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moved app to correctly include in package and allow load with dataset

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Andreas Gammelgaard Damsbo 2024-11-21 12:34:27 +01:00
commit 8e73992b39
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32 changed files with 5561 additions and 273 deletions
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26
R/helpers.R
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@ -48,24 +48,6 @@ write_quarto <- function(data,fileformat,qmd.file=here::here("analyses.qmd"),fil
)
}
#' Helper to import files correctly
#'
#' @param filenames file names
#'
#' @return character vector
#' @export
#'
#' @examples
#' file_extension(list.files(here::here(""))[[2]])[[1]]
#' file_extension(c("file.cd..ks", "file"))
file_extension <- function(filenames) {
sub(
pattern = "^(.*\\.|[^.]+)(?=[^.]*)", replacement = "",
filenames,
perl = TRUE
)
}
#' Flexible file import based on extension
#'
#' @param file file name
@ -77,7 +59,7 @@ file_extension <- function(filenames) {
#' @examples
#' read_input("https://raw.githubusercontent.com/agdamsbo/cognitive.index.lookup/main/data/sample.csv")
read_input <- function(file, consider.na = c("NA", '""', "")) {
ext <- file_extension(file)
ext <- tools::file_ext(file)
if (ext == "csv") {
df <- readr::read_csv(file = file, na = consider.na)
@ -86,10 +68,12 @@ read_input <- function(file, consider.na = c("NA", '""', "")) {
} else if (ext == "dta") {
df <- haven::read_dta(file = file)
} else if (ext == "ods") {
df <- readODS::read_ods(file = file)
df <- readODS::read_ods(path = file)
} else if (ext == "rds") {
df <- readr::read_rds(file = file)
} else {
stop("Input file format has to be on of:
'.csv', '.xls', '.xlsx', '.dta' or '.ods'")
'.csv', '.xls', '.xlsx', '.dta', '.ods' or '.rds'")
}
df