diff --git a/DESCRIPTION b/DESCRIPTION index 07d9589..b3a0612 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,6 +1,6 @@ Package: FreesearchR Title: Browser Based Data Analysis -Version: 25.4.4 +Version: 25.4.3 Authors@R: person("Andreas Gammelgaard", "Damsbo", , "agdamsbo@clin.au.dk", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-7559-1154")) diff --git a/NEWS.md b/NEWS.md index 69adfef..3dd549c 100644 --- a/NEWS.md +++ b/NEWS.md @@ -1,7 +1,3 @@ -# FreesearchR 25.4.4 - -Polishing and moved hosted app to new address to fully reflect name change: [https://agdamsbo.shinyapps.io/FreesearchR/](https://agdamsbo.shinyapps.io/FreesearchR/) - # FreesearchR 25.4.3 - *NEW*: Added a variables type filter to easily exclude unwanted types. This also includes having data type rather than data class in the summary table. Will evaluate. Types are a simpler, more practical version of the *R* data class to easy interpretation. @@ -10,6 +6,8 @@ Polishing and moved hosted app to new address to fully reflect name change: [htt - *IMPROVED*: docs are updated and much more comprehensive. They will be continuously updated. +Polishing and moved hosted app to new address to fully reflect name change: [https://agdamsbo.shinyapps.io/FreesearchR/](https://agdamsbo.shinyapps.io/FreesearchR/) + # FreesearchR 25.4.2 Polished and simplified data import module including a much improved REDCap import module. diff --git a/R/sysdata.rda b/R/sysdata.rda index dc59c7a..b354401 100644 Binary files a/R/sysdata.rda and b/R/sysdata.rda differ diff --git a/SESSION.md b/SESSION.md index daccb88..46f2bfb 100644 --- a/SESSION.md +++ b/SESSION.md @@ -1,175 +1,80 @@ -------------------------------------------------------------------------------- -------------------------------- R environment --------------------------------- -------------------------------------------------------------------------------- -|setting |value | -|:-----------|:------------------------------------------| -|version |R version 4.4.1 (2024-06-14) | -|os |macOS 15.3.1 | -|system |aarch64, darwin20 | -|ui |RStudio | -|language |(EN) | -|collate |en_US.UTF-8 | -|ctype |en_US.UTF-8 | -|tz |Europe/Copenhagen | -|date |2025-04-24 | -|rstudio |2024.12.1+563 Kousa Dogwood (desktop) | -|pandoc |3.6.4 @ /opt/homebrew/bin/ (via rmarkdown) | -|quarto |1.6.40 @ /usr/local/bin/quarto | -|FreesearchR |25.4.4.250424 | +|setting |value | +|:-----------|:-------------------------------------| +|version |R version 4.4.1 (2024-06-14) | +|os |macOS 15.3.1 | +|system |aarch64, darwin20 | +|ui |RStudio | +|language |(EN) | +|collate |en_US.UTF-8 | +|ctype |en_US.UTF-8 | +|tz |Europe/Copenhagen | +|date |2025-04-24 | +|rstudio |2024.12.1+563 Kousa Dogwood (desktop) | +|pandoc |3.6.4 @ /opt/homebrew/bin/pandoc | +|quarto |1.6.40 @ /usr/local/bin/quarto | +|FreesearchR |25.4.4.250424 | -------------------------------------------------------------------------------- ----------------------------------- packages ----------------------------------- -------------------------------------------------------------------------------- -|package |loadedversion |date |source | -|:-------------|:-------------|:----------|:--------------| -|apexcharter |0.4.4 |2024-09-06 |CRAN (R 4.4.1) | -|askpass |1.2.1 |2024-10-04 |CRAN (R 4.4.1) | -|assertthat |0.2.1 |2019-03-21 |CRAN (R 4.4.1) | -|backports |1.5.0 |2024-05-23 |CRAN (R 4.4.1) | -|bayestestR |0.15.2 |2025-02-07 |CRAN (R 4.4.1) | -|bit |4.6.0 |2025-03-06 |CRAN (R 4.4.1) | -|bit64 |4.6.0-1 |2025-01-16 |CRAN (R 4.4.1) | -|boot |1.3-31 |2024-08-28 |CRAN (R 4.4.1) | -|broom |1.0.8 |2025-03-28 |CRAN (R 4.4.1) | -|broom.helpers |1.20.0 |2025-03-06 |CRAN (R 4.4.1) | -|bsicons |0.1.2 |2023-11-04 |CRAN (R 4.4.0) | -|bslib |0.9.0 |2025-01-30 |CRAN (R 4.4.1) | -|cachem |1.1.0 |2024-05-16 |CRAN (R 4.4.1) | -|cellranger |1.1.0 |2016-07-27 |CRAN (R 4.4.0) | -|class |7.3-23 |2025-01-01 |CRAN (R 4.4.1) | -|classInt |0.4-11 |2025-01-08 |CRAN (R 4.4.1) | -|cli |3.6.4 |2025-02-13 |CRAN (R 4.4.1) | -|codetools |0.2-20 |2024-03-31 |CRAN (R 4.4.1) | -|colorspace |2.1-1 |2024-07-26 |CRAN (R 4.4.1) | -|commonmark |1.9.5 |2025-03-17 |CRAN (R 4.4.1) | -|correlation |0.8.7 |2025-03-03 |CRAN (R 4.4.1) | -|crayon |1.5.3 |2024-06-20 |CRAN (R 4.4.1) | -|crosstalk |1.2.1 |2023-11-23 |CRAN (R 4.4.0) | -|curl |6.2.2 |2025-03-24 |CRAN (R 4.4.1) | -|data.table |1.17.0 |2025-02-22 |CRAN (R 4.4.1) | -|datamods |1.5.3 |2024-10-02 |CRAN (R 4.4.1) | -|datawizard |1.0.2 |2025-03-24 |CRAN (R 4.4.1) | -|desc |1.4.3 |2023-12-10 |CRAN (R 4.4.1) | -|devtools |2.4.5 |2022-10-11 |CRAN (R 4.4.0) | -|DHARMa |0.4.7 |2024-10-18 |CRAN (R 4.4.1) | -|digest |0.6.37 |2024-08-19 |CRAN (R 4.4.1) | -|dplyr |1.1.4 |2023-11-17 |CRAN (R 4.4.0) | -|DT |0.33 |2024-04-04 |CRAN (R 4.4.0) | -|e1071 |1.7-16 |2024-09-16 |CRAN (R 4.4.1) | -|easystats |0.7.4 |2025-02-06 |CRAN (R 4.4.1) | -|effectsize |1.0.0 |2024-12-10 |CRAN (R 4.4.1) | -|ellipsis |0.3.2 |2021-04-29 |CRAN (R 4.4.1) | -|esquisse |2.1.0 |2025-02-21 |CRAN (R 4.4.1) | -|evaluate |1.0.3 |2025-01-10 |CRAN (R 4.4.1) | -|farver |2.1.2 |2024-05-13 |CRAN (R 4.4.1) | -|fastmap |1.2.0 |2024-05-15 |CRAN (R 4.4.1) | -|fontawesome |0.5.3 |2024-11-16 |CRAN (R 4.4.1) | -|forcats |1.0.0 |2023-01-29 |CRAN (R 4.4.0) | -|foreach |1.5.2 |2022-02-02 |CRAN (R 4.4.0) | -|fs |1.6.6 |2025-04-12 |CRAN (R 4.4.1) | -|generics |0.1.3 |2022-07-05 |CRAN (R 4.4.1) | -|ggplot2 |3.5.2 |2025-04-09 |CRAN (R 4.4.1) | -|glmnet |4.1-8 |NA |NA | -|glue |1.8.0 |2024-09-30 |CRAN (R 4.4.1) | -|gt |1.0.0 |2025-04-05 |CRAN (R 4.4.1) | -|gtable |0.3.6 |2024-10-25 |CRAN (R 4.4.1) | -|gtsummary |2.2.0 |2025-04-14 |CRAN (R 4.4.1) | -|haven |2.5.4 |2023-11-30 |CRAN (R 4.4.0) | -|here |1.0.1 |2020-12-13 |CRAN (R 4.4.1) | -|hms |1.1.3 |2023-03-21 |CRAN (R 4.4.0) | -|htmltools |0.5.8.1 |2024-04-04 |CRAN (R 4.4.1) | -|htmlwidgets |1.6.4 |2023-12-06 |CRAN (R 4.4.0) | -|httpuv |1.6.16 |2025-04-16 |CRAN (R 4.4.1) | -|IDEAFilter |0.2.0 |2024-04-15 |CRAN (R 4.4.0) | -|insight |1.2.0 |2025-04-22 |CRAN (R 4.4.1) | -|iterators |1.0.14 |2022-02-05 |CRAN (R 4.4.1) | -|jquerylib |0.1.4 |2021-04-26 |CRAN (R 4.4.0) | -|jsonlite |2.0.0 |2025-03-27 |CRAN (R 4.4.1) | -|KernSmooth |2.23-26 |2025-01-01 |CRAN (R 4.4.1) | -|keyring |1.3.2 |2023-12-11 |CRAN (R 4.4.0) | -|knitr |1.50 |2025-03-16 |CRAN (R 4.4.1) | -|later |1.4.2 |2025-04-08 |CRAN (R 4.4.1) | -|lattice |0.22-7 |2025-04-02 |CRAN (R 4.4.1) | -|lifecycle |1.0.4 |2023-11-07 |CRAN (R 4.4.1) | -|lme4 |1.1-37 |2025-03-26 |CRAN (R 4.4.1) | -|magrittr |2.0.3 |2022-03-30 |CRAN (R 4.4.1) | -|MASS |7.3-65 |2025-02-28 |CRAN (R 4.4.1) | -|Matrix |1.7-3 |2025-03-11 |CRAN (R 4.4.1) | -|memoise |2.0.1 |2021-11-26 |CRAN (R 4.4.0) | -|mime |0.13 |2025-03-17 |CRAN (R 4.4.1) | -|miniUI |0.1.2 |2025-04-17 |CRAN (R 4.4.1) | -|minqa |1.2.8 |2024-08-17 |CRAN (R 4.4.1) | -|modelbased |0.10.0 |2025-03-10 |CRAN (R 4.4.1) | -|munsell |0.5.1 |2024-04-01 |CRAN (R 4.4.1) | -|nlme |3.1-168 |2025-03-31 |CRAN (R 4.4.1) | -|nloptr |2.2.1 |2025-03-17 |CRAN (R 4.4.1) | -|openssl |2.3.2 |2025-02-03 |CRAN (R 4.4.1) | -|openxlsx2 |1.14 |2025-03-20 |CRAN (R 4.4.1) | -|parameters |0.24.2 |2025-03-04 |CRAN (R 4.4.1) | -|patchwork |1.3.0 |2024-09-16 |CRAN (R 4.4.1) | -|performance |0.13.0 |2025-01-15 |CRAN (R 4.4.1) | -|phosphoricons |0.2.1 |2024-04-08 |CRAN (R 4.4.0) | -|pillar |1.10.2 |2025-04-05 |CRAN (R 4.4.1) | -|pkgbuild |1.4.7 |2025-03-24 |CRAN (R 4.4.1) | -|pkgconfig |2.0.3 |2019-09-22 |CRAN (R 4.4.1) | -|pkgload |1.4.0 |2024-06-28 |CRAN (R 4.4.0) | -|processx |3.8.6 |2025-02-21 |CRAN (R 4.4.1) | -|profvis |0.4.0 |2024-09-20 |CRAN (R 4.4.1) | -|promises |1.3.2 |2024-11-28 |CRAN (R 4.4.1) | -|proxy |0.4-27 |2022-06-09 |CRAN (R 4.4.1) | -|ps |1.9.1 |2025-04-12 |CRAN (R 4.4.1) | -|purrr |1.0.4 |2025-02-05 |CRAN (R 4.4.1) | -|quarto |1.4.4 |2024-07-20 |CRAN (R 4.4.0) | -|R6 |2.6.1 |2025-02-15 |CRAN (R 4.4.1) | -|ragg |1.4.0 |2025-04-10 |CRAN (R 4.4.1) | -|rbibutils |2.3 |2024-10-04 |CRAN (R 4.4.1) | -|RColorBrewer |1.1-3 |2022-04-03 |CRAN (R 4.4.1) | -|Rcpp |1.0.14 |2025-01-12 |CRAN (R 4.4.1) | -|Rdpack |2.6.4 |2025-04-09 |CRAN (R 4.4.1) | -|reactable |0.4.4 |2023-03-12 |CRAN (R 4.4.0) | -|readODS |2.3.2 |2025-01-13 |CRAN (R 4.4.1) | -|readr |2.1.5 |2024-01-10 |CRAN (R 4.4.0) | -|readxl |1.4.5 |2025-03-07 |CRAN (R 4.4.1) | -|REDCapCAST |25.3.2 |2025-03-10 |CRAN (R 4.4.1) | -|REDCapR |1.4.0 |2025-01-11 |CRAN (R 4.4.1) | -|reformulas |0.4.0 |2024-11-03 |CRAN (R 4.4.1) | -|remotes |2.5.0 |2024-03-17 |CRAN (R 4.4.1) | -|renv |1.1.4 |2025-03-20 |CRAN (R 4.4.1) | -|report |0.6.1 |2025-02-07 |CRAN (R 4.4.1) | -|rio |1.2.3 |2024-09-25 |CRAN (R 4.4.1) | -|rlang |1.1.6 |2025-04-11 |CRAN (R 4.4.1) | -|rmarkdown |2.29 |2024-11-04 |CRAN (R 4.4.1) | -|rprojroot |2.0.4 |2023-11-05 |CRAN (R 4.4.1) | -|rsconnect |1.3.4 |2025-01-22 |CRAN (R 4.4.1) | -|rstudioapi |0.17.1 |2024-10-22 |CRAN (R 4.4.1) | -|sass |0.4.10 |2025-04-11 |CRAN (R 4.4.1) | -|scales |1.3.0 |2023-11-28 |CRAN (R 4.4.0) | -|see |0.11.0 |2025-03-11 |CRAN (R 4.4.1) | -|sessioninfo |1.2.3 |2025-02-05 |CRAN (R 4.4.1) | -|shape |1.4.6.1 |NA |NA | -|shiny |1.10.0 |2024-12-14 |CRAN (R 4.4.1) | -|shinybusy |0.3.3 |2024-03-09 |CRAN (R 4.4.0) | -|shinyTime |1.0.3 |2022-08-19 |CRAN (R 4.4.0) | -|shinyWidgets |0.9.0 |2025-02-21 |CRAN (R 4.4.1) | -|stringi |1.8.7 |2025-03-27 |CRAN (R 4.4.1) | -|stringr |1.5.1 |2023-11-14 |CRAN (R 4.4.0) | -|survival |3.8-3 |2024-12-17 |CRAN (R 4.4.1) | -|systemfonts |1.2.2 |2025-04-04 |CRAN (R 4.4.1) | -|textshaping |1.0.0 |2025-01-20 |CRAN (R 4.4.1) | -|tibble |3.2.1 |2023-03-20 |CRAN (R 4.4.0) | -|tidyr |1.3.1 |2024-01-24 |CRAN (R 4.4.1) | -|tidyselect |1.2.1 |2024-03-11 |CRAN (R 4.4.0) | -|toastui |0.4.0 |2025-04-03 |CRAN (R 4.4.1) | -|tzdb |0.5.0 |2025-03-15 |CRAN (R 4.4.1) | -|urlchecker |1.0.1 |2021-11-30 |CRAN (R 4.4.1) | -|usethis |3.1.0 |2024-11-26 |CRAN (R 4.4.1) | -|vctrs |0.6.5 |2023-12-01 |CRAN (R 4.4.0) | -|vroom |1.6.5 |2023-12-05 |CRAN (R 4.4.0) | -|withr |3.0.2 |2024-10-28 |CRAN (R 4.4.1) | -|writexl |1.5.4 |2025-04-15 |CRAN (R 4.4.1) | -|xfun |0.52 |2025-04-02 |CRAN (R 4.4.1) | -|xml2 |1.3.8 |2025-03-14 |CRAN (R 4.4.1) | -|xtable |1.8-4 |2019-04-21 |CRAN (R 4.4.1) | -|yaml |2.3.10 |2024-07-26 |CRAN (R 4.4.1) | -|zip |2.3.2 |2025-02-01 |CRAN (R 4.4.1) | +|package |loadedversion |date |source | +|:-----------|:-------------|:----------|:--------------| +|bit |4.6.0 |2025-03-06 |CRAN (R 4.4.1) | +|bit64 |4.6.0-1 |2025-01-16 |CRAN (R 4.4.1) | +|cachem |1.1.0 |2024-05-16 |CRAN (R 4.4.1) | +|cli |3.6.4 |2025-04-23 |CRAN (R 4.4.1) | +|crayon |1.5.3 |2024-06-20 |CRAN (R 4.4.1) | +|desc |1.4.3 |2023-12-10 |CRAN (R 4.4.1) | +|devtools |2.4.5 |2022-10-11 |CRAN (R 4.4.0) | +|digest |0.6.37 |2024-08-19 |CRAN (R 4.4.1) | +|dplyr |1.1.4 |2023-11-17 |CRAN (R 4.4.0) | +|ellipsis |0.3.2 |2021-04-29 |CRAN (R 4.4.1) | +|evaluate |1.0.3 |2025-01-10 |CRAN (R 4.4.1) | +|fastmap |1.2.0 |2024-05-15 |CRAN (R 4.4.1) | +|fs |1.6.6 |2025-04-12 |CRAN (R 4.4.1) | +|generics |0.1.3 |2022-07-05 |CRAN (R 4.4.1) | +|glue |1.8.0 |2024-09-30 |CRAN (R 4.4.1) | +|here |1.0.1 |2020-12-13 |CRAN (R 4.4.1) | +|hms |1.1.3 |2023-03-21 |CRAN (R 4.4.0) | +|htmltools |0.5.8.1 |2024-04-04 |CRAN (R 4.4.1) | +|htmlwidgets |1.6.4 |2023-12-06 |CRAN (R 4.4.0) | +|httpuv |1.6.16 |2025-04-16 |CRAN (R 4.4.1) | +|knitr |1.50 |2025-03-16 |CRAN (R 4.4.1) | +|later |1.4.2 |2025-04-08 |CRAN (R 4.4.1) | +|lifecycle |1.0.4 |2023-11-07 |CRAN (R 4.4.1) | +|magrittr |2.0.3 |2022-03-30 |CRAN (R 4.4.1) | +|memoise |2.0.1 |2021-11-26 |CRAN (R 4.4.0) | +|mime |0.13 |2025-03-17 |CRAN (R 4.4.1) | +|miniUI |0.1.2 |2025-04-17 |CRAN (R 4.4.1) | +|pillar |1.10.2 |2025-04-05 |CRAN (R 4.4.1) | +|pkgbuild |1.4.7 |2025-03-24 |CRAN (R 4.4.1) | +|pkgconfig |2.0.3 |2019-09-22 |CRAN (R 4.4.1) | +|pkgload |1.4.0 |2024-06-28 |CRAN (R 4.4.0) | +|profvis |0.4.0 |2024-09-20 |CRAN (R 4.4.1) | +|promises |1.3.2 |2024-11-28 |CRAN (R 4.4.1) | +|purrr |1.0.4 |2025-02-05 |CRAN (R 4.4.1) | +|R6 |2.6.1 |2025-02-15 |CRAN (R 4.4.1) | +|Rcpp |1.0.14 |2025-01-12 |CRAN (R 4.4.1) | +|readr |2.1.5 |2024-01-10 |CRAN (R 4.4.0) | +|remotes |2.5.0 |2024-03-17 |CRAN (R 4.4.1) | +|renv |1.1.4 |2025-03-20 |CRAN (R 4.4.1) | +|rlang |1.1.6 |2025-04-11 |CRAN (R 4.4.1) | +|rprojroot |2.0.4 |2023-11-05 |CRAN (R 4.4.1) | +|rsconnect |1.3.4 |2025-01-22 |CRAN (R 4.4.1) | +|rstudioapi |0.17.1 |2024-10-22 |CRAN (R 4.4.1) | +|sessioninfo |1.2.3 |2025-02-05 |CRAN (R 4.4.1) | +|shiny |1.10.0 |2024-12-14 |CRAN (R 4.4.1) | +|tibble |3.2.1 |2023-03-20 |CRAN (R 4.4.0) | +|tidyselect |1.2.1 |2024-03-11 |CRAN (R 4.4.0) | +|tzdb |0.5.0 |2025-03-15 |CRAN (R 4.4.1) | +|urlchecker |1.0.1 |2021-11-30 |CRAN (R 4.4.1) | +|usethis |3.1.0 |2024-11-26 |CRAN (R 4.4.1) | +|vctrs |0.6.5 |2023-12-01 |CRAN (R 4.4.0) | +|vroom |1.6.5 |2023-12-05 |CRAN (R 4.4.0) | +|withr |3.0.2 |2024-10-28 |CRAN (R 4.4.1) | +|xfun |0.52 |2025-04-02 |CRAN (R 4.4.1) | +|xtable |1.8-4 |2019-04-21 |CRAN (R 4.4.1) | diff --git a/inst/apps/FreesearchR/rsconnect/shinyapps.io/agdamsbo/FreesearchR.dcf b/inst/apps/FreesearchR/rsconnect/shinyapps.io/agdamsbo/FreesearchR.dcf index 23eef6a..89e5ac2 100644 --- a/inst/apps/FreesearchR/rsconnect/shinyapps.io/agdamsbo/FreesearchR.dcf +++ b/inst/apps/FreesearchR/rsconnect/shinyapps.io/agdamsbo/FreesearchR.dcf @@ -5,6 +5,6 @@ account: agdamsbo server: shinyapps.io hostUrl: https://api.shinyapps.io/v1 appId: 14600805 -bundleId: 10169595 +bundleId: 10169675 url: https://agdamsbo.shinyapps.io/FreesearchR/ version: 1 diff --git a/renv.lock b/renv.lock index 1a38674..5e58e95 100644 --- a/renv.lock +++ b/renv.lock @@ -1792,7 +1792,7 @@ }, "cli": { "Package": "cli", - "Version": "3.6.4", + "Version": "3.6.5", "Source": "Repository", "Title": "Helpers for Developing Command Line Interfaces", "Authors@R": "c( person(\"Gábor\", \"Csárdi\", , \"gabor@posit.co\", role = c(\"aut\", \"cre\")), person(\"Hadley\", \"Wickham\", role = \"ctb\"), person(\"Kirill\", \"Müller\", role = \"ctb\"), person(\"Salim\", \"Brüggemann\", , \"salim-b@pm.me\", role = \"ctb\", comment = c(ORCID = \"0000-0002-5329-5987\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",