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Andreas Gammelgaard Damsbo 2025-09-23 12:24:43 +02:00
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6 changed files with 94 additions and 39 deletions
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12
R/data_plots.R
View file

@ -15,9 +15,11 @@ data_visuals_ui <- function(id, tab_title = "Plots", ...) {
bslib::layout_sidebar(
sidebar = bslib::sidebar(
bslib::accordion(
id = "acc_plot",
multiple = FALSE,
bslib::accordion_panel(
title = "Creating plot",
value = "acc_pan_plot",
title = "Create plot",
icon = bsicons::bs_icon("graph-up"),
shiny::uiOutput(outputId = ns("primary")),
shiny::helpText(i18n$t('Only non-text variables are available for plotting. Go the "Data" to reclass data to plot.')),
@ -36,6 +38,7 @@ data_visuals_ui <- function(id, tab_title = "Plots", ...) {
shiny::helpText(i18n$t('Adjust settings, then press "Plot".'))
),
bslib::accordion_panel(
value = "acc_pan_download",
title = "Download",
icon = bsicons::bs_icon("download"),
shinyWidgets::noUiSliderInput(
@ -125,6 +128,11 @@ data_visuals_server <- function(id,
code = NULL
)
shiny::observe({
bslib::accordion_panel_update(id = "acc_plot", target = "acc_pan_plot",title = i18n$t("Create plot"))
bslib::accordion_panel_update(id = "acc_plot", target = "acc_pan_download",title = i18n$t("Download"))
})
# ## --- New attempt
#
# rv$plot.params <- shiny::reactive({
@ -407,7 +415,7 @@ data_visuals_server <- function(id,
plot <- rv$plot[[1]]
}
# browser()
shiny::withProgress(message = i18n$t("Drawing the plot. Hold on for a moment.."), {
shiny::withProgress(message = i18n$t("Drawing the plot. Hold tight for a moment.."), {
ggplot2::ggsave(
filename = file,
plot = plot,

6
R/missings-module.R
View file

@ -60,12 +60,12 @@ data_missings_server <- function(id,
if (is.null(variabler()) || variabler() == "" || !variabler() %in% names(datar())) {
if (anyNA(datar())){
title <- "No variable chosen for analysis"
title <- i18n$t("No variable chosen for analysis")
} else {
title <- "No missing observations"
title <- i18n$t("No missing observations")
}
} else {
title <- glue::glue("Missing vs non-missing observations in the variable **'{variabler()}'**")
title <- glue::glue(i18n$t("Missing vs non-missing observations in the variable **'{variabler()}'**"))
}
out <- rv$data() |>

21
R/regression-module.R
View file

@ -51,10 +51,11 @@ regression_ui <- function(id, ...) {
sidebar = bslib::sidebar(
shiny::uiOutput(outputId = ns("data_info"), inline = TRUE),
bslib::accordion(
id = "acc_reg",
open = "acc_reg",
multiple = FALSE,
bslib::accordion_panel(
value = "acc_reg",
value = "acc_pan_reg",
title = "Regression",
icon = bsicons::bs_icon("calculator"),
shiny::uiOutput(outputId = ns("outcome_var")),
@ -133,14 +134,15 @@ regression_ui <- function(id, ...) {
bslib::layout_sidebar(
sidebar = bslib::sidebar(
bslib::accordion(
open = "acc_reg",
id = "acc_coef_plot",
open = "acc_pan_coef_plot",
multiple = FALSE,
do.call(
bslib::accordion_panel,
c(
list(
value = "acc_plot",
title = "Coefficient plot",
value = "acc_pan_coef_plot",
title = "Coefficients plot",
icon = bsicons::bs_icon("bar-chart-steps"),
shiny::tags$br(),
shiny::uiOutput(outputId = ns("plot_model"))
@ -199,10 +201,11 @@ regression_ui <- function(id, ...) {
bslib::layout_sidebar(
sidebar = bslib::sidebar(
bslib::accordion(
open = "acc_reg",
id = "acc_checks",
open = "acc_pan_checks",
multiple = FALSE,
bslib::accordion_panel(
value = "acc_checks",
value = "acc_pan_checks",
title = "Checks",
icon = bsicons::bs_icon("clipboard-check"),
shiny::uiOutput(outputId = ns("plot_checks"))
@ -239,6 +242,12 @@ regression_server <- function(id,
}
})
shiny::observe({
bslib::accordion_panel_update(id = "acc_reg", target = "acc_pan_reg", title = i18n$t("Regression"))
bslib::accordion_panel_update(id = "acc_coef_plot", target = "acc_pan_coef_plot", title = i18n$t("Coefficients plot"))
bslib::accordion_panel_update(id = "acc_checks", target = "acc_pan_checks", title = i18n$t("Checks"))
})
output$data_info <- shiny::renderUI({
shiny::req(regression_vars())
shiny::req(data_r())

20
R/ui_elements.R
View file

@ -28,7 +28,7 @@ ui_elements <- function(selection) {
shiny::column(width = 2),
shiny::column(
width = 8,
shiny::uiOutput(outputId = "language_select"),
# shiny::uiOutput(outputId = "language_select"),
htmlOutput("intro_text")
# shiny::includeHTML(i18n$t("www/intro.html"))
# shiny::markdown(readLines(i18n$t("www/intro.md")))
@ -180,7 +180,7 @@ ui_elements <- function(selection) {
width = 9,
shiny::uiOutput(outputId = "data_info", inline = TRUE),
shiny::tags$p(
i18n$t("Below you find a summary table for quick insigths, and on the right you can visualise data classes, browse data and apply different data filters.")
i18n$t("Below you find a summary table for quick insigths, and on the right you can visualise data classes, browse observations and apply different data filters.")
)
),
shiny::column(
@ -195,7 +195,7 @@ ui_elements <- function(selection) {
shiny::br(),
shiny::actionButton(
inputId = "modal_browse",
label = i18n$t("Browse data"),
label = i18n$t("Browse observations"),
width = "100%",
disabled = TRUE
),
@ -350,11 +350,12 @@ ui_elements <- function(selection) {
sidebar = bslib::sidebar(
shiny::uiOutput(outputId = "data_info_nochar", inline = TRUE),
bslib::accordion(
id="acc_chars",
open = "acc_chars",
multiple = FALSE,
bslib::accordion_panel(
open = TRUE,
value = "acc_chars",
value = "acc_pan_chars",
title = "Settings",
icon = bsicons::bs_icon("table"),
shiny::uiOutput("strat_var"),
@ -395,11 +396,12 @@ ui_elements <- function(selection) {
sidebar = bslib::sidebar(
# shiny::uiOutput(outputId = "data_info_nochar", inline = TRUE),
bslib::accordion(
id="acc_cor",
open = "acc_chars",
multiple = FALSE,
bslib::accordion_panel(
value = "acc_cor",
title = "Correlations",
value = "acc_pan_cor",
title = "Settings",
icon = bsicons::bs_icon("bounding-box"),
shiny::uiOutput("outcome_var_cor"),
shiny::helpText("To avoid evaluating the correlation of the outcome variable, this can be excluded from the plot or select 'none'."),
@ -427,17 +429,19 @@ ui_elements <- function(selection) {
bslib::layout_sidebar(
sidebar = bslib::sidebar(
bslib::accordion(
id = "acc_mis",
open = "acc_chars",
multiple = FALSE,
bslib::accordion_panel(
vlaue = "acc_mis",
title = "Missings",
value = "acc_pan_mis",
title = "Settings",
icon = bsicons::bs_icon("x-circle"),
shiny::uiOutput("missings_var"),
shiny::helpText("To consider if data is missing by random, choose the outcome/dependent variable, if it has any missings to evaluate if there is a significant difference across other variables depending on missing data or not.")
)
)
),
validation_ui("validation_mcar"),
data_missings_ui(id = "missingness")
)
)

51
inst/translations/translation_da.csv
View file

@ -18,9 +18,7 @@
"<p>The <em><strong>FreesearchR</strong></em> app only stores data for analyses, but please only use with sensitive data when running locally. <a href='https://agdamsbo.github.io/FreesearchR/#run-locally-on-your-own-machine'>Read more here</a></p>","<p><em><strong>FreesearchR</strong></em> opbevarer alene data i forbindelse med din analyse, men du bør kun behandle personfølsomme data når du kører <em><strong>FreesearchR</strong></em> direkte på dine egen maskine. <a href='https://agdamsbo.github.io/FreesearchR/#run-locally-on-your-own-machine'>Læs mere her</a></p>"
"Overview and filter","Overblik og filtre"
"Overview and filtering","Overblik og filtrering"
"Below you find a summary table for quick insigths, and on the right you can visualise data classes, browse data and apply different data filters.","Below you find a summary table for quick insigths, and on the right you can visualise data classes, browse data and apply different data filters."
"Visual overview","Visuelt overblik"
"Browse data","Udforsk data"
"Filter data types","Filtrer datatyper"
"Filter observations","Filtrer observationer"
"Apply filter on observation","Anvend filtre af observationer"
@ -113,24 +111,23 @@
"and","og"
"from each pair","fra hvert par"
"Only non-text variables are available for plotting. Go the ""Data"" to reclass data to plot.","Only non-text variables are available for plotting. Go the ""Data"" to reclass data to plot."
"Plot","Plot"
"Plot","Tegn"
"Adjust settings, then press ""Plot"".","Adjust settings, then press ""Plot""."
"Plot height (mm)","Plot height (mm)"
"Plot width (mm)","Plot width (mm)"
"File format","File format"
"Download plot","Download plot"
"Select variable","Select variable"
"Response variable","Response variable"
"Plot type","Plot type"
"Please select","Please select"
"Additional variables","Additional variables"
"Secondary variable","Secondary variable"
"No variable","No variable"
"Grouping variable","Grouping variable"
"No stratification","No stratification"
"Drawing the plot. Hold tight for a moment..","Drawing the plot. Hold tight for a moment.."
"#Plotting\n","#Plotting\n"
"Drawing the plot. Hold on for a moment..","Drawing the plot. Hold on for a moment.."
"Download plot","Download grafik"
"Select variable","Vælg variabel"
"Response variable","Svarvariable"
"Plot type","Type af grafik"
"Please select","Vælg"
"Additional variables","Yderligere variabler"
"Secondary variable","Sekundær variabel"
"No variable","Ingen variabel"
"Grouping variable","Variabel til gruppering"
"No stratification","Ingen stratificering"
"Drawing the plot. Hold tight for a moment..","Tegner grafikken. Spænd selen.."
"#Plotting\n","#Tegner\n"
"Stacked horizontal bars","Stacked horizontal bars"
"A classical way of visualising the distribution of an ordinal scale like the modified Ranking Scale and known as Grotta bars","A classical way of visualising the distribution of an ordinal scale like the modified Ranking Scale and known as Grotta bars"
"Violin plot","Violin plot"
@ -141,5 +138,25 @@
"A classic way of showing the association between to variables","A classic way of showing the association between to variables"
"Box plot","Box plot"
"A classic way to plot data distribution by groups","A classic way to plot data distribution by groups"
"Euler diagram","Euler diagram"
"Euler diagram","Eulerdiagram"
"Generate area-proportional Euler diagrams to display set relationships","Generate area-proportional Euler diagrams to display set relationships"
"Documentation","Dokumentation"
"Data is only stored for analyses and deleted when the app is closed.","Data is only stored for analyses and deleted when the app is closed."
"Consider [running ***FreesearchR*** locally](https://agdamsbo.github.io/FreesearchR/#run-locally-on-your-own-machine) if working with sensitive data.","Consider [running ***FreesearchR*** locally](https://agdamsbo.github.io/FreesearchR/#run-locally-on-your-own-machine) if working with sensitive data."
"Feedback","Feedback"
"License: AGPLv3","Licens: AGPLv3"
"Source","Kilde"
"There are {p_miss} % missing observations.","There are {p_miss} % missing observations."
"Data includes {n_pairs} pairs of highly correlated variables.","Der er {n_pairs} variabel-par, der er stærkt internt korrelerede."
"Create plot","Dan grafik"
"Coefficients plot","Koefficientgraf"
"Checks","Checks"
"Below you find a summary table for quick insigths, and on the right you can visualise data classes, browse observations and apply different data filters.","Below you find a summary table for quick insigths, and on the right you can visualise data classes, browse observations and apply different data filters."
"Browse observations","Gennemse observationer"
"Settings","Indstillinger"
"The following error occured on determining correlations:","The following error occured on determining correlations:"
"We encountered the following error creating your report:","We encountered the following error creating your report:"
"No variable chosen for analysis","No variable chosen for analysis"
"No missing observations","No missing observations"
"Missing vs non-missing observations in the variable **'{variabler()}'**","Missing vs non-missing observations in the variable **'{variabler()}'**"
"There is a significant correlation between {n_nonmcar} variables and missing observations in the outcome variable {outcome}.","There is a significant correlation between {n_nonmcar} variables and missing observations in the outcome variable {outcome}."

1 en da
18 <p>The <em><strong>FreesearchR</strong></em> app only stores data for analyses, but please only use with sensitive data when running locally. <a href='https://agdamsbo.github.io/FreesearchR/#run-locally-on-your-own-machine'>Read more here</a></p> <p><em><strong>FreesearchR</strong></em> opbevarer alene data i forbindelse med din analyse, men du bør kun behandle personfølsomme data når du kører <em><strong>FreesearchR</strong></em> direkte på dine egen maskine. <a href='https://agdamsbo.github.io/FreesearchR/#run-locally-on-your-own-machine'>Læs mere her</a></p>
19 Overview and filter Overblik og filtre
20 Overview and filtering Overblik og filtrering
Below you find a summary table for quick insigths, and on the right you can visualise data classes, browse data and apply different data filters. Below you find a summary table for quick insigths, and on the right you can visualise data classes, browse data and apply different data filters.
21 Visual overview Visuelt overblik
Browse data Udforsk data
22 Filter data types Filtrer datatyper
23 Filter observations Filtrer observationer
24 Apply filter on observation Anvend filtre af observationer
111 and og
112 from each pair fra hvert par
113 Only non-text variables are available for plotting. Go the "Data" to reclass data to plot. Only non-text variables are available for plotting. Go the "Data" to reclass data to plot.
114 Plot Plot Tegn
115 Adjust settings, then press "Plot". Adjust settings, then press "Plot".
116 Plot height (mm) Plot height (mm)
117 Plot width (mm) Plot width (mm)
118 File format File format
119 Download plot Download plot Download grafik
120 Select variable Select variable Vælg variabel
121 Response variable Response variable Svarvariable
122 Plot type Plot type Type af grafik
123 Please select Please select Vælg
124 Additional variables Additional variables Yderligere variabler
125 Secondary variable Secondary variable Sekundær variabel
126 No variable No variable Ingen variabel
127 Grouping variable Grouping variable Variabel til gruppering
128 No stratification No stratification Ingen stratificering
129 Drawing the plot. Hold tight for a moment.. Drawing the plot. Hold tight for a moment.. Tegner grafikken. Spænd selen..
130 #Plotting\n #Plotting\n #Tegner\n
Drawing the plot. Hold on for a moment.. Drawing the plot. Hold on for a moment..
131 Stacked horizontal bars Stacked horizontal bars
132 A classical way of visualising the distribution of an ordinal scale like the modified Ranking Scale and known as Grotta bars A classical way of visualising the distribution of an ordinal scale like the modified Ranking Scale and known as Grotta bars
133 Violin plot Violin plot
138 A classic way of showing the association between to variables A classic way of showing the association between to variables
139 Box plot Box plot
140 A classic way to plot data distribution by groups A classic way to plot data distribution by groups
141 Euler diagram Euler diagram Eulerdiagram
142 Generate area-proportional Euler diagrams to display set relationships Generate area-proportional Euler diagrams to display set relationships
143 Documentation Dokumentation
144 Data is only stored for analyses and deleted when the app is closed. Data is only stored for analyses and deleted when the app is closed.
145 Consider [running ***FreesearchR*** locally](https://agdamsbo.github.io/FreesearchR/#run-locally-on-your-own-machine) if working with sensitive data. Consider [running ***FreesearchR*** locally](https://agdamsbo.github.io/FreesearchR/#run-locally-on-your-own-machine) if working with sensitive data.
146 Feedback Feedback
147 License: AGPLv3 Licens: AGPLv3
148 Source Kilde
149 There are {p_miss} % missing observations. There are {p_miss} % missing observations.
150 Data includes {n_pairs} pairs of highly correlated variables. Der er {n_pairs} variabel-par, der er stærkt internt korrelerede.
151 Create plot Dan grafik
152 Coefficients plot Koefficientgraf
153 Checks Checks
154 Below you find a summary table for quick insigths, and on the right you can visualise data classes, browse observations and apply different data filters. Below you find a summary table for quick insigths, and on the right you can visualise data classes, browse observations and apply different data filters.
155 Browse observations Gennemse observationer
156 Settings Indstillinger
157 The following error occured on determining correlations: The following error occured on determining correlations:
158 We encountered the following error creating your report: We encountered the following error creating your report:
159 No variable chosen for analysis No variable chosen for analysis
160 No missing observations No missing observations
161 Missing vs non-missing observations in the variable **'{variabler()}'** Missing vs non-missing observations in the variable **'{variabler()}'**
162 There is a significant correlation between {n_nonmcar} variables and missing observations in the outcome variable {outcome}. There is a significant correlation between {n_nonmcar} variables and missing observations in the outcome variable {outcome}.

23
inst/translations/translation_sw.csv
View file

@ -18,9 +18,7 @@
"<p>The <em><strong>FreesearchR</strong></em> app only stores data for analyses, but please only use with sensitive data when running locally. <a href='https://agdamsbo.github.io/FreesearchR/#run-locally-on-your-own-machine'>Read more here</a></p>","<p>The <em><strong>FreesearchR</strong></em> app only stores data for analyses, but please only use with sensitive data when running locally. <a href='https://agdamsbo.github.io/FreesearchR/#run-locally-on-your-own-machine'>Read more here</a></p>"
"Overview and filter","Overview and filter"
"Overview and filtering","Overview and filtering"
"Below you find a summary table for quick insigths, and on the right you can visualise data classes, browse data and apply different data filters.","Below you find a summary table for quick insigths, and on the right you can visualise data classes, browse data and apply different data filters."
"Visual overview","Visual overview"
"Browse data","Browse data"
"Filter data types","Filter data types"
"Filter observations","Filter observations"
"Apply filter on observation","Apply filter on observation"
@ -130,7 +128,6 @@
"No stratification","No stratification"
"Drawing the plot. Hold tight for a moment..","Drawing the plot. Hold tight for a moment.."
"#Plotting\n","#Plotting\n"
"Drawing the plot. Hold on for a moment..","Drawing the plot. Hold on for a moment.."
"Stacked horizontal bars","Stacked horizontal bars"
"A classical way of visualising the distribution of an ordinal scale like the modified Ranking Scale and known as Grotta bars","A classical way of visualising the distribution of an ordinal scale like the modified Ranking Scale and known as Grotta bars"
"Violin plot","Violin plot"
@ -143,3 +140,23 @@
"A classic way to plot data distribution by groups","A classic way to plot data distribution by groups"
"Euler diagram","Euler diagram"
"Generate area-proportional Euler diagrams to display set relationships","Generate area-proportional Euler diagrams to display set relationships"
"Documentation","Documentation"
"Data is only stored for analyses and deleted when the app is closed.","Data is only stored for analyses and deleted when the app is closed."
"Consider [running ***FreesearchR*** locally](https://agdamsbo.github.io/FreesearchR/#run-locally-on-your-own-machine) if working with sensitive data.","Consider [running ***FreesearchR*** locally](https://agdamsbo.github.io/FreesearchR/#run-locally-on-your-own-machine) if working with sensitive data."
"Feedback","Feedback"
"License: AGPLv3","License: AGPLv3"
"Source","Source"
"There are {p_miss} % missing observations.","There are {p_miss} % missing observations."
"Data includes {n_pairs} pairs of highly correlated variables.","Data includes {n_pairs} pairs of highly correlated variables."
"Create plot","Create plot"
"Coefficients plot","Coefficients plot"
"Checks","Checks"
"Below you find a summary table for quick insigths, and on the right you can visualise data classes, browse observations and apply different data filters.","Below you find a summary table for quick insigths, and on the right you can visualise data classes, browse observations and apply different data filters."
"Browse observations","Browse observations"
"Settings","Settings"
"The following error occured on determining correlations:","The following error occured on determining correlations:"
"We encountered the following error creating your report:","We encountered the following error creating your report:"
"No variable chosen for analysis","No variable chosen for analysis"
"No missing observations","No missing observations"
"Missing vs non-missing observations in the variable **'{variabler()}'**","Missing vs non-missing observations in the variable **'{variabler()}'**"
"There is a significant correlation between {n_nonmcar} variables and missing observations in the outcome variable {outcome}.","There is a significant correlation between {n_nonmcar} variables and missing observations in the outcome variable {outcome}."

1 en sw
18 <p>The <em><strong>FreesearchR</strong></em> app only stores data for analyses, but please only use with sensitive data when running locally. <a href='https://agdamsbo.github.io/FreesearchR/#run-locally-on-your-own-machine'>Read more here</a></p> <p>The <em><strong>FreesearchR</strong></em> app only stores data for analyses, but please only use with sensitive data when running locally. <a href='https://agdamsbo.github.io/FreesearchR/#run-locally-on-your-own-machine'>Read more here</a></p>
19 Overview and filter Overview and filter
20 Overview and filtering Overview and filtering
Below you find a summary table for quick insigths, and on the right you can visualise data classes, browse data and apply different data filters. Below you find a summary table for quick insigths, and on the right you can visualise data classes, browse data and apply different data filters.
21 Visual overview Visual overview
Browse data Browse data
22 Filter data types Filter data types
23 Filter observations Filter observations
24 Apply filter on observation Apply filter on observation
128 No stratification No stratification
129 Drawing the plot. Hold tight for a moment.. Drawing the plot. Hold tight for a moment..
130 #Plotting\n #Plotting\n
Drawing the plot. Hold on for a moment.. Drawing the plot. Hold on for a moment..
131 Stacked horizontal bars Stacked horizontal bars
132 A classical way of visualising the distribution of an ordinal scale like the modified Ranking Scale and known as Grotta bars A classical way of visualising the distribution of an ordinal scale like the modified Ranking Scale and known as Grotta bars
133 Violin plot Violin plot
140 A classic way to plot data distribution by groups A classic way to plot data distribution by groups
141 Euler diagram Euler diagram
142 Generate area-proportional Euler diagrams to display set relationships Generate area-proportional Euler diagrams to display set relationships
143 Documentation Documentation
144 Data is only stored for analyses and deleted when the app is closed. Data is only stored for analyses and deleted when the app is closed.
145 Consider [running ***FreesearchR*** locally](https://agdamsbo.github.io/FreesearchR/#run-locally-on-your-own-machine) if working with sensitive data. Consider [running ***FreesearchR*** locally](https://agdamsbo.github.io/FreesearchR/#run-locally-on-your-own-machine) if working with sensitive data.
146 Feedback Feedback
147 License: AGPLv3 License: AGPLv3
148 Source Source
149 There are {p_miss} % missing observations. There are {p_miss} % missing observations.
150 Data includes {n_pairs} pairs of highly correlated variables. Data includes {n_pairs} pairs of highly correlated variables.
151 Create plot Create plot
152 Coefficients plot Coefficients plot
153 Checks Checks
154 Below you find a summary table for quick insigths, and on the right you can visualise data classes, browse observations and apply different data filters. Below you find a summary table for quick insigths, and on the right you can visualise data classes, browse observations and apply different data filters.
155 Browse observations Browse observations
156 Settings Settings
157 The following error occured on determining correlations: The following error occured on determining correlations:
158 We encountered the following error creating your report: We encountered the following error creating your report:
159 No variable chosen for analysis No variable chosen for analysis
160 No missing observations No missing observations
161 Missing vs non-missing observations in the variable **'{variabler()}'** Missing vs non-missing observations in the variable **'{variabler()}'**
162 There is a significant correlation between {n_nonmcar} variables and missing observations in the outcome variable {outcome}. There is a significant correlation between {n_nonmcar} variables and missing observations in the outcome variable {outcome}.