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https://github.com/agdamsbo/FreesearchR.git
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9 changed files with 1353 additions and 72 deletions
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@ -11,5 +11,5 @@
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^_pkgdown\.yml$
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^docs$
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^pkgdown$
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^dev$
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^data-raw$
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^CITATION\.cff$
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CITATION.cff
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18
DESCRIPTION
18
DESCRIPTION
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@ -1,10 +1,13 @@
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Package: FreesearchR
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Title: Clinical Health Data Analysis
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Version: 25.4.3
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Authors@R:
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person("Andreas Gammelgaard", "Damsbo", , "agdamsbo@clin.au.dk", role = c("aut", "cre"),
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comment = c(ORCID = "0000-0002-7559-1154"))
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Description: Free and open source browser based clinical health data exploration and analysis with publication ready output.
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Title: A free and open-source browser based data analysis tool for researchers with publication ready output
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Version: 25.4.4
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Authors@R: c(
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person("Andreas Gammelgaard", "Damsbo",email="agdamsbo@clin.au.dk", role = c("aut", "cre"),
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comment = c(ORCID = "0000-0002-7559-1154")),
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person("Jutta Mari Adelin", "Jørgensen", role="ctb"),
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person("Anne Brink", "Behrndtz", role="ctb")
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)
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Description: Easily evaluate and analysis clinical health data in your browser on a server or on your own device. Import data from multiple sources, summarise, modify and visualise data and export key metrics and regression analysis results in a publication ready format.
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License: AGPL (>= 3)
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Encoding: UTF-8
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Roxygen: list(markdown = TRUE)
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@ -73,7 +76,8 @@ Suggests:
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rmarkdown,
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testthat (>= 3.0.0),
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shinytest,
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covr
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covr,
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cffr
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URL: https://github.com/agdamsbo/FreesearchR, https://agdamsbo.github.io/FreesearchR/
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BugReports: https://github.com/agdamsbo/FreesearchR/issues
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VignetteBuilder: knitr
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4
NEWS.md
4
NEWS.md
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@ -1,3 +1,7 @@
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# FreesearchR 25.4.4
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Minor updates in docs and easier citation.
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# FreesearchR 25.4.3
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- *NEW*: Added a variables type filter to easily exclude unwanted types. This also includes having data type rather than data class in the summary table. Will evaluate. Types are a simpler, more practical version of the *R* data class to easy interpretation.
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@ -1 +1 @@
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app_version <- function()'v25.4.3.250428'
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app_version <- function()'v25.4.4.250428'
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R/sysdata.rda
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SESSION.md
150
SESSION.md
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@ -15,69 +15,97 @@
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|rstudio |2024.12.1+563 Kousa Dogwood (desktop) |
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|pandoc |3.6.4 @ /opt/homebrew/bin/pandoc |
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|quarto |1.6.40 @ /usr/local/bin/quarto |
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|FreesearchR |25.4.3.250428 |
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|FreesearchR |25.4.4.250428 |
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--------------------------------------------------------------------------------
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----------------------------------- packages -----------------------------------
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--------------------------------------------------------------------------------
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|package |loadedversion |date |source |
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|:-----------|:-------------|:----------|:--------------|
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|bit |4.6.0 |2025-03-06 |CRAN (R 4.4.1) |
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|bit64 |4.6.0-1 |2025-01-16 |CRAN (R 4.4.1) |
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|cachem |1.1.0 |2024-05-16 |CRAN (R 4.4.1) |
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|cli |3.6.5 |2025-04-23 |CRAN (R 4.4.1) |
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|colorspace |2.1-1 |2024-07-26 |CRAN (R 4.4.1) |
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|crayon |1.5.3 |2024-06-20 |CRAN (R 4.4.1) |
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|desc |1.4.3 |2023-12-10 |CRAN (R 4.4.1) |
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|devtools |2.4.5 |2022-10-11 |CRAN (R 4.4.0) |
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|digest |0.6.37 |2024-08-19 |CRAN (R 4.4.1) |
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|dplyr |1.1.4 |2023-11-17 |CRAN (R 4.4.0) |
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|ellipsis |0.3.2 |2021-04-29 |CRAN (R 4.4.1) |
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|fastmap |1.2.0 |2024-05-15 |CRAN (R 4.4.1) |
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|fs |1.6.6 |2025-04-12 |CRAN (R 4.4.1) |
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|generics |0.1.3 |2022-07-05 |CRAN (R 4.4.1) |
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|ggplot2 |3.5.2 |2025-04-09 |CRAN (R 4.4.1) |
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|ggstats |0.9.0 |2025-03-10 |CRAN (R 4.4.1) |
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|glue |1.8.0 |2024-09-30 |CRAN (R 4.4.1) |
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|gtable |0.3.6 |2024-10-25 |CRAN (R 4.4.1) |
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|here |1.0.1 |2020-12-13 |CRAN (R 4.4.1) |
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|hms |1.1.3 |2023-03-21 |CRAN (R 4.4.0) |
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|htmltools |0.5.8.1 |2024-04-04 |CRAN (R 4.4.1) |
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|htmlwidgets |1.6.4 |2023-12-06 |CRAN (R 4.4.0) |
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|httpuv |1.6.16 |2025-04-16 |CRAN (R 4.4.1) |
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|later |1.4.2 |2025-04-08 |CRAN (R 4.4.1) |
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|lifecycle |1.0.4 |2023-11-07 |CRAN (R 4.4.1) |
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|magrittr |2.0.3 |2022-03-30 |CRAN (R 4.4.1) |
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|memoise |2.0.1 |2021-11-26 |CRAN (R 4.4.0) |
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|mime |0.13 |2025-03-17 |CRAN (R 4.4.1) |
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|miniUI |0.1.2 |2025-04-17 |CRAN (R 4.4.1) |
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|munsell |0.5.1 |2024-04-01 |CRAN (R 4.4.1) |
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|pillar |1.10.2 |2025-04-05 |CRAN (R 4.4.1) |
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|pkgbuild |1.4.7 |2025-03-24 |CRAN (R 4.4.1) |
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|pkgconfig |2.0.3 |2019-09-22 |CRAN (R 4.4.1) |
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|pkgload |1.4.0 |2024-06-28 |CRAN (R 4.4.0) |
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|profvis |0.4.0 |2024-09-20 |CRAN (R 4.4.1) |
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|promises |1.3.2 |2024-11-28 |CRAN (R 4.4.1) |
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|purrr |1.0.4 |2025-02-05 |CRAN (R 4.4.1) |
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|R6 |2.6.1 |2025-02-15 |CRAN (R 4.4.1) |
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|Rcpp |1.0.14 |2025-01-12 |CRAN (R 4.4.1) |
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|readr |2.1.5 |2024-01-10 |CRAN (R 4.4.0) |
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|remotes |2.5.0 |2024-03-17 |CRAN (R 4.4.1) |
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|renv |1.1.4 |2025-03-20 |CRAN (R 4.4.1) |
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|rlang |1.1.6 |2025-04-11 |CRAN (R 4.4.1) |
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|rprojroot |2.0.4 |2023-11-05 |CRAN (R 4.4.1) |
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|rsconnect |1.3.4 |2025-01-22 |CRAN (R 4.4.1) |
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|rstudioapi |0.17.1 |2024-10-22 |CRAN (R 4.4.1) |
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|scales |1.3.0 |2023-11-28 |CRAN (R 4.4.0) |
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|sessioninfo |1.2.3 |2025-02-05 |CRAN (R 4.4.1) |
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|shiny |1.10.0 |2024-12-14 |CRAN (R 4.4.1) |
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|tibble |3.2.1 |2023-03-20 |CRAN (R 4.4.0) |
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|tidyselect |1.2.1 |2024-03-11 |CRAN (R 4.4.0) |
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|tzdb |0.5.0 |2025-03-15 |CRAN (R 4.4.1) |
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|urlchecker |1.0.1 |2021-11-30 |CRAN (R 4.4.1) |
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|usethis |3.1.0 |2024-11-26 |CRAN (R 4.4.1) |
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|vctrs |0.6.5 |2023-12-01 |CRAN (R 4.4.0) |
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|vroom |1.6.5 |2023-12-05 |CRAN (R 4.4.0) |
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|withr |3.0.2 |2024-10-28 |CRAN (R 4.4.1) |
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|xtable |1.8-4 |2019-04-21 |CRAN (R 4.4.1) |
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|package |loadedversion |date |source |
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|:-------------|:-------------|:----------|:--------------|
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|askpass |1.2.1 |2024-10-04 |CRAN (R 4.4.1) |
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|assertthat |0.2.1 |2019-03-21 |CRAN (R 4.4.1) |
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|bit |4.6.0 |2025-03-06 |CRAN (R 4.4.1) |
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|bit64 |4.6.0-1 |2025-01-16 |CRAN (R 4.4.1) |
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|bslib |0.9.0 |2025-01-30 |CRAN (R 4.4.1) |
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|cachem |1.1.0 |2024-05-16 |CRAN (R 4.4.1) |
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|cffr |1.2.0 |2025-01-25 |CRAN (R 4.4.1) |
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|class |7.3-23 |2025-01-01 |CRAN (R 4.4.1) |
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|classInt |0.4-11 |2025-01-08 |CRAN (R 4.4.1) |
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|cli |3.6.5 |2025-04-23 |CRAN (R 4.4.1) |
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|crayon |1.5.3 |2024-06-20 |CRAN (R 4.4.1) |
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|credentials |2.0.2 |2024-10-04 |CRAN (R 4.4.1) |
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|curl |6.2.2 |2025-03-24 |CRAN (R 4.4.1) |
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|data.table |1.17.0 |2025-02-22 |CRAN (R 4.4.1) |
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|desc |1.4.3 |2023-12-10 |CRAN (R 4.4.1) |
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|devtools |2.4.5 |2022-10-11 |CRAN (R 4.4.0) |
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|digest |0.6.37 |2024-08-19 |CRAN (R 4.4.1) |
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|dplyr |1.1.4 |2023-11-17 |CRAN (R 4.4.0) |
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|e1071 |1.7-16 |2024-09-16 |CRAN (R 4.4.1) |
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|ellipsis |0.3.2 |2021-04-29 |CRAN (R 4.4.1) |
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|evaluate |1.0.3 |2025-01-10 |CRAN (R 4.4.1) |
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|fastmap |1.2.0 |2024-05-15 |CRAN (R 4.4.1) |
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|FreesearchR |25.4.4 |NA |NA |
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|fs |1.6.6 |2025-04-12 |CRAN (R 4.4.1) |
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|generics |0.1.3 |2022-07-05 |CRAN (R 4.4.1) |
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|gert |2.1.5 |2025-03-25 |CRAN (R 4.4.1) |
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|gh |1.4.1 |2024-03-28 |CRAN (R 4.4.0) |
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|gitcreds |0.1.2 |2022-09-08 |CRAN (R 4.4.1) |
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|glue |1.8.0 |2024-09-30 |CRAN (R 4.4.1) |
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|here |1.0.1 |2020-12-13 |CRAN (R 4.4.1) |
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|hms |1.1.3 |2023-03-21 |CRAN (R 4.4.0) |
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|htmltools |0.5.8.1 |2024-04-04 |CRAN (R 4.4.1) |
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|htmlwidgets |1.6.4 |2023-12-06 |CRAN (R 4.4.0) |
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|httpuv |1.6.16 |2025-04-16 |CRAN (R 4.4.1) |
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|httr2 |1.1.2 |2025-03-26 |CRAN (R 4.4.1) |
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|jquerylib |0.1.4 |2021-04-26 |CRAN (R 4.4.0) |
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|jsonlite |2.0.0 |2025-03-27 |CRAN (R 4.4.1) |
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|jsonvalidate |1.5.0 |2025-02-07 |CRAN (R 4.4.1) |
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|KernSmooth |2.23-26 |2025-01-01 |CRAN (R 4.4.1) |
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|keyring |1.3.2 |2023-12-11 |CRAN (R 4.4.0) |
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|knitr |1.50 |2025-03-16 |CRAN (R 4.4.1) |
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|later |1.4.2 |2025-04-08 |CRAN (R 4.4.1) |
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|lifecycle |1.0.4 |2023-11-07 |CRAN (R 4.4.1) |
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|magrittr |2.0.3 |2022-03-30 |CRAN (R 4.4.1) |
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|memoise |2.0.1 |2021-11-26 |CRAN (R 4.4.0) |
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|mime |0.13 |2025-03-17 |CRAN (R 4.4.1) |
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|miniUI |0.1.2 |2025-04-17 |CRAN (R 4.4.1) |
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|openssl |2.3.2 |2025-02-03 |CRAN (R 4.4.1) |
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|pak |0.8.0.2 |2025-04-08 |CRAN (R 4.4.1) |
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|phosphoricons |0.2.1 |2024-04-08 |CRAN (R 4.4.0) |
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|pillar |1.10.2 |2025-04-05 |CRAN (R 4.4.1) |
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|pkgbuild |1.4.7 |2025-03-24 |CRAN (R 4.4.1) |
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|pkgconfig |2.0.3 |2019-09-22 |CRAN (R 4.4.1) |
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|pkgload |1.4.0 |2024-06-28 |CRAN (R 4.4.0) |
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|profvis |0.4.0 |2024-09-20 |CRAN (R 4.4.1) |
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|promises |1.3.2 |2024-11-28 |CRAN (R 4.4.1) |
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|proxy |0.4-27 |2022-06-09 |CRAN (R 4.4.1) |
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|purrr |1.0.4 |2025-02-05 |CRAN (R 4.4.1) |
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|R6 |2.6.1 |2025-02-15 |CRAN (R 4.4.1) |
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|rappdirs |0.3.3 |2021-01-31 |CRAN (R 4.4.1) |
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|Rcpp |1.0.14 |2025-01-12 |CRAN (R 4.4.1) |
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|readr |2.1.5 |2024-01-10 |CRAN (R 4.4.0) |
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|remotes |2.5.0 |2024-03-17 |CRAN (R 4.4.1) |
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|renv |1.1.4 |2025-03-20 |CRAN (R 4.4.1) |
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|rlang |1.1.6 |2025-04-11 |CRAN (R 4.4.1) |
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|rprojroot |2.0.4 |2023-11-05 |CRAN (R 4.4.1) |
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|rsconnect |1.3.4 |2025-01-22 |CRAN (R 4.4.1) |
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|rstudioapi |0.17.1 |2024-10-22 |CRAN (R 4.4.1) |
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|sass |0.4.10 |2025-04-11 |CRAN (R 4.4.1) |
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|sessioninfo |1.2.3 |2025-02-05 |CRAN (R 4.4.1) |
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|shiny |1.10.0 |2024-12-14 |CRAN (R 4.4.1) |
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|shinyWidgets |0.9.0 |2025-02-21 |CRAN (R 4.4.1) |
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|sys |3.4.3 |2024-10-04 |CRAN (R 4.4.1) |
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|tibble |3.2.1 |2023-03-20 |CRAN (R 4.4.0) |
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|tidyselect |1.2.1 |2024-03-11 |CRAN (R 4.4.0) |
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|toastui |0.4.0 |2025-04-03 |CRAN (R 4.4.1) |
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|tzdb |0.5.0 |2025-03-15 |CRAN (R 4.4.1) |
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|urlchecker |1.0.1 |2021-11-30 |CRAN (R 4.4.1) |
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|usethis |3.1.0 |2024-11-26 |CRAN (R 4.4.1) |
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|V8 |6.0.3 |2025-03-26 |CRAN (R 4.4.1) |
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|vctrs |0.6.5 |2023-12-01 |CRAN (R 4.4.0) |
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|vroom |1.6.5 |2023-12-05 |CRAN (R 4.4.0) |
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|withr |3.0.2 |2024-10-28 |CRAN (R 4.4.1) |
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|xfun |0.52 |2025-04-02 |CRAN (R 4.4.1) |
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|xtable |1.8-4 |2019-04-21 |CRAN (R 4.4.1) |
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|yaml |2.3.10 |2024-07-26 |CRAN (R 4.4.1) |
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#### Current file: /Users/au301842/FreesearchR/R//app_version.R
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########
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app_version <- function()'v25.4.3.250428'
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app_version <- function()'v25.4.4.250428'
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########
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@ -5,6 +5,6 @@ account: agdamsbo
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server: shinyapps.io
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hostUrl: https://api.shinyapps.io/v1
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appId: 14600805
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bundleId: 10170345
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bundleId: 10191506
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url: https://agdamsbo.shinyapps.io/FreesearchR/
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version: 1
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Loading…
Add table
Reference in a new issue