andreas/FreesearchR
1
0
Fork 0
mirror of https://github.com/agdamsbo/FreesearchR.git synced 2026-06-19 12:37:30 +02:00
Code Issues Projects Releases Packages Wiki Activity

naming and dealing with a dependency issue. ready for first release

Browse source
This commit is contained in:
Andreas Gammelgaard Damsbo 2024-12-19 15:26:23 +01:00
commit a01f7157b5
No known key found for this signature in database
30 changed files with 664 additions and 1026 deletions
Download patch file Download diff file Expand all files Collapse all files

7
R/redcap_read_shiny_module.R
View file

@ -100,6 +100,7 @@ m_redcap_readUI <- function(id, include_title = TRUE) {
#'
#' @return shiny server module
#' @export
#' @importFrom REDCapCAST read_redcap_tables redcap_wider suffix2label
#'
m_redcap_readServer <- function(id, output.format = c("df", "teal", "list")) {
output.format <- match.arg(output.format)
@ -226,7 +227,7 @@ m_redcap_readServer <- function(id, output.format = c("df", "teal", "list")) {
shiny::req(input$fields)
record_id <- dd()[[1]][1]
redcap_data <- REDCapCAST::read_redcap_tables(
redcap_data <- read_redcap_tables(
uri = input$uri,
token = input$api,
fields = unique(c(record_id, input$fields)),
@ -235,10 +236,10 @@ m_redcap_readServer <- function(id, output.format = c("df", "teal", "list")) {
raw_or_label = "both",
filter_logic = input$filter
) |>
REDCapCAST::redcap_wider() |>
redcap_wider() |>
dplyr::select(-dplyr::ends_with("_complete")) |>
dplyr::select(-dplyr::any_of(record_id)) |>
REDCapCAST::suffix2label()
suffix2label()
out_object <- file_export(redcap_data,
output.format = output.format,