diff --git a/LICENSE.html b/LICENSE.html
index 8f413bdc..fe47a2ce 100644
--- a/LICENSE.html
+++ b/LICENSE.html
@@ -38,7 +38,7 @@
diff --git a/QA.html b/QA.html
index 27d96e39..a5c749e6 100644
--- a/QA.html
+++ b/QA.html
@@ -38,7 +38,7 @@
diff --git a/reference/add_class_icon.html b/reference/add_class_icon.html
index 814b3524..181af999 100644
--- a/reference/add_class_icon.html
+++ b/reference/add_class_icon.html
@@ -38,7 +38,7 @@
diff --git a/reference/add_sparkline.html b/reference/add_sparkline.html
index 6a4fa292..0a57ac76 100644
--- a/reference/add_sparkline.html
+++ b/reference/add_sparkline.html
@@ -38,7 +38,7 @@
diff --git a/reference/align_axes.html b/reference/align_axes.html
index 0bad2846..963860e7 100644
--- a/reference/align_axes.html
+++ b/reference/align_axes.html
@@ -38,7 +38,7 @@
diff --git a/reference/all_but.html b/reference/all_but.html
index d13e767a..d33f2964 100644
--- a/reference/all_but.html
+++ b/reference/all_but.html
@@ -38,7 +38,7 @@
diff --git a/reference/append_column.html b/reference/append_column.html
index ee1459e2..6ff554ca 100644
--- a/reference/append_column.html
+++ b/reference/append_column.html
@@ -38,7 +38,7 @@
diff --git a/reference/append_list.html b/reference/append_list.html
index 897262c8..d08b7bd2 100644
--- a/reference/append_list.html
+++ b/reference/append_list.html
@@ -38,7 +38,7 @@
diff --git a/reference/argsstring2list.html b/reference/argsstring2list.html
index 79b5df5a..a7069a0b 100644
--- a/reference/argsstring2list.html
+++ b/reference/argsstring2list.html
@@ -38,7 +38,7 @@
diff --git a/reference/baseline_table.html b/reference/baseline_table.html
index 2e41ac25..69178555 100644
--- a/reference/baseline_table.html
+++ b/reference/baseline_table.html
@@ -38,7 +38,7 @@
diff --git a/reference/class_icons.html b/reference/class_icons.html
index 37d063cd..d01703f8 100644
--- a/reference/class_icons.html
+++ b/reference/class_icons.html
@@ -38,7 +38,7 @@
diff --git a/reference/clean_common_axis.html b/reference/clean_common_axis.html
index 669a7975..4b67cc88 100644
--- a/reference/clean_common_axis.html
+++ b/reference/clean_common_axis.html
@@ -38,7 +38,7 @@
diff --git a/reference/clean_date.html b/reference/clean_date.html
index f55efd6a..5b2df9c6 100644
--- a/reference/clean_date.html
+++ b/reference/clean_date.html
@@ -38,7 +38,7 @@
diff --git a/reference/clean_sep.html b/reference/clean_sep.html
index 8f1eff75..c4952379 100644
--- a/reference/clean_sep.html
+++ b/reference/clean_sep.html
@@ -38,7 +38,7 @@
diff --git a/reference/columnSelectInput.html b/reference/columnSelectInput.html
index 808655ac..ab220fa8 100644
--- a/reference/columnSelectInput.html
+++ b/reference/columnSelectInput.html
@@ -40,7 +40,7 @@ Adds the option to select "none" which is handled later'>
diff --git a/reference/compare_missings.html b/reference/compare_missings.html
index a00bff74..81335488 100644
--- a/reference/compare_missings.html
+++ b/reference/compare_missings.html
@@ -38,7 +38,7 @@
diff --git a/reference/contrast_text.html b/reference/contrast_text.html
index bae74964..574a4b22 100644
--- a/reference/contrast_text.html
+++ b/reference/contrast_text.html
@@ -40,7 +40,7 @@ background color.">
diff --git a/reference/create-column.html b/reference/create-column.html
index e72f1ff3..74aaf1bb 100644
--- a/reference/create-column.html
+++ b/reference/create-column.html
@@ -38,7 +38,7 @@
diff --git a/reference/create_baseline.html b/reference/create_baseline.html
index 0f4dbf22..a3124097 100644
--- a/reference/create_baseline.html
+++ b/reference/create_baseline.html
@@ -38,7 +38,7 @@
diff --git a/reference/create_log_tics.html b/reference/create_log_tics.html
index e64b2bb9..0bf7c7a6 100644
--- a/reference/create_log_tics.html
+++ b/reference/create_log_tics.html
@@ -38,7 +38,7 @@
diff --git a/reference/create_overview_datagrid.html b/reference/create_overview_datagrid.html
index a41beaf1..1a29bedb 100644
--- a/reference/create_overview_datagrid.html
+++ b/reference/create_overview_datagrid.html
@@ -38,7 +38,7 @@
diff --git a/reference/custom_theme.html b/reference/custom_theme.html
index 85cfadf9..7a7a4ae6 100644
--- a/reference/custom_theme.html
+++ b/reference/custom_theme.html
@@ -38,7 +38,7 @@
diff --git a/reference/cut-variable.html b/reference/cut-variable.html
index 6b5255ee..9b5eb924 100644
--- a/reference/cut-variable.html
+++ b/reference/cut-variable.html
@@ -38,7 +38,7 @@
diff --git a/reference/cut_var.html b/reference/cut_var.html
index 301604c2..79ef6972 100644
--- a/reference/cut_var.html
+++ b/reference/cut_var.html
@@ -38,7 +38,7 @@
diff --git a/reference/data-correlations.html b/reference/data-correlations.html
index edeb89e3..85dd4cb1 100644
--- a/reference/data-correlations.html
+++ b/reference/data-correlations.html
@@ -38,7 +38,7 @@
diff --git a/reference/data-import.html b/reference/data-import.html
index 2ae92f6e..7af1c55d 100644
--- a/reference/data-import.html
+++ b/reference/data-import.html
@@ -38,7 +38,7 @@
diff --git a/reference/data-missings.html b/reference/data-missings.html
index c8bf27c5..393e71c8 100644
--- a/reference/data-missings.html
+++ b/reference/data-missings.html
@@ -40,7 +40,7 @@ Data correlations evaluation module">
diff --git a/reference/data-plots.html b/reference/data-plots.html
index ba7a9caf..b2e3a4be 100644
--- a/reference/data-plots.html
+++ b/reference/data-plots.html
@@ -56,7 +56,7 @@ Beatiful violin plot">
diff --git a/reference/data-summary.html b/reference/data-summary.html
index 0913042e..25095c07 100644
--- a/reference/data-summary.html
+++ b/reference/data-summary.html
@@ -38,7 +38,7 @@
diff --git a/reference/data_description.html b/reference/data_description.html
index e49add82..c247e5ad 100644
--- a/reference/data_description.html
+++ b/reference/data_description.html
@@ -38,7 +38,7 @@
diff --git a/reference/data_summary_gather.html b/reference/data_summary_gather.html
index 84dcd5a6..94ecb374 100644
--- a/reference/data_summary_gather.html
+++ b/reference/data_summary_gather.html
@@ -38,7 +38,7 @@
diff --git a/reference/data_type.html b/reference/data_type.html
index 2979b0f0..52fff594 100644
--- a/reference/data_type.html
+++ b/reference/data_type.html
@@ -40,7 +40,7 @@ meaningful "clinical" data type.'>
diff --git a/reference/data_type_filter.html b/reference/data_type_filter.html
index 099c2147..6ce84c0d 100644
--- a/reference/data_type_filter.html
+++ b/reference/data_type_filter.html
@@ -38,7 +38,7 @@
diff --git a/reference/data_types.html b/reference/data_types.html
index 0bacde98..4b643577 100644
--- a/reference/data_types.html
+++ b/reference/data_types.html
@@ -38,7 +38,7 @@
diff --git a/reference/default_format_arguments.html b/reference/default_format_arguments.html
index a1681b3a..b78a0b1a 100644
--- a/reference/default_format_arguments.html
+++ b/reference/default_format_arguments.html
@@ -38,7 +38,7 @@
diff --git a/reference/default_parsing.html b/reference/default_parsing.html
index 010a0b76..5cc57531 100644
--- a/reference/default_parsing.html
+++ b/reference/default_parsing.html
@@ -38,7 +38,7 @@
diff --git a/reference/drop_empty_event.html b/reference/drop_empty_event.html
index 98c1e267..b90dacbb 100644
--- a/reference/drop_empty_event.html
+++ b/reference/drop_empty_event.html
@@ -38,7 +38,7 @@
diff --git a/reference/expression_string.html b/reference/expression_string.html
index 63e5c064..5d01aa2a 100644
--- a/reference/expression_string.html
+++ b/reference/expression_string.html
@@ -38,7 +38,7 @@
diff --git a/reference/factorize.html b/reference/factorize.html
index 7df1fb4e..07c4f3bc 100644
--- a/reference/factorize.html
+++ b/reference/factorize.html
@@ -38,7 +38,7 @@
diff --git a/reference/file_export.html b/reference/file_export.html
index 62eb430d..e4686745 100644
--- a/reference/file_export.html
+++ b/reference/file_export.html
@@ -38,7 +38,7 @@
diff --git a/reference/format_writer.html b/reference/format_writer.html
index 3549fd99..2039696b 100644
--- a/reference/format_writer.html
+++ b/reference/format_writer.html
@@ -38,7 +38,7 @@
diff --git a/reference/get_fun_options.html b/reference/get_fun_options.html
index b297c623..ece83989 100644
--- a/reference/get_fun_options.html
+++ b/reference/get_fun_options.html
@@ -38,7 +38,7 @@
diff --git a/reference/get_label.html b/reference/get_label.html
index e266e8d0..265d8c4c 100644
--- a/reference/get_label.html
+++ b/reference/get_label.html
@@ -38,7 +38,7 @@
diff --git a/reference/get_plot_options.html b/reference/get_plot_options.html
index 9fd77a97..4e557e80 100644
--- a/reference/get_plot_options.html
+++ b/reference/get_plot_options.html
@@ -38,7 +38,7 @@
diff --git a/reference/get_var_icon.html b/reference/get_var_icon.html
index 4cd43972..d9633ddc 100644
--- a/reference/get_var_icon.html
+++ b/reference/get_var_icon.html
@@ -38,7 +38,7 @@
diff --git a/reference/getfun.html b/reference/getfun.html
index 8644aae9..2448372f 100644
--- a/reference/getfun.html
+++ b/reference/getfun.html
@@ -38,7 +38,7 @@
@@ -139,7 +139,7 @@
#> z$qr <- NULL
#> z
#> }
-#> <bytecode: 0x5606c01b6b18>
+#> <bytecode: 0x565449fb4620>
#> <environment: namespace:stats>
diff --git a/reference/gg_theme_export.html b/reference/gg_theme_export.html
index c5e135ee..dc9528c8 100644
--- a/reference/gg_theme_export.html
+++ b/reference/gg_theme_export.html
@@ -38,7 +38,7 @@
diff --git a/reference/gg_theme_shiny.html b/reference/gg_theme_shiny.html
index 4ad2de33..9870e838 100644
--- a/reference/gg_theme_shiny.html
+++ b/reference/gg_theme_shiny.html
@@ -38,7 +38,7 @@
diff --git a/reference/ggeulerr.html b/reference/ggeulerr.html
index e9415988..d03a6333 100644
--- a/reference/ggeulerr.html
+++ b/reference/ggeulerr.html
@@ -42,7 +42,7 @@ but plots it using ggplot2">
diff --git a/reference/grepl_fix.html b/reference/grepl_fix.html
index f97965d4..ad282de7 100644
--- a/reference/grepl_fix.html
+++ b/reference/grepl_fix.html
@@ -38,7 +38,7 @@
diff --git a/reference/if_not_missing.html b/reference/if_not_missing.html
index ac8c30b9..41cab386 100644
--- a/reference/if_not_missing.html
+++ b/reference/if_not_missing.html
@@ -38,7 +38,7 @@
diff --git a/reference/import-file-type.html b/reference/import-file-type.html
index 322a7db1..c8afd044 100644
--- a/reference/import-file-type.html
+++ b/reference/import-file-type.html
@@ -38,7 +38,7 @@
diff --git a/reference/import-file.html b/reference/import-file.html
index 4d1eb16e..6329c8e0 100644
--- a/reference/import-file.html
+++ b/reference/import-file.html
@@ -38,7 +38,7 @@
diff --git a/reference/import-file_module.html b/reference/import-file_module.html
index b1be0cac..127982c2 100644
--- a/reference/import-file_module.html
+++ b/reference/import-file_module.html
@@ -38,7 +38,7 @@
diff --git a/reference/index_embed.html b/reference/index_embed.html
index b7e7364d..2eb4de65 100644
--- a/reference/index_embed.html
+++ b/reference/index_embed.html
@@ -38,7 +38,7 @@
diff --git a/reference/is_any_class.html b/reference/is_any_class.html
index 4b2414db..4e440806 100644
--- a/reference/is_any_class.html
+++ b/reference/is_any_class.html
@@ -38,7 +38,7 @@
diff --git a/reference/is_consecutive.html b/reference/is_consecutive.html
index c25d290b..790d8022 100644
--- a/reference/is_consecutive.html
+++ b/reference/is_consecutive.html
@@ -38,7 +38,7 @@
diff --git a/reference/is_datetime.html b/reference/is_datetime.html
index 5bc4036c..c3282d8b 100644
--- a/reference/is_datetime.html
+++ b/reference/is_datetime.html
@@ -38,7 +38,7 @@
diff --git a/reference/is_identical_to_previous.html b/reference/is_identical_to_previous.html
index d0bca2ad..2c3d0206 100644
--- a/reference/is_identical_to_previous.html
+++ b/reference/is_identical_to_previous.html
@@ -38,7 +38,7 @@
diff --git a/reference/is_valid_redcap_url.html b/reference/is_valid_redcap_url.html
index 7b645063..8c82e947 100644
--- a/reference/is_valid_redcap_url.html
+++ b/reference/is_valid_redcap_url.html
@@ -38,7 +38,7 @@
diff --git a/reference/is_valid_token.html b/reference/is_valid_token.html
index 2bc1ba0a..3fa464a5 100644
--- a/reference/is_valid_token.html
+++ b/reference/is_valid_token.html
@@ -38,7 +38,7 @@
diff --git a/reference/launch_FreesearchR.html b/reference/launch_FreesearchR.html
index d19475b0..55aa7c6d 100644
--- a/reference/launch_FreesearchR.html
+++ b/reference/launch_FreesearchR.html
@@ -38,7 +38,7 @@
diff --git a/reference/limit_log.html b/reference/limit_log.html
index a87a3a33..5846574b 100644
--- a/reference/limit_log.html
+++ b/reference/limit_log.html
@@ -38,7 +38,7 @@
diff --git a/reference/line_break.html b/reference/line_break.html
index db938418..5f954098 100644
--- a/reference/line_break.html
+++ b/reference/line_break.html
@@ -38,7 +38,7 @@
diff --git a/reference/merge_expression.html b/reference/merge_expression.html
index c89d18b3..ee75d320 100644
--- a/reference/merge_expression.html
+++ b/reference/merge_expression.html
@@ -38,7 +38,7 @@
diff --git a/reference/merge_long.html b/reference/merge_long.html
index b3a7bb1a..ad6b16bd 100644
--- a/reference/merge_long.html
+++ b/reference/merge_long.html
@@ -38,7 +38,7 @@
diff --git a/reference/missing_fraction.html b/reference/missing_fraction.html
index ba577e09..d81e25b8 100644
--- a/reference/missing_fraction.html
+++ b/reference/missing_fraction.html
@@ -38,7 +38,7 @@
diff --git a/reference/missings_apex_plot.html b/reference/missings_apex_plot.html
index 65a14a5f..d3cbb0d8 100644
--- a/reference/missings_apex_plot.html
+++ b/reference/missings_apex_plot.html
@@ -38,7 +38,7 @@
diff --git a/reference/modify_qmd.html b/reference/modify_qmd.html
index 4cc52172..9b9ee122 100644
--- a/reference/modify_qmd.html
+++ b/reference/modify_qmd.html
@@ -38,7 +38,7 @@
diff --git a/reference/overview_vars.html b/reference/overview_vars.html
index 847c8030..542e9ed7 100644
--- a/reference/overview_vars.html
+++ b/reference/overview_vars.html
@@ -38,7 +38,7 @@
diff --git a/reference/pipe_string.html b/reference/pipe_string.html
index 1df24a70..bd6c96cd 100644
--- a/reference/pipe_string.html
+++ b/reference/pipe_string.html
@@ -38,7 +38,7 @@
diff --git a/reference/plot.tbl_regression.html b/reference/plot.tbl_regression.html
index 9b359d05..17f8f138 100644
--- a/reference/plot.tbl_regression.html
+++ b/reference/plot.tbl_regression.html
@@ -38,7 +38,7 @@
diff --git a/reference/plot_euler.html b/reference/plot_euler.html
index a1665b75..08a6f74a 100644
--- a/reference/plot_euler.html
+++ b/reference/plot_euler.html
@@ -38,7 +38,7 @@
diff --git a/reference/plot_euler_single.html b/reference/plot_euler_single.html
index 1b69eb9c..7875f483 100644
--- a/reference/plot_euler_single.html
+++ b/reference/plot_euler_single.html
@@ -38,7 +38,7 @@
diff --git a/reference/plot_sankey_single.html b/reference/plot_sankey_single.html
index 27e2ba83..62bce9f8 100644
--- a/reference/plot_sankey_single.html
+++ b/reference/plot_sankey_single.html
@@ -38,7 +38,7 @@
diff --git a/reference/possible_functions.html b/reference/possible_functions.html
index 5d455180..d7327414 100644
--- a/reference/possible_functions.html
+++ b/reference/possible_functions.html
@@ -38,7 +38,7 @@
diff --git a/reference/possible_plots.html b/reference/possible_plots.html
index 7700f9ff..edea3eb5 100644
--- a/reference/possible_plots.html
+++ b/reference/possible_plots.html
@@ -38,7 +38,7 @@
diff --git a/reference/read_input.html b/reference/read_input.html
index c5d9979d..d9bec134 100644
--- a/reference/read_input.html
+++ b/reference/read_input.html
@@ -38,7 +38,7 @@
diff --git a/reference/redcap_read_shiny_module.html b/reference/redcap_read_shiny_module.html
index 0f42515c..f206bcaf 100644
--- a/reference/redcap_read_shiny_module.html
+++ b/reference/redcap_read_shiny_module.html
@@ -40,7 +40,7 @@ Test app for the redcap_read_shiny_module">
diff --git a/reference/regression_model.html b/reference/regression_model.html
index 5312fa39..2c33fc6b 100644
--- a/reference/regression_model.html
+++ b/reference/regression_model.html
@@ -38,7 +38,7 @@
diff --git a/reference/regression_table.html b/reference/regression_table.html
index 392124cc..1075dd2b 100644
--- a/reference/regression_table.html
+++ b/reference/regression_table.html
@@ -38,7 +38,7 @@
diff --git a/reference/regression_table_create.html b/reference/regression_table_create.html
index f9d1dbd9..85188a35 100644
--- a/reference/regression_table_create.html
+++ b/reference/regression_table_create.html
@@ -38,7 +38,7 @@
diff --git a/reference/remove_empty_attr.html b/reference/remove_empty_attr.html
index b0781829..f0baea86 100644
--- a/reference/remove_empty_attr.html
+++ b/reference/remove_empty_attr.html
@@ -38,7 +38,7 @@
diff --git a/reference/remove_empty_cols.html b/reference/remove_empty_cols.html
index b2757bc5..5298db35 100644
--- a/reference/remove_empty_cols.html
+++ b/reference/remove_empty_cols.html
@@ -38,7 +38,7 @@
diff --git a/reference/remove_nested_list.html b/reference/remove_nested_list.html
index 594d701b..e6cf9dfc 100644
--- a/reference/remove_nested_list.html
+++ b/reference/remove_nested_list.html
@@ -38,7 +38,7 @@
diff --git a/reference/repeated_instruments.html b/reference/repeated_instruments.html
index ed5ce168..5067bc70 100644
--- a/reference/repeated_instruments.html
+++ b/reference/repeated_instruments.html
@@ -38,7 +38,7 @@
diff --git a/reference/selectInputIcon.html b/reference/selectInputIcon.html
index e453f7d3..16af1d46 100644
--- a/reference/selectInputIcon.html
+++ b/reference/selectInputIcon.html
@@ -40,7 +40,7 @@ after, or on both sides of a classic selectInput.">
diff --git a/reference/set_column_label.html b/reference/set_column_label.html
index bb6bf3dd..7f512b20 100644
--- a/reference/set_column_label.html
+++ b/reference/set_column_label.html
@@ -38,7 +38,7 @@
diff --git a/reference/show_data.html b/reference/show_data.html
index 4f164eac..2887ee82 100644
--- a/reference/show_data.html
+++ b/reference/show_data.html
@@ -38,7 +38,7 @@
diff --git a/reference/simple_snake.html b/reference/simple_snake.html
index 716c75a4..de26b77b 100644
--- a/reference/simple_snake.html
+++ b/reference/simple_snake.html
@@ -38,7 +38,7 @@
diff --git a/reference/sort_by.html b/reference/sort_by.html
index 148f737b..becaed15 100644
--- a/reference/sort_by.html
+++ b/reference/sort_by.html
@@ -38,7 +38,7 @@
diff --git a/reference/specify_qmd_format.html b/reference/specify_qmd_format.html
index c4f4accf..444a6494 100644
--- a/reference/specify_qmd_format.html
+++ b/reference/specify_qmd_format.html
@@ -38,7 +38,7 @@
diff --git a/reference/subset_types.html b/reference/subset_types.html
index f9b47c7c..366a544c 100644
--- a/reference/subset_types.html
+++ b/reference/subset_types.html
@@ -38,7 +38,7 @@
diff --git a/reference/supported_functions.html b/reference/supported_functions.html
index 8a771f4e..c26d9d47 100644
--- a/reference/supported_functions.html
+++ b/reference/supported_functions.html
@@ -40,7 +40,7 @@ unique for each element on list.'>
diff --git a/reference/supported_plots.html b/reference/supported_plots.html
index 85181d72..d3a625e4 100644
--- a/reference/supported_plots.html
+++ b/reference/supported_plots.html
@@ -54,7 +54,7 @@ tertiary.type: Tertiary variable data type (continuous, dichotomous or ordinal)
diff --git a/reference/symmetrical_scale_x_log10.html b/reference/symmetrical_scale_x_log10.html
index ceb5697f..5c04e72b 100644
--- a/reference/symmetrical_scale_x_log10.html
+++ b/reference/symmetrical_scale_x_log10.html
@@ -38,7 +38,7 @@
diff --git a/reference/tbl_merge.html b/reference/tbl_merge.html
index 167896ce..41542a60 100644
--- a/reference/tbl_merge.html
+++ b/reference/tbl_merge.html
@@ -40,7 +40,7 @@ spanner names.">
diff --git a/reference/type_icons.html b/reference/type_icons.html
index ea5b6ad5..9ab1d727 100644
--- a/reference/type_icons.html
+++ b/reference/type_icons.html
@@ -38,7 +38,7 @@
diff --git a/reference/ui_elements.html b/reference/ui_elements.html
index b7d8cbde..9f5a8503 100644
--- a/reference/ui_elements.html
+++ b/reference/ui_elements.html
@@ -38,7 +38,7 @@
diff --git a/reference/unique_short.html b/reference/unique_short.html
index c43599f2..ad020c08 100644
--- a/reference/unique_short.html
+++ b/reference/unique_short.html
@@ -40,7 +40,7 @@ strings.">
diff --git a/reference/update-factor.html b/reference/update-factor.html
index 1b9e7540..679ce28c 100644
--- a/reference/update-factor.html
+++ b/reference/update-factor.html
@@ -38,7 +38,7 @@
diff --git a/reference/update-variables.html b/reference/update-variables.html
index 25147414..edaace0c 100644
--- a/reference/update-variables.html
+++ b/reference/update-variables.html
@@ -38,7 +38,7 @@
diff --git a/reference/update_variables_datagrid.html b/reference/update_variables_datagrid.html
index cd2e84d1..575e88e3 100644
--- a/reference/update_variables_datagrid.html
+++ b/reference/update_variables_datagrid.html
@@ -38,7 +38,7 @@
diff --git a/reference/vectorSelectInput.html b/reference/vectorSelectInput.html
index 1e640c89..e2d7f6e2 100644
--- a/reference/vectorSelectInput.html
+++ b/reference/vectorSelectInput.html
@@ -38,7 +38,7 @@
diff --git a/reference/vertical_stacked_bars.html b/reference/vertical_stacked_bars.html
index 967ff8d0..81d7a356 100644
--- a/reference/vertical_stacked_bars.html
+++ b/reference/vertical_stacked_bars.html
@@ -38,7 +38,7 @@
diff --git a/reference/visual_summary.html b/reference/visual_summary.html
index fac7567c..bdb1957e 100644
--- a/reference/visual_summary.html
+++ b/reference/visual_summary.html
@@ -38,7 +38,7 @@
diff --git a/reference/wide2long.html b/reference/wide2long.html
index a16dad74..58505602 100644
--- a/reference/wide2long.html
+++ b/reference/wide2long.html
@@ -42,7 +42,7 @@ an added "ignore" string pattern or similarly. Example 2.'>
diff --git a/reference/wrap_plot_list.html b/reference/wrap_plot_list.html
index 855ba708..2d5849b6 100644
--- a/reference/wrap_plot_list.html
+++ b/reference/wrap_plot_list.html
@@ -38,7 +38,7 @@
diff --git a/reference/write_quarto.html b/reference/write_quarto.html
index 0312ab8e..20d598cc 100644
--- a/reference/write_quarto.html
+++ b/reference/write_quarto.html
@@ -38,7 +38,7 @@
diff --git a/search.json b/search.json
index 181d9b51..3c3efbaf 100644
--- a/search.json
+++ b/search.json
@@ -1 +1 @@
-[{"path":[]},{"path":"https://agdamsbo.github.io/FreesearchR/CODE_OF_CONDUCT.html","id":"our-pledge","dir":"","previous_headings":"","what":"Our Pledge","title":"Contributor Covenant Code of Conduct","text":"members, contributors, leaders pledge make participation community harassment-free experience everyone, regardless age, body size, visible invisible disability, ethnicity, sex characteristics, gender identity expression, level experience, education, socio-economic status, nationality, personal appearance, race, caste, color, religion, sexual identity orientation. pledge act interact ways contribute open, welcoming, diverse, inclusive, healthy community.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/CODE_OF_CONDUCT.html","id":"our-standards","dir":"","previous_headings":"","what":"Our Standards","title":"Contributor Covenant Code of Conduct","text":"Examples behavior contributes positive environment community include: Demonstrating empathy kindness toward people respectful differing opinions, viewpoints, experiences Giving gracefully accepting constructive feedback Accepting responsibility apologizing affected mistakes, learning experience Focusing best just us individuals, overall community Examples unacceptable behavior include: use sexualized language imagery, sexual attention advances kind Trolling, insulting derogatory comments, personal political attacks Public private harassment Publishing others’ private information, physical email address, without explicit permission conduct reasonably considered inappropriate professional setting","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/CODE_OF_CONDUCT.html","id":"enforcement-responsibilities","dir":"","previous_headings":"","what":"Enforcement Responsibilities","title":"Contributor Covenant Code of Conduct","text":"Community leaders responsible clarifying enforcing standards acceptable behavior take appropriate fair corrective action response behavior deem inappropriate, threatening, offensive, harmful. Community leaders right responsibility remove, edit, reject comments, commits, code, wiki edits, issues, contributions aligned Code Conduct, communicate reasons moderation decisions appropriate.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/CODE_OF_CONDUCT.html","id":"scope","dir":"","previous_headings":"","what":"Scope","title":"Contributor Covenant Code of Conduct","text":"Code Conduct applies within community spaces, also applies individual officially representing community public spaces. Examples representing community include using official e-mail address, posting via official social media account, acting appointed representative online offline event.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/CODE_OF_CONDUCT.html","id":"enforcement","dir":"","previous_headings":"","what":"Enforcement","title":"Contributor Covenant Code of Conduct","text":"Instances abusive, harassing, otherwise unacceptable behavior may reported community leaders responsible enforcement agdamsbo@clin.au.dk. complaints reviewed investigated promptly fairly. community leaders obligated respect privacy security reporter incident.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/CODE_OF_CONDUCT.html","id":"enforcement-guidelines","dir":"","previous_headings":"","what":"Enforcement Guidelines","title":"Contributor Covenant Code of Conduct","text":"Community leaders follow Community Impact Guidelines determining consequences action deem violation Code Conduct:","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/CODE_OF_CONDUCT.html","id":"id_1-correction","dir":"","previous_headings":"Enforcement Guidelines","what":"1. Correction","title":"Contributor Covenant Code of Conduct","text":"Community Impact: Use inappropriate language behavior deemed unprofessional unwelcome community. Consequence: private, written warning community leaders, providing clarity around nature violation explanation behavior inappropriate. public apology may requested.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/CODE_OF_CONDUCT.html","id":"id_2-warning","dir":"","previous_headings":"Enforcement Guidelines","what":"2. Warning","title":"Contributor Covenant Code of Conduct","text":"Community Impact: violation single incident series actions. Consequence: warning consequences continued behavior. interaction people involved, including unsolicited interaction enforcing Code Conduct, specified period time. includes avoiding interactions community spaces well external channels like social media. Violating terms may lead temporary permanent ban.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/CODE_OF_CONDUCT.html","id":"id_3-temporary-ban","dir":"","previous_headings":"Enforcement Guidelines","what":"3. Temporary Ban","title":"Contributor Covenant Code of Conduct","text":"Community Impact: serious violation community standards, including sustained inappropriate behavior. Consequence: temporary ban sort interaction public communication community specified period time. public private interaction people involved, including unsolicited interaction enforcing Code Conduct, allowed period. Violating terms may lead permanent ban.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/CODE_OF_CONDUCT.html","id":"id_4-permanent-ban","dir":"","previous_headings":"Enforcement Guidelines","what":"4. Permanent Ban","title":"Contributor Covenant Code of Conduct","text":"Community Impact: Demonstrating pattern violation community standards, including sustained inappropriate behavior, harassment individual, aggression toward disparagement classes individuals. Consequence: permanent ban sort public interaction within community.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/CODE_OF_CONDUCT.html","id":"attribution","dir":"","previous_headings":"","what":"Attribution","title":"Contributor Covenant Code of Conduct","text":"Code Conduct adapted Contributor Covenant, version 2.1, available https://www.contributor-covenant.org/version/2/1/code_of_conduct.html. Community Impact Guidelines inspired [Mozilla’s code conduct enforcement ladder][https://github.com/mozilla/inclusion]. answers common questions code conduct, see FAQ https://www.contributor-covenant.org/faq. Translations available https://www.contributor-covenant.org/translations.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/LICENSE.html","id":null,"dir":"","previous_headings":"","what":"GNU Affero General Public License","title":"GNU Affero General Public License","text":"Version 3, 19 November 2007 Copyright (C) 2007 Free Software Foundation, Inc. Copyright (C) This program is free software: you can redistribute it and/or modify it under the terms of the GNU Affero General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Affero General Public License for more details. You should have received a copy of the GNU Affero General Public License along with this program. If not, see
diff --git a/ROADMAP.html b/ROADMAP.html
index 3d77a0bd..ff451c1a 100644
--- a/ROADMAP.html
+++ b/ROADMAP.html
@@ -38,7 +38,7 @@
@@ -133,7 +133,7 @@ packages and the latest build info.
date
-2025-07-03
+2025-07-22
rstudio
@@ -149,7 +149,7 @@ packages and the latest build info.
FreesearchR
-25.7.2.250703
+25.7.2.250722
@@ -211,8 +211,8 @@ packages and the latest build info.
bayestestR
-0.15.3
-2025-04-28
+0.16.1
+2025-07-01
CRAN (R 4.4.1)
@@ -277,14 +277,14 @@ packages and the latest build info.
cards
-0.6.0
-2025-04-11
+0.6.1
+2025-07-03
CRAN (R 4.4.1)
cardx
-0.2.4
-2025-04-12
+0.2.5
+2025-07-03
CRAN (R 4.4.1)
@@ -349,8 +349,8 @@ packages and the latest build info.
commonmark
-1.9.5
-2025-03-17
+2.0.0
+2025-07-07
CRAN (R 4.4.1)
@@ -360,27 +360,15 @@ packages and the latest build info.
CRAN (R 4.4.1)
-credentials
-2.0.2
-2024-10-04
-CRAN (R 4.4.1)
-
-
-crosstalk
-1.2.1
-2023-11-23
-CRAN (R 4.4.0)
-
-
curl
-6.2.2
-2025-03-24
+6.4.0
+2025-06-22
CRAN (R 4.4.1)
data.table
-1.17.0
-2025-02-22
+1.17.8
+2025-07-10
CRAN (R 4.4.1)
@@ -391,8 +379,8 @@ packages and the latest build info.
datawizard
-1.0.2
-2025-03-24
+1.2.0
+2025-07-17
CRAN (R 4.4.1)
@@ -457,146 +445,134 @@ packages and the latest build info.
easystats
-0.7.4
-2025-02-06
+0.7.5
+2025-07-11
CRAN (R 4.4.1)
-effectsize
-1.0.0
-2024-12-10
-CRAN (R 4.4.1)
-
-
ellipsis
0.3.2
2021-04-29
CRAN (R 4.4.1)
-
+
emmeans
-1.11.1
-2025-05-04
+1.11.2
+2025-07-11
CRAN (R 4.4.1)
-
+
esquisse
2.1.0
2025-02-21
CRAN (R 4.4.1)
-
+
estimability
1.5.1
2024-05-12
CRAN (R 4.4.0)
-
+
eulerr
7.0.2
2024-03-28
CRAN (R 4.4.0)
-
+
evaluate
-1.0.3
-2025-01-10
+1.0.4
+2025-06-18
CRAN (R 4.4.1)
-
+
farver
2.1.2
2024-05-13
CRAN (R 4.4.1)
-
+
fastmap
1.2.0
2024-05-15
CRAN (R 4.4.1)
-
+
flextable
-0.9.7
-2024-10-27
+0.9.9
+2025-05-31
CRAN (R 4.4.1)
-
+
fontawesome
0.5.3
2024-11-16
CRAN (R 4.4.1)
-
+
fontBitstreamVera
0.1.1
2017-02-01
CRAN (R 4.4.1)
-
+
fontLiberation
0.1.0
2016-10-15
CRAN (R 4.4.1)
-
+
fontquiver
0.2.1
2017-02-01
CRAN (R 4.4.0)
-
+
forcats
1.0.0
2023-01-29
CRAN (R 4.4.0)
-
+
foreach
1.5.2
2022-02-02
CRAN (R 4.4.0)
-
+
foreign
0.8-90
2025-03-31
CRAN (R 4.4.1)
-
+
Formula
1.2-5
2023-02-24
CRAN (R 4.4.1)
-
+
FreesearchR
25.7.2
NA
NA
-
+
fs
1.6.6
2025-04-12
CRAN (R 4.4.1)
-
+
gdtools
0.4.2
2025-03-27
CRAN (R 4.4.1)
-
-generics
-0.1.3
-2022-07-05
-CRAN (R 4.4.1)
-
-gert
-2.1.5
-2025-03-25
+generics
+0.1.4
+2025-05-09
CRAN (R 4.4.1)
@@ -613,9 +589,9 @@ packages and the latest build info.
ggforce
-0.4.2
-2024-02-19
-CRAN (R 4.4.0)
+0.5.0
+2025-06-18
+CRAN (R 4.4.1)
ggplot2
@@ -631,20 +607,8 @@ packages and the latest build info.
ggstats
-0.9.0
-2025-03-10
-CRAN (R 4.4.1)
-
-
-gh
-1.4.1
-2024-03-28
-CRAN (R 4.4.0)
-
-
-gitcreds
-0.1.2
-2022-09-08
+0.10.0
+2025-07-02
CRAN (R 4.4.1)
@@ -673,15 +637,15 @@ packages and the latest build info.
gtsummary
-2.2.0
-2025-04-14
+2.3.0
+2025-07-03
CRAN (R 4.4.1)
haven
-2.5.4
-2023-11-30
-CRAN (R 4.4.0)
+2.5.5
+2025-05-30
+CRAN (R 4.4.1)
here
@@ -726,77 +690,65 @@ packages and the latest build info.
CRAN (R 4.4.1)
-httr2
-1.1.2
-2025-03-26
-CRAN (R 4.4.1)
-
-
IDEAFilter
0.2.0
2024-04-15
CRAN (R 4.4.0)
-
+
insight
-1.2.0
-2025-04-22
+1.3.1
+2025-06-30
CRAN (R 4.4.1)
-
+
iterators
1.0.14
2022-02-05
CRAN (R 4.4.1)
-
+
jquerylib
0.1.4
2021-04-26
CRAN (R 4.4.0)
-
+
jsonlite
2.0.0
2025-03-27
CRAN (R 4.4.1)
-
+
jsonvalidate
1.5.0
2025-02-07
CRAN (R 4.4.1)
-
+
KernSmooth
2.23-26
2025-01-01
CRAN (R 4.4.1)
-
-keyring
-1.3.2
-2023-12-11
-CRAN (R 4.4.0)
-
+keyring
+1.4.1
+2025-06-15
+CRAN (R 4.4.1)
+
+
knitr
1.50
2025-03-16
CRAN (R 4.4.1)
-
+
labeling
0.4.3
2023-08-29
CRAN (R 4.4.1)
-
-labelled
-2.14.0
-2025-01-08
-CRAN (R 4.4.1)
-
later
1.4.2
@@ -864,473 +816,437 @@ packages and the latest build info.
CRAN (R 4.4.0)
-mgcv
-1.9-3
-2025-04-04
-CRAN (R 4.4.1)
-
-
mime
0.13
2025-03-17
CRAN (R 4.4.1)
-
+
miniUI
0.1.2
2025-04-17
CRAN (R 4.4.1)
-
+
minqa
1.2.8
2024-08-17
CRAN (R 4.4.1)
-
+
mvtnorm
1.3-3
2025-01-10
CRAN (R 4.4.1)
-
+
nlme
3.1-168
2025-03-31
CRAN (R 4.4.1)
-
+
nloptr
2.2.1
2025-03-17
CRAN (R 4.4.1)
-
+
nnet
7.3-20
2025-01-01
CRAN (R 4.4.1)
-
+
officer
-0.6.8
-2025-03-23
+0.6.10
+2025-05-30
CRAN (R 4.4.1)
-
+
opdisDownsampling
1.0.1
2024-04-15
CRAN (R 4.4.0)
-
+
openssl
-2.3.2
-2025-02-03
+2.3.3
+2025-05-26
CRAN (R 4.4.1)
-
+
openxlsx2
-1.15
-2025-04-25
+1.17
+2025-07-04
CRAN (R 4.4.1)
-
+
pak
-0.8.0.2
-2025-04-08
-CRAN (R 4.4.1)
-
-
-parameters
-0.24.2
-2025-03-04
+0.9.0
+2025-05-27
CRAN (R 4.4.1)
-patchwork
-1.3.0
-2024-09-16
+parameters
+0.27.0
+2025-07-09
CRAN (R 4.4.1)
+patchwork
+1.3.1
+2025-06-21
+CRAN (R 4.4.1)
+
+
pbmcapply
1.5.1
2022-04-28
CRAN (R 4.4.1)
-
+
performance
-0.13.0
-2025-01-15
+0.15.0
+2025-07-10
CRAN (R 4.4.1)
-
+
phosphoricons
0.2.1
2024-04-08
CRAN (R 4.4.0)
-
+
pillar
-1.10.2
-2025-04-05
+1.11.0
+2025-07-04
+CRAN (R 4.4.1)
+
+
+pkgbuild
+1.4.8
+2025-05-26
CRAN (R 4.4.1)
-pkgbuild
-1.4.7
-2025-03-24
-CRAN (R 4.4.1)
-
-
pkgconfig
2.0.3
2019-09-22
CRAN (R 4.4.1)
-
+
pkgload
1.4.0
2024-06-28
CRAN (R 4.4.0)
-
+
plyr
1.8.9
2023-10-02
CRAN (R 4.4.1)
-
+
polyclip
1.10-7
2024-07-23
CRAN (R 4.4.1)
-
+
pracma
2.4.4
2023-11-10
CRAN (R 4.4.1)
-
+
processx
3.8.6
2025-02-21
CRAN (R 4.4.1)
-
+
profvis
0.4.0
2024-09-20
CRAN (R 4.4.1)
-
+
promises
-1.3.2
-2024-11-28
+1.3.3
+2025-05-29
CRAN (R 4.4.1)
-
+
proxy
0.4-27
2022-06-09
CRAN (R 4.4.1)
-
+
ps
1.9.1
2025-04-12
CRAN (R 4.4.1)
-
+
purrr
-1.0.4
-2025-02-05
+1.1.0
+2025-07-10
CRAN (R 4.4.1)
-
+
qqconf
1.3.2
2023-04-14
CRAN (R 4.4.0)
-
+
qqplotr
0.0.6
2023-01-25
CRAN (R 4.4.0)
-
+
quarto
1.4.4
2024-07-20
CRAN (R 4.4.0)
-
-R.cache
-0.16.0
-2022-07-21
-CRAN (R 4.4.0)
-
-R.methodsS3
-1.8.2
-2022-06-13
-CRAN (R 4.4.1)
-
-
-R.oo
-1.27.0
-2024-11-01
-CRAN (R 4.4.1)
-
-
-R.utils
-2.13.0
-2025-02-24
-CRAN (R 4.4.1)
-
-
R6
2.6.1
2025-02-15
CRAN (R 4.4.1)
-
+
ragg
1.4.0
2025-04-10
CRAN (R 4.4.1)
-
+
rankinPlot
1.1.0
2023-01-30
CRAN (R 4.4.0)
-
+
rappdirs
0.3.3
2021-01-31
CRAN (R 4.4.1)
-
+
rbibutils
2.3
2024-10-04
CRAN (R 4.4.1)
-
+
RColorBrewer
1.1-3
2022-04-03
CRAN (R 4.4.1)
-
+
Rcpp
-1.0.14
-2025-01-12
+1.1.0
+2025-07-02
+CRAN (R 4.4.1)
+
+
+RcppArmadillo
+14.6.0-1
+2025-07-02
CRAN (R 4.4.1)
-RcppArmadillo
-14.4.2-1
-2025-04-25
-CRAN (R 4.4.1)
-
-
Rdpack
2.6.4
2025-04-09
CRAN (R 4.4.1)
-
+
reactable
0.4.4
2023-03-12
CRAN (R 4.4.0)
-
+
readODS
2.3.2
2025-01-13
CRAN (R 4.4.1)
-
+
readr
2.1.5
2024-01-10
CRAN (R 4.4.0)
-
+
readxl
1.4.5
2025-03-07
CRAN (R 4.4.1)
-
+
REDCapCAST
25.3.2
2025-03-10
CRAN (R 4.4.1)
-
+
REDCapR
1.4.0
2025-01-11
CRAN (R 4.4.1)
-
+
reformulas
-0.4.0
-2024-11-03
+0.4.1
+2025-04-30
CRAN (R 4.4.1)
-
+
remotes
2.5.0
2024-03-17
CRAN (R 4.4.1)
-
+
rempsyc
0.1.9
2025-02-01
CRAN (R 4.4.1)
-
+
renv
1.1.4
2025-03-20
CRAN (R 4.4.1)
-
+
reshape2
1.4.4
2020-04-09
CRAN (R 4.4.0)
-
+
rio
1.2.3
2024-09-25
CRAN (R 4.4.1)
-
+
rlang
1.1.6
2025-04-11
CRAN (R 4.4.1)
-
+
rmarkdown
2.29
2024-11-04
CRAN (R 4.4.1)
-
+
robustbase
0.99-4-1
2024-09-27
CRAN (R 4.4.1)
-
+
roxygen2
7.3.2
2024-06-28
CRAN (R 4.4.0)
-
+
rpart
4.1.24
2025-01-07
CRAN (R 4.4.1)
-
+
rprojroot
-2.0.4
-2023-11-05
+2.1.0
+2025-07-12
+CRAN (R 4.4.1)
+
+
+rsconnect
+1.5.0
+2025-06-26
CRAN (R 4.4.1)
-rsconnect
-1.3.4
-2025-01-22
-CRAN (R 4.4.1)
-
-
rstudioapi
0.17.1
2024-10-22
CRAN (R 4.4.1)
-
+
sass
0.4.10
2025-04-11
CRAN (R 4.4.1)
-
+
scales
1.4.0
2025-04-24
CRAN (R 4.4.1)
-
+
see
0.11.0
2025-03-11
CRAN (R 4.4.1)
-
+
sessioninfo
1.2.3
2025-02-05
CRAN (R 4.4.1)
-
+
shiny
-1.10.0
-2024-12-14
+1.11.1
+2025-07-03
+CRAN (R 4.4.1)
+
+
+shiny2docker
+0.0.3
+2025-06-28
CRAN (R 4.4.1)
-shiny2docker
-0.0.2
-2025-02-09
-CRAN (R 4.4.1)
-
-
shinybusy
0.3.3
2024-03-09
CRAN (R 4.4.0)
-
+
shinyjs
2.1.0
2021-12-23
CRAN (R 4.4.0)
-
+
shinyTime
1.0.3
2022-08-19
CRAN (R 4.4.0)
-
+
shinyWidgets
0.9.0
2025-02-21
CRAN (R 4.4.1)
-
-sourcetools
-0.1.7-1
-2023-02-01
-CRAN (R 4.4.1)
-
stringi
1.8.7
@@ -1344,21 +1260,9 @@ packages and the latest build info.
CRAN (R 4.4.0)
-styler
-1.10.3
-2024-04-07
-CRAN (R 4.4.0)
-
-
-sys
-3.4.3
-2024-10-04
-CRAN (R 4.4.1)
-
-
systemfonts
-1.2.2
-2025-04-04
+1.2.3
+2025-04-30
CRAN (R 4.4.1)
@@ -1369,21 +1273,21 @@ packages and the latest build info.
textshaping
-1.0.0
-2025-01-20
+1.0.1
+2025-05-01
CRAN (R 4.4.1)
thematic
-0.1.6
-2024-07-29
-CRAN (R 4.4.0)
+0.1.7
+2025-06-19
+CRAN (R 4.4.1)
tibble
-3.2.1
-2023-03-20
-CRAN (R 4.4.0)
+3.3.0
+2025-06-08
+CRAN (R 4.4.1)
tidyr
@@ -1447,8 +1351,8 @@ packages and the latest build info.
V8
-6.0.3
-2025-03-26
+6.0.4
+2025-06-04
CRAN (R 4.4.1)
@@ -1507,8 +1411,8 @@ packages and the latest build info.
zip
-2.3.2
-2025-02-01
+2.3.3
+2025-05-13
CRAN (R 4.4.1)
diff --git a/articles/visuals.html b/articles/visuals.html
index 6672e840..adcb144d 100644
--- a/articles/visuals.html
+++ b/articles/visuals.html
@@ -73,7 +73,7 @@
diff --git a/authors.html b/authors.html
index a276b3e5..49b64f47 100644
--- a/authors.html
+++ b/authors.html
@@ -59,7 +59,7 @@
diff --git a/SESSION.html b/SESSION.html
index 7c34604e..d0b36fca 100644
--- a/SESSION.html
+++ b/SESSION.html
@@ -38,12 +38,12 @@
diff --git a/articles/FreesearchR.html b/articles/FreesearchR.html
index 2ac7aa7a..804ae5cc 100644
--- a/articles/FreesearchR.html
+++ b/articles/FreesearchR.html
@@ -73,7 +73,7 @@
@@ -82,47 +82,43 @@
@@ -92,9 +92,10 @@
| ——————————– R environment ——————————— | -
|---|
| |setting |value | |:———–|:——————————————| |version |R version 4.4.1 (2024-06-14) | |os |macOS 15.3.1 | |system |aarch64, darwin20 | |ui |RStudio | |language |(EN) | |collate |en_US.UTF-8 | |ctype |en_US.UTF-8 | |tz |Europe/Copenhagen | |date |2025-07-03 | |rstudio |2025.05.0+496 Mariposa Orchid (desktop) | |pandoc |3.6.4 @ /opt/homebrew/bin/ (via rmarkdown) | |quarto |1.7.30 @ /usr/local/bin/quarto | |FreesearchR |25.7.2.250703 | | +
| |setting |value | |:———–|:——————————————| |version |R version 4.4.1 (2024-06-14) | |os |macOS 15.3.1 | |system |aarch64, darwin20 | |ui |RStudio | |language |(EN) | |collate |en_US.UTF-8 | |ctype |en_US.UTF-8 | |tz |Europe/Copenhagen | |date |2025-07-22 | |rstudio |2025.05.0+496 Mariposa Orchid (desktop) | |pandoc |3.6.4 @ /opt/homebrew/bin/ (via rmarkdown) | |quarto |1.7.30 @ /usr/local/bin/quarto | |FreesearchR |25.7.2.250722 | |
———————————– packages ———————————–
| package | @@ -79,8 +79,8 @@2015-07-28 | CRAN (R 4.4.1) | ||||
|---|---|---|---|---|---|---|
| bayestestR | -0.15.3 | -2025-04-28 | +0.16.1 | +2025-07-01 | CRAN (R 4.4.1) | |
| bit | 4.6.0 | @@ -123,12 +123,12 @@2024-05-16 | CRAN (R 4.4.1) | |||
| cards | -0.6.0 | -2025-04-11 | +0.6.1 | +2025-07-03 | CRAN (R 4.4.1) | |
| cardx | -0.2.4 | -2025-04-12 | +0.2.5 | +2025-07-03 | CRAN (R 4.4.1) | |
| caTools | 1.18.3 | @@ -171,36 +171,28 @@2024-07-26 | CRAN (R 4.4.1) | |||
| commonmark | -1.9.5 | -2025-03-17 | +2.0.0 | +2025-07-07 | CRAN (R 4.4.1) | |
| crayon | 1.5.3 | 2024-06-20 | CRAN (R 4.4.1) | -|||
| credentials | -2.0.2 | -2024-10-04 | -CRAN (R 4.4.1) | -|||
| crosstalk | -1.2.1 | -2023-11-23 | -CRAN (R 4.4.0) | |||
| curl | -6.2.2 | -2025-03-24 | +6.4.0 | +2025-06-22 | CRAN (R 4.4.1) | |
| data.table | -1.17.0 | -2025-02-22 | +1.17.8 | +2025-07-10 | CRAN (R 4.4.1) | |
| datamods | 1.5.3 | 2024-10-02 | CRAN (R 4.4.1) | |||
| datawizard | -1.0.2 | -2025-03-24 | +1.2.0 | +2025-07-17 | CRAN (R 4.4.1) | |
| DEoptimR | 1.1-3-1 | @@ -243,100 +235,92 @@2024-09-16 | CRAN (R 4.4.1) | |||
| easystats | -0.7.4 | -2025-02-06 | +0.7.5 | +2025-07-11 | CRAN (R 4.4.1) | -|
| effectsize | -1.0.0 | -2024-12-10 | -CRAN (R 4.4.1) | -|||
| ellipsis | +||||||
| ellipsis | 0.3.2 | 2021-04-29 | CRAN (R 4.4.1) | -|||
| emmeans | -1.11.1 | -2025-05-04 | +||||
| emmeans | +1.11.2 | +2025-07-11 | CRAN (R 4.4.1) | -|||
| esquisse | +||||||
| esquisse | 2.1.0 | 2025-02-21 | CRAN (R 4.4.1) | -|||
| estimability | +||||||
| estimability | 1.5.1 | 2024-05-12 | CRAN (R 4.4.0) | -|||
| eulerr | +||||||
| eulerr | 7.0.2 | 2024-03-28 | CRAN (R 4.4.0) | -|||
| evaluate | -1.0.3 | -2025-01-10 | +||||
| evaluate | +1.0.4 | +2025-06-18 | CRAN (R 4.4.1) | -|||
| farver | +||||||
| farver | 2.1.2 | 2024-05-13 | CRAN (R 4.4.1) | -|||
| fastmap | +||||||
| fastmap | 1.2.0 | 2024-05-15 | CRAN (R 4.4.1) | -|||
| flextable | -0.9.7 | -2024-10-27 | +||||
| flextable | +0.9.9 | +2025-05-31 | CRAN (R 4.4.1) | -|||
| fontawesome | +||||||
| fontawesome | 0.5.3 | 2024-11-16 | CRAN (R 4.4.1) | -|||
| fontBitstreamVera | +||||||
| fontBitstreamVera | 0.1.1 | 2017-02-01 | CRAN (R 4.4.1) | -|||
| fontLiberation | +||||||
| fontLiberation | 0.1.0 | 2016-10-15 | CRAN (R 4.4.1) | -|||
| fontquiver | +||||||
| fontquiver | 0.2.1 | 2017-02-01 | CRAN (R 4.4.0) | -|||
| forcats | +||||||
| forcats | 1.0.0 | 2023-01-29 | CRAN (R 4.4.0) | -|||
| foreach | +||||||
| foreach | 1.5.2 | 2022-02-02 | CRAN (R 4.4.0) | -|||
| foreign | +||||||
| foreign | 0.8-90 | 2025-03-31 | CRAN (R 4.4.1) | -|||
| Formula | +||||||
| Formula | 1.2-5 | 2023-02-24 | CRAN (R 4.4.1) | -|||
| FreesearchR | +||||||
| FreesearchR | 25.7.2 | NA | NA | -|||
| fs | +||||||
| fs | 1.6.6 | 2025-04-12 | CRAN (R 4.4.1) | -|||
| gdtools | +||||||
| gdtools | 0.4.2 | 2025-03-27 | CRAN (R 4.4.1) | -|||
| generics | -0.1.3 | -2022-07-05 | -CRAN (R 4.4.1) | -|||
| gert | -2.1.5 | -2025-03-25 | +||||
| generics | +0.1.4 | +2025-05-09 | CRAN (R 4.4.1) | |||
| ggalluvial | 0.12.5 | @@ -347,9 +331,9 @@2023-09-05 | CRAN (R 4.4.0) | |||
| ggforce | -0.4.2 | -2024-02-19 | -CRAN (R 4.4.0) | +0.5.0 | +2025-06-18 | +CRAN (R 4.4.1) |
| ggplot2 | 3.5.2 | 2025-04-09 | @@ -359,16 +343,8 @@2024-01-23 | CRAN (R 4.4.0) | ||
| ggstats | -0.9.0 | -2025-03-10 | -CRAN (R 4.4.1) | -|||
| gh | -1.4.1 | -2024-03-28 | -CRAN (R 4.4.0) | -|||
| gitcreds | -0.1.2 | -2022-09-08 | +0.10.0 | +2025-07-02 | CRAN (R 4.4.1) | |
| glue | 1.8.0 | @@ -387,13 +363,13 @@2024-10-25 | CRAN (R 4.4.1) | |||
| gtsummary | -2.2.0 | -2025-04-14 | +2.3.0 | +2025-07-03 | CRAN (R 4.4.1) | |
| haven | -2.5.4 | -2023-11-30 | -CRAN (R 4.4.0) | +2.5.5 | +2025-05-30 | +CRAN (R 4.4.1) |
| here | 1.0.1 | 2020-12-13 | @@ -422,54 +398,46 @@1.6.16 | 2025-04-16 | CRAN (R 4.4.1) | -|
| httr2 | -1.1.2 | -2025-03-26 | -CRAN (R 4.4.1) | -|||
| IDEAFilter | +||||||
| IDEAFilter | 0.2.0 | 2024-04-15 | CRAN (R 4.4.0) | -|||
| insight | -1.2.0 | -2025-04-22 | +||||
| insight | +1.3.1 | +2025-06-30 | CRAN (R 4.4.1) | -|||
| iterators | +||||||
| iterators | 1.0.14 | 2022-02-05 | CRAN (R 4.4.1) | -|||
| jquerylib | +||||||
| jquerylib | 0.1.4 | 2021-04-26 | CRAN (R 4.4.0) | -|||
| jsonlite | +||||||
| jsonlite | 2.0.0 | 2025-03-27 | CRAN (R 4.4.1) | -|||
| jsonvalidate | +||||||
| jsonvalidate | 1.5.0 | 2025-02-07 | CRAN (R 4.4.1) | -|||
| KernSmooth | +||||||
| KernSmooth | 2.23-26 | 2025-01-01 | CRAN (R 4.4.1) | -|||
| keyring | -1.3.2 | -2023-12-11 | -CRAN (R 4.4.0) | -|||
| knitr | +||||||
| keyring | +1.4.1 | +2025-06-15 | +CRAN (R 4.4.1) | +|||
| knitr | 1.50 | 2025-03-16 | CRAN (R 4.4.1) | -|||
| labeling | +||||||
| labeling | 0.4.3 | 2023-08-29 | CRAN (R 4.4.1) | -|||
| labelled | -2.14.0 | -2025-01-08 | -CRAN (R 4.4.1) | |||
| later | 1.4.2 | 2025-04-08 | @@ -514,318 +482,294 @@2.0.1 | 2021-11-26 | CRAN (R 4.4.0) | -|
| mgcv | -1.9-3 | -2025-04-04 | -CRAN (R 4.4.1) | -|||
| mime | +||||||
| mime | 0.13 | 2025-03-17 | CRAN (R 4.4.1) | -|||
| miniUI | +||||||
| miniUI | 0.1.2 | 2025-04-17 | CRAN (R 4.4.1) | -|||
| minqa | +||||||
| minqa | 1.2.8 | 2024-08-17 | CRAN (R 4.4.1) | -|||
| mvtnorm | +||||||
| mvtnorm | 1.3-3 | 2025-01-10 | CRAN (R 4.4.1) | -|||
| nlme | +||||||
| nlme | 3.1-168 | 2025-03-31 | CRAN (R 4.4.1) | -|||
| nloptr | +||||||
| nloptr | 2.2.1 | 2025-03-17 | CRAN (R 4.4.1) | -|||
| nnet | +||||||
| nnet | 7.3-20 | 2025-01-01 | CRAN (R 4.4.1) | -|||
| officer | -0.6.8 | -2025-03-23 | +||||
| officer | +0.6.10 | +2025-05-30 | CRAN (R 4.4.1) | -|||
| opdisDownsampling | +||||||
| opdisDownsampling | 1.0.1 | 2024-04-15 | CRAN (R 4.4.0) | -|||
| openssl | -2.3.2 | -2025-02-03 | +||||
| openssl | +2.3.3 | +2025-05-26 | CRAN (R 4.4.1) | -|||
| openxlsx2 | -1.15 | -2025-04-25 | +||||
| openxlsx2 | +1.17 | +2025-07-04 | CRAN (R 4.4.1) | -|||
| pak | -0.8.0.2 | -2025-04-08 | +||||
| pak | +0.9.0 | +2025-05-27 | CRAN (R 4.4.1) | -|||
| parameters | -0.24.2 | -2025-03-04 | +||||
| parameters | +0.27.0 | +2025-07-09 | CRAN (R 4.4.1) | -|||
| patchwork | -1.3.0 | -2024-09-16 | +||||
| patchwork | +1.3.1 | +2025-06-21 | CRAN (R 4.4.1) | -|||
| pbmcapply | +||||||
| pbmcapply | 1.5.1 | 2022-04-28 | CRAN (R 4.4.1) | -|||
| performance | -0.13.0 | -2025-01-15 | +||||
| performance | +0.15.0 | +2025-07-10 | CRAN (R 4.4.1) | -|||
| phosphoricons | +||||||
| phosphoricons | 0.2.1 | 2024-04-08 | CRAN (R 4.4.0) | -|||
| pillar | -1.10.2 | -2025-04-05 | +||||
| pillar | +1.11.0 | +2025-07-04 | CRAN (R 4.4.1) | -|||
| pkgbuild | -1.4.7 | -2025-03-24 | +||||
| pkgbuild | +1.4.8 | +2025-05-26 | CRAN (R 4.4.1) | -|||
| pkgconfig | +||||||
| pkgconfig | 2.0.3 | 2019-09-22 | CRAN (R 4.4.1) | -|||
| pkgload | +||||||
| pkgload | 1.4.0 | 2024-06-28 | CRAN (R 4.4.0) | -|||
| plyr | +||||||
| plyr | 1.8.9 | 2023-10-02 | CRAN (R 4.4.1) | -|||
| polyclip | +||||||
| polyclip | 1.10-7 | 2024-07-23 | CRAN (R 4.4.1) | -|||
| pracma | +||||||
| pracma | 2.4.4 | 2023-11-10 | CRAN (R 4.4.1) | -|||
| processx | +||||||
| processx | 3.8.6 | 2025-02-21 | CRAN (R 4.4.1) | -|||
| profvis | +||||||
| profvis | 0.4.0 | 2024-09-20 | CRAN (R 4.4.1) | -|||
| promises | -1.3.2 | -2024-11-28 | +||||
| promises | +1.3.3 | +2025-05-29 | CRAN (R 4.4.1) | -|||
| proxy | +||||||
| proxy | 0.4-27 | 2022-06-09 | CRAN (R 4.4.1) | -|||
| ps | +||||||
| ps | 1.9.1 | 2025-04-12 | CRAN (R 4.4.1) | -|||
| purrr | -1.0.4 | -2025-02-05 | +||||
| purrr | +1.1.0 | +2025-07-10 | CRAN (R 4.4.1) | -|||
| qqconf | +||||||
| qqconf | 1.3.2 | 2023-04-14 | CRAN (R 4.4.0) | -|||
| qqplotr | +||||||
| qqplotr | 0.0.6 | 2023-01-25 | CRAN (R 4.4.0) | -|||
| quarto | +||||||
| quarto | 1.4.4 | 2024-07-20 | CRAN (R 4.4.0) | -|||
| R.cache | -0.16.0 | -2022-07-21 | -CRAN (R 4.4.0) | -|||
| R.methodsS3 | -1.8.2 | -2022-06-13 | -CRAN (R 4.4.1) | -|||
| R.oo | -1.27.0 | -2024-11-01 | -CRAN (R 4.4.1) | -|||
| R.utils | -2.13.0 | -2025-02-24 | -CRAN (R 4.4.1) | -|||
| R6 | +||||||
| R6 | 2.6.1 | 2025-02-15 | CRAN (R 4.4.1) | -|||
| ragg | +||||||
| ragg | 1.4.0 | 2025-04-10 | CRAN (R 4.4.1) | -|||
| rankinPlot | +||||||
| rankinPlot | 1.1.0 | 2023-01-30 | CRAN (R 4.4.0) | -|||
| rappdirs | +||||||
| rappdirs | 0.3.3 | 2021-01-31 | CRAN (R 4.4.1) | -|||
| rbibutils | +||||||
| rbibutils | 2.3 | 2024-10-04 | CRAN (R 4.4.1) | -|||
| RColorBrewer | +||||||
| RColorBrewer | 1.1-3 | 2022-04-03 | CRAN (R 4.4.1) | -|||
| Rcpp | -1.0.14 | -2025-01-12 | +||||
| Rcpp | +1.1.0 | +2025-07-02 | CRAN (R 4.4.1) | -|||
| RcppArmadillo | -14.4.2-1 | -2025-04-25 | +||||
| RcppArmadillo | +14.6.0-1 | +2025-07-02 | CRAN (R 4.4.1) | -|||
| Rdpack | +||||||
| Rdpack | 2.6.4 | 2025-04-09 | CRAN (R 4.4.1) | -|||
| reactable | +||||||
| reactable | 0.4.4 | 2023-03-12 | CRAN (R 4.4.0) | -|||
| readODS | +||||||
| readODS | 2.3.2 | 2025-01-13 | CRAN (R 4.4.1) | -|||
| readr | +||||||
| readr | 2.1.5 | 2024-01-10 | CRAN (R 4.4.0) | -|||
| readxl | +||||||
| readxl | 1.4.5 | 2025-03-07 | CRAN (R 4.4.1) | -|||
| REDCapCAST | +||||||
| REDCapCAST | 25.3.2 | 2025-03-10 | CRAN (R 4.4.1) | -|||
| REDCapR | +||||||
| REDCapR | 1.4.0 | 2025-01-11 | CRAN (R 4.4.1) | -|||
| reformulas | -0.4.0 | -2024-11-03 | +||||
| reformulas | +0.4.1 | +2025-04-30 | CRAN (R 4.4.1) | -|||
| remotes | +||||||
| remotes | 2.5.0 | 2024-03-17 | CRAN (R 4.4.1) | -|||
| rempsyc | +||||||
| rempsyc | 0.1.9 | 2025-02-01 | CRAN (R 4.4.1) | -|||
| renv | +||||||
| renv | 1.1.4 | 2025-03-20 | CRAN (R 4.4.1) | -|||
| reshape2 | +||||||
| reshape2 | 1.4.4 | 2020-04-09 | CRAN (R 4.4.0) | -|||
| rio | +||||||
| rio | 1.2.3 | 2024-09-25 | CRAN (R 4.4.1) | -|||
| rlang | +||||||
| rlang | 1.1.6 | 2025-04-11 | CRAN (R 4.4.1) | -|||
| rmarkdown | +||||||
| rmarkdown | 2.29 | 2024-11-04 | CRAN (R 4.4.1) | -|||
| robustbase | +||||||
| robustbase | 0.99-4-1 | 2024-09-27 | CRAN (R 4.4.1) | -|||
| roxygen2 | +||||||
| roxygen2 | 7.3.2 | 2024-06-28 | CRAN (R 4.4.0) | -|||
| rpart | +||||||
| rpart | 4.1.24 | 2025-01-07 | CRAN (R 4.4.1) | -|||
| rprojroot | -2.0.4 | -2023-11-05 | +||||
| rprojroot | +2.1.0 | +2025-07-12 | CRAN (R 4.4.1) | -|||
| rsconnect | -1.3.4 | -2025-01-22 | +||||
| rsconnect | +1.5.0 | +2025-06-26 | CRAN (R 4.4.1) | -|||
| rstudioapi | +||||||
| rstudioapi | 0.17.1 | 2024-10-22 | CRAN (R 4.4.1) | -|||
| sass | +||||||
| sass | 0.4.10 | 2025-04-11 | CRAN (R 4.4.1) | -|||
| scales | +||||||
| scales | 1.4.0 | 2025-04-24 | CRAN (R 4.4.1) | -|||
| see | +||||||
| see | 0.11.0 | 2025-03-11 | CRAN (R 4.4.1) | -|||
| sessioninfo | +||||||
| sessioninfo | 1.2.3 | 2025-02-05 | CRAN (R 4.4.1) | -|||
| shiny | -1.10.0 | -2024-12-14 | +||||
| shiny | +1.11.1 | +2025-07-03 | CRAN (R 4.4.1) | -|||
| shiny2docker | -0.0.2 | -2025-02-09 | +||||
| shiny2docker | +0.0.3 | +2025-06-28 | CRAN (R 4.4.1) | -|||
| shinybusy | +||||||
| shinybusy | 0.3.3 | 2024-03-09 | CRAN (R 4.4.0) | -|||
| shinyjs | +||||||
| shinyjs | 2.1.0 | 2021-12-23 | CRAN (R 4.4.0) | -|||
| shinyTime | +||||||
| shinyTime | 1.0.3 | 2022-08-19 | CRAN (R 4.4.0) | -|||
| shinyWidgets | +||||||
| shinyWidgets | 0.9.0 | 2025-02-21 | CRAN (R 4.4.1) | -|||
| sourcetools | -0.1.7-1 | -2023-02-01 | -CRAN (R 4.4.1) | |||
| stringi | 1.8.7 | 2025-03-27 | @@ -834,34 +778,26 @@1.5.1 | 2023-11-14 | CRAN (R 4.4.0) | -|
| styler | -1.10.3 | -2024-04-07 | -CRAN (R 4.4.0) | -|||
| sys | -3.4.3 | -2024-10-04 | -CRAN (R 4.4.1) | |||
| systemfonts | -1.2.2 | -2025-04-04 | +1.2.3 | +2025-04-30 | CRAN (R 4.4.1) | |
| testthat | 3.2.3 | 2025-01-13 | CRAN (R 4.4.1) | |||
| textshaping | -1.0.0 | -2025-01-20 | +1.0.1 | +2025-05-01 | CRAN (R 4.4.1) | |
| thematic | -0.1.6 | -2024-07-29 | -CRAN (R 4.4.0) | +0.1.7 | +2025-06-19 | +CRAN (R 4.4.1) |
| tibble | -3.2.1 | -2023-03-20 | -CRAN (R 4.4.0) | +3.3.0 | +2025-06-08 | +CRAN (R 4.4.1) |
| tidyr | 1.3.1 | 2024-01-24 | @@ -903,8 +839,8 @@2024-07-29 | CRAN (R 4.4.1) | ||
| V8 | -6.0.3 | -2025-03-26 | +6.0.4 | +2025-06-04 | CRAN (R 4.4.1) | |
| vctrs | 0.6.5 | @@ -943,8 +879,8 @@2024-07-26 | CRAN (R 4.4.1) | |||
| zip | -2.3.2 | -2025-02-01 | +2.3.3 | +2025-05-13 | CRAN (R 4.4.1) |
FreesearchR
- Source:vignettes/FreesearchR.Rmd
+ Source: vignettes/FreesearchR.Rmd
FreesearchR.RmdGetting started with FreesearchR
-Below is a simple walk-trough and basic instructions for the -functions on the FreesearchR app.
+Below is a simple walk-trough and basic descriptions on the different +features of the FreesearchR app.
Launching
-The easiest way to get started is to launch the hosted version of -the app on shinyapps.io (click this link).
-Additionally you have the option to run the app locally with access -to any data in your current working environment.
-To do this, open R (or RStudio or similar), and run the -following code to install the latest version of -FreesearchR and launch the app:
+The easiest way to get started is to launch the onlie version of the app (click +this link). Please be aware not to upload sensitive data in this +version as data security can not be guaranteed in this online +environment. The app can easily be run from R on your own +computer by running the code below (read +more on running locally here):
require("pak")
pak::pak("agdamsbo/FreesearchR")
library(FreesearchR)
FreesearchR::launch_FreesearchR()As a small note, a standalone Windows app version is on the drawing -board as well, but no time frame is available.
+board as well, but no time frame is currently available.
-Importing data
+
diff --git a/articles/missingness.html b/articles/missingness.html
index ad4a5214..95a860ae 100644
--- a/articles/missingness.html
+++ b/articles/missingness.html
@@ -73,7 +73,7 @@
Importing data
+Get started
-
Once in the app and in the “Import”, you have three +
Once in the app, get started by loading your data. You have three options available for importing data: file upload, REDCap server export and local or sample data.
-After choosing a data source, you can set a threshold to filter data -be completenes and further manually specify variables to include for -analyses.
+After choosing a data source nad importing data, you can preview the +basic data structure and missing observations, set a threshold to filter +data by completeness and further manually specify variables to include +for analyses.
File upload
-Currently several data file formats are supported for easy import -(csv, txt, xls(x), ods, rds, dta). If importing workbooks (xls(x) or -ods), you are prompted to specify sheet(s) to import. If choosing -multiple sheets, these are automatically merged by common variable(s), -so please make sure that key variables are correctly named -identically.
-A notification is posted with error or success. After succesfull -import data can be previewed directly by clicking “click to see data” in -the notification.
+Several data file formats are supported for easy import (csv, txt, +xls(x), ods, rds, dta). If importing workbooks (xls(x) or ods), you are +prompted to specify sheet(s) to import. If choosing multiple sheets, +these are automatically merged by common variable(s), so please make +sure that key/ID variables are correctly named identically.
REDCap server export @@ -134,7 +130,7 @@ rights to do so.
Please don’t store the API-key on your device unless encrypted or in a keyring, as this may compromise data safety. Log in to your REDCap server and retrieve the token when needed.
-Type the correct webaddress of your REDCap server.
+Type the correct web address of your REDCap server.
The module will validate the information and you can click “Connect”.
This will unfold options to preview your data dictionary (the main @@ -144,19 +140,19 @@ filtering options.
Local or sample data
-When opening the online hosted app, this is mainly for testing -purposes. When running the app locally from R on your own -computer, you will find all data.frames in the current environment here. -This extends the possible uses of this app to allow for quick and easy -data insights and code generation for basic plotting to fine tune.
+When opening the online hosted app, you can load some sample data to +try out the app. When running the app locally from R on your +own computer, you will find all data frames loaded in your environment +here. This extends the possible uses of this app to allow for quick and +easy data insights and code generation.
-Data
+
@@ -364,7 +363,7 @@ Choose which model(s) to include.
model results. Choose between MS Word or LibreOffice format.
diff --git a/articles/data-types.html b/articles/data-types.html
index 84532a49..a908d1cd 100644
--- a/articles/data-types.html
+++ b/articles/data-types.html
@@ -73,7 +73,7 @@
Data
+Prepare
-
This is the panel to get a good overview of your data, check data is -classed and formatted correctly, perform simple modifications and filter -data.
+This is the panel to prepare data for evaluation and analyses and get +a good overview of your data, check data is classed and formatted +correctly, perform simple modifications and filter data.
Summary
@@ -341,6 +337,9 @@ analyses you should probably just write the code yourself.Generate simple regression models and get the results in a nice table. This will also be included in the exported report.
+This will generate a combined table with both univariate regression +model results for each included variable and a multivariate model with +all variables included for explorative analyses.
Data types
- Source:vignettes/data-types.Rmd
+ Source: vignettes/data-types.Rmd
data-types.RmdMissingness in data
- Source:vignettes/missingness.Rmd
+ Source: vignettes/missingness.Rmd
missingness.RmdFurther reading
-The authors behind the {finalfit}-package have shared -a very comprehensive article on what to do and think about missing -observations in your data. Please have a look here.
+The authors behind the {finalfit}-package have +shared a very comprehensive article on what to do and think about +missing observations in your data. Please have a look +here.
On visuals
- Source:vignettes/visuals.Rmd
+ Source: vignettes/visuals.Rmd
visuals.RmdCitation
-Source: DESCRIPTION
Source: DESCRIPTION
Damsbo A (2025). FreesearchR: A free and open-source browser based data analysis tool for researchers with publication ready output. diff --git a/news/index.html b/news/index.html index bb96c198..84147a80 100644 --- a/news/index.html +++ b/news/index.html @@ -38,14 +38,19 @@
-
+ FreesearchR 25.7.2 - DEV
+FreesearchR 25.7.3 - DEV
+- +NEW preparing to automatically only show relevant tabs to simplify interface. NOT IMPLEMENTED YET +
+
FreesearchR 25.7.2
FIX refining hiding drop downs. All JavaScript is now in separate file. Coded with GAI help from claude.ai.
FIX refined iconography and navigation
-NEW preparing to automatically only show relevant tabs to simplify interface. NOT IMPLEMENTED YET
+FIX updated intro and docs.
FreesearchR 25.7.1
diff --git a/pkgdown.yml b/pkgdown.yml index dbb9d581..7ab13a84 100644 --- a/pkgdown.yml +++ b/pkgdown.yml @@ -7,7 +7,7 @@ articles: missingness: missingness.html session: session.html visuals: visuals.html -last_built: 2025-07-04T08:28Z +last_built: 2025-07-22T18:37Z urls: reference: https://agdamsbo.github.io/FreesearchR/reference article: https://agdamsbo.github.io/FreesearchR/articles diff --git a/reference/FreesearchR_palette.html b/reference/FreesearchR_palette.html index 350e359c..96b9569b 100644 --- a/reference/FreesearchR_palette.html +++ b/reference/FreesearchR_palette.html @@ -38,7 +38,7 @@Convert class grid column to icon
- Source:R/data-summary.R
+ Source: R/data-summary.R
add_class_icon.RdConvert string of arguments to list of arguments
- Source:R/helpers.R
+ Source: R/helpers.R
argsstring2list.RdPrint a flexible baseline characteristics table
- Source:R/baseline_table.R
+ Source: R/baseline_table.R
baseline_table.RdExtract and clean axis ranges
- Source:R/data_plots.R
+ Source: R/data_plots.R
clean_common_axis.RdAttempts at applying uniform date format
- Source:R/update-variables-ext.R
+ Source: R/update-variables-ext.R
clean_date.Rdgsub wrapper for piping with default values for separator substituting
- Source:R/update-variables-ext.R
+ Source: R/update-variables-ext.R
clean_sep.RdA selectizeInput customized for data frames with column labels
- Source:R/custom_SelectInput.R
+ Source: R/custom_SelectInput.R
columnSelectInput.RdPairwise comparison of missings across covariables
- Source:R/missings-module.R
+ Source: R/missings-module.R
compare_missings.RdCreate a baseline table
- Source:R/baseline_table.R
+ Source: R/baseline_table.R
create_baseline.RdCreate summetric log ticks
- Source:R/regression_plot.R
+ Source: R/regression_plot.R
create_log_tics.RdCreate a data overview datagrid
- Source:R/data-summary.R
+ Source: R/data-summary.R
create_overview_datagrid.RdModule to Convert Numeric to Factor
- Source:R/cut-variable-dates.R
+ Source: R/cut-variable-dates.R
cut-variable.RdExtended cutting function with fall-back to the native base::cut
- Source:R/cut-variable-dates.R
+ Source: R/cut-variable-dates.R
cut_var.RdData correlations evaluation module
- Source:R/correlations-module.R
+ Source: R/correlations-module.R
data-correlations.RdTest app for the data-import module
- Source:R/data-import.R
+ Source: R/data-import.R
data-import.RdData correlations evaluation module
- Source:R/missings-module.R, R/visual_summary.R
+ Source: R/missings-module.R, R/visual_summary.R
data-missings.RdData correlations evaluation module
- Source:R/data_plots.R, R/plot_box.R, R/plot_hbar.R, and 4 more
+ Source: R/data_plots.R, R/plot_box.R, R/plot_hbar.R, and 4 more
data-plots.RdData summary for printing visual summary
- Source:R/visual_summary.R
+ Source: R/visual_summary.R
data_summary_gather.RdFilter function to filter data set by variable type
- Source:R/helpers.R
+ Source: R/helpers.R
data_type_filter.RdRecognised data types from data_type
- Source:R/regression_model.R
+ Source: R/regression_model.R
data_types.RdDrop empty events from REDCap export
- Source:R/redcap_read_shiny_module.R
+ Source: R/redcap_read_shiny_module.R
drop_empty_event.RdDeparses expression as string, substitutes native pipe and adds assign
- Source:R/helpers.R
+ Source: R/helpers.R
expression_string.RdMerges list of named arguments for qmd header generation
- Source:R/report.R
+ Source: R/report.R
format_writer.RdGet the function options based on the selected function description
- Source:R/regression_model.R
+ Source: R/regression_model.R
get_fun_options.RdPrint label, and if missing print variable name
- Source:R/data_plots.R
+ Source: R/data_plots.R
get_label.RdGet the function options based on the selected function description
- Source:R/data_plots.R
+ Source: R/data_plots.R
get_plot_options.RdEasily get variable icon based on data type or class
- Source:R/data-summary.R
+ Source: R/data-summary.R
get_var_icon.RdWrapper function to get function from character vector referring to function from namespace. Passed to 'do.call()'
- Source:R/helpers.R
+ Source: R/helpers.R
getfun.RdGGplot default theme for plotting export objects
- Source:R/theme.R
+ Source: R/theme.R
gg_theme_export.RdGGplot default theme for plotting in Shiny
- Source:R/theme.R
+ Source: R/theme.R
gg_theme_shiny.RdMatches pattern to vector based on match type
- Source:R/wide2long.R
+ Source: R/wide2long.R
grepl_fix.RdWrapper to ease data file import
- Source:R/import-file-ext.R
+ Source: R/import-file-ext.R
import-file-type.RdTest app for the import_file module
- Source:R/import-file-ext.R
+ Source: R/import-file-ext.R
import-file_module.RdSplit vector by an index and embed addition
- Source:R/report.R
+ Source: R/report.R
index_embed.RdChecks if elements in vector are equally spaced as indication of ID
- Source:R/data-summary.R
+ Source: R/data-summary.R
is_consecutive.RdTest is date/datetime/time
- Source:R/cut-variable-dates.R
+ Source: R/cut-variable-dates.R
is_datetime.RdTest if element is identical to the previous
- Source:R/helpers.R
+ Source: R/helpers.R
is_identical_to_previous.RdTest if url is valid format for REDCap API
- Source:R/redcap_read_shiny_module.R
+ Source: R/redcap_read_shiny_module.R
is_valid_redcap_url.RdValidate REDCap token
- Source:R/redcap_read_shiny_module.R
+ Source: R/redcap_read_shiny_module.R
is_valid_token.RdEasily launch the FreesearchR app
- Source:R/launch_FreesearchR.R
+ Source: R/launch_FreesearchR.R
launch_FreesearchR.RdEasily round log scale limits for nice plots
- Source:R/regression_plot.R
+ Source: R/regression_plot.R
limit_log.RdLine breaking at given number of characters for nicely plotting labels
- Source:R/data_plots.R
+ Source: R/data_plots.R
line_break.RdWrapper to pivot gtsummary table data to long for plotting
- Source:R/regression_plot.R
+ Source: R/regression_plot.R
merge_long.RdPlot missings and class with apexcharter
- Source:R/visual_summary.R
+ Source: R/visual_summary.R
missings_apex_plot.RdWrapper to modify quarto file to render specific formats
- Source:R/report.R
+ Source: R/report.R
modify_qmd.RdCreate a data overview data.frame ready for sparklines
- Source:R/data-summary.R
+ Source: R/data-summary.R
overview_vars.RdReduce character vector with the native pipe operator or character string
- Source:R/helpers.R
+ Source: R/helpers.R
pipe_string.RdRegression coef plot from gtsummary. Slightly modified to pass on arguments
- Source:R/regression_plot.R
+ Source: R/regression_plot.R
plot.tbl_regression.RdEasily plot single euler diagrams
- Source:R/plot_euler.R
+ Source: R/plot_euler.R
plot_euler_single.RdGet possible regression models
- Source:R/regression_model.R
+ Source: R/regression_model.R
possible_functions.RdShiny module to browser and export REDCap data
- Source:R/redcap_read_shiny_module.R
+ Source: R/redcap_read_shiny_module.R
redcap_read_shiny_module.RdCreate a regression model programatically
- Source:R/regression_model.R
+ Source: R/regression_model.R
regression_model.RdCreate table of regression model
- Source:R/regression_table.R
+ Source: R/regression_table.R
regression_table.RdCreate regression summary table
- Source:R/regression_table.R
+ Source: R/regression_table.R
regression_table_create.RdRemoves columns with completenes below cutoff
- Source:R/helpers.R
+ Source: R/helpers.R
remove_empty_cols.RdVery simple function to remove nested lists, like when uploading .rds
- Source:R/helpers.R
+ Source: R/helpers.R
remove_nested_list.RdGet names of repeated instruments
- Source:R/redcap_read_shiny_module.R
+ Source: R/redcap_read_shiny_module.R
repeated_instruments.RdCreate a select input control with icon(s)
- Source:R/import-file-ext.R
+ Source: R/import-file-ext.R
selectInputIcon.RdDisplay a table in a window
- Source:R/datagrid-infos-mod.R
+ Source: R/datagrid-infos-mod.R
show_data.RdSimplified version of the snakecase packages to_snake_case
- Source:R/helpers.R
+ Source: R/helpers.R
simple_snake.RdDrop-in replacement for the base::sort_by with option to remove NAs
- Source:R/helpers.R
+ Source: R/helpers.R
sort_by.RdSpecify format arguments to include in qmd header/frontmatter
- Source:R/report.R
+ Source: R/report.R
specify_qmd_format.RdEasily subset by data type function
- Source:R/data_plots.R
+ Source: R/data_plots.R
subset_types.RdImplemented functions
- Source:R/regression_model.R
+ Source: R/regression_model.R
supported_functions.RdEnsure symmetrical plot around 1 on a logarithmic x scale for ratio plots
- Source:R/regression_plot.R
+ Source: R/regression_plot.R
symmetrical_scale_x_log10.RdA substitue to gtsummary::tbl_merge, that will use list names for the tab spanner names.
- Source:R/regression_table.R
+ Source: R/regression_table.R
tbl_merge.RdCreate unique short names of character vector items based on index
- Source:R/visual_summary.R
+ Source: R/visual_summary.R
unique_short.RdModule to Reorder the Levels of a Factor Variable
- Source:R/update-factor-ext.R
+ Source: R/update-factor-ext.R
update-factor.RdSelect, rename and convert variables
- Source:R/update-variables-ext.R
+ Source: R/update-variables-ext.R
update-variables.RdModified from the datamods pacakge
- Source:R/update-variables-ext.R
+ Source: R/update-variables-ext.R
update_variables_datagrid.RdA selectizeInput customized for named vectors
- Source:R/custom_SelectInput.R
+ Source: R/custom_SelectInput.R
vectorSelectInput.RdVertical stacked bar plot wrapper
- Source:R/plot_hbar.R
+ Source: R/plot_hbar.R
vertical_stacked_bars.RdGgplot2 data summary visualisation based on visdat::vis_dat.
- Source:R/visual_summary.R
+ Source: R/visual_summary.R
visual_summary.RdAlternative pivoting method for easily pivoting based on name pattern
- Source:R/wide2long.R
+ Source: R/wide2long.R
wide2long.RdWrapper to save data in RDS, load into specified qmd and render
- Source:R/helpers.R
+ Source: R/helpers.R
write_quarto.Rd<\\/div>\\n