andreas/FreesearchR
1
0
Fork 0
mirror of https://github.com/agdamsbo/FreesearchR.git synced 2026-06-19 12:37:30 +02:00
Code Issues Projects Releases Packages Wiki Activity

updated data import
Some checks are pending
pkgdown.yaml / pkgdown (push) Waiting to run
Details

Browse source
This commit is contained in:
Andreas Gammelgaard Damsbo 2025-03-11 13:42:57 +01:00
commit 912fff7474
No known key found for this signature in database
32 changed files with 2340 additions and 273 deletions
Download patch file Download diff file Expand all files Collapse all files

1080
inst/apps/freesearcheR/app.R
View file

File diff suppressed because it is too large Load diff

2
inst/apps/freesearcheR/rsconnect/shinyapps.io/agdamsbo/freesearcheR.dcf
View file

@ -5,6 +5,6 @@ account: agdamsbo
server: shinyapps.io
hostUrl: https://api.shinyapps.io/v1
appId: 13611288
bundleId: 9899914
bundleId: 9925506
url: https://agdamsbo.shinyapps.io/freesearcheR/
version: 1

45
inst/apps/freesearcheR/server.R
View file

@ -94,19 +94,19 @@ server <- function(input, output, session) {
consider.na <- c("NA", "\"\"", "", "\'\'", "na")
data_file <- datamods::import_file_server(
data_file <- import_file_server(
id = "file_import",
show_data_in = "popup",
trigger_return = "change",
return_class = "data.frame",
read_fns = list(
ods = function(file) {
ods = function(file, which, skip, na) {
readODS::read_ods(
path = file,
# Sheet and skip not implemented for .ods in the original implementation
# sheet = sheet,
# skip = skip,
na = consider.na
sheet = which,
skip = skip,
na = na
)
},
dta = function(file) {
@ -115,29 +115,32 @@ server <- function(input, output, session) {
.name_repair = "unique_quiet"
)
},
csv = function(file) {
readr::read_csv(
# csv = function(file) {
# readr::read_csv(
# file = file,
# na = consider.na,
# name_repair = "unique_quiet"
# )
# },
csv = import_delim,
tsv = import_delim,
txt = import_delim,
xls = function(file, which, skip, na) {
openxlsx2::read_xlsx(
file = file,
na = consider.na,
name_repair = "unique_quiet"
sheet = which,
skip_empty_rows = TRUE,
start_row = skip - 1,
na.strings = na
)
},
xls = function(file) {
xlsx = function(file, which, skip, na) {
openxlsx2::read_xlsx(
file = file,
sheet = sheet,
skip_empty_rows = TRUE,
start_row = skip - 1,
na.strings = consider.na
)
},
xlsx = function(file) {
openxlsx2::read_xlsx(
file = file,
sheet = sheet,
skip_empty_rows = TRUE,
start_row = skip - 1,
na.strings = consider.na)
na.strings = na)
},
rds = function(file) {
readr::read_rds(
@ -304,7 +307,7 @@ server <- function(input, output, session) {
shiny::observeEvent(
input$modal_column,
datamods::modal_create_column(id = "modal_column")
datamods::modal_create_column(id = "modal_column",footer = "This is only for advanced users!")
)
data_modal_r <- datamods::create_column_server(
id = "modal_column",

48
inst/apps/freesearcheR/ui.R
View file

@ -46,9 +46,11 @@ ui_elements <- list(
shiny::br(),
shiny::conditionalPanel(
condition = "input.source=='file'",
datamods::import_file_ui("file_import",
import_file_ui(
id = "file_import",
layout_params = "dropdown",
title = "Choose a datafile to upload",
file_extensions = c(".csv", ".txt", ".xls", ".xlsx", ".rds", ".fst", ".sas7bdat", ".sav", ".ods", ".dta")
file_extensions = c(".csv", ".tsv", ".txt", ".xls", ".xlsx", ".rds", ".sas7bdat", ".ods", ".dta")
)
),
shiny::conditionalPanel(
@ -67,25 +69,27 @@ ui_elements <- list(
shiny::br(),
shiny::h5("Exclude in-complete variables"),
shiny::fluidRow(
shiny::column(width=6,
shiny::br(),
shiny::br(),
shiny::p("Filter incomplete variables, by setting a completeness threshold:"),
shiny::br()
),
shiny::column(width=6,
shinyWidgets::noUiSliderInput(
inputId = "complete_cutoff",
label = NULL,
min = 0,
max = 100,
step = 5,
value = 70,
format = shinyWidgets::wNumbFormat(decimals = 0),
color = datamods:::get_primary_color()
),
shiny::helpText("Include variables with completeness above the specified percentage.")
)
shiny::column(
width = 6,
shiny::br(),
shiny::br(),
shiny::p("Filter incomplete variables, by setting a completeness threshold:"),
shiny::br()
),
shiny::column(
width = 6,
shinyWidgets::noUiSliderInput(
inputId = "complete_cutoff",
label = NULL,
min = 0,
max = 100,
step = 5,
value = 70,
format = shinyWidgets::wNumbFormat(decimals = 0),
color = datamods:::get_primary_color()
),
shiny::helpText("Include variables with completeness above the specified percentage.")
)
),
shiny::br(),
shiny::br(),
@ -167,6 +171,8 @@ ui_elements <- list(
On the right, you can create and modify factor/categorical variables as well as create new variables with *R* code."))
)
),
shiny::tags$br(),
shiny::tags$br(),
fluidRow(
shiny::column(
width = 2