
1 (20)
1 Median (IQR); n (%)
create_baseline(default_parsing(mtcars), by.var = "am", add.p = FALSE, add.overall = FALSE, theme = "lancet") -
+
Characteristic FALSE
diff --git a/reference/create_log_tics.html b/reference/create_log_tics.html index f73a9480..999a81d9 100644 --- a/reference/create_log_tics.html +++ b/reference/create_log_tics.html @@ -38,7 +38,7 @@
@@ -67,7 +67,7 @@

Examples

c(sample(seq(.1, 1, .1), 3), sample(1:10, 3)) |> create_log_tics()
-#>  [1]  0.10  0.20  0.30  0.50  0.90  1.00  1.11  2.00  3.33  5.00 10.00
+#>  [1]  0.10  0.12  0.20  0.25  0.50  1.00  2.00  4.00  5.00  8.00 10.00