From 8503118101252ead0deefd3281b04c0153837c4b Mon Sep 17 00:00:00 2001 From: agdamsbo <43278243+agdamsbo@users.noreply.github.com> Date: Tue, 13 May 2025 06:33:41 +0000 Subject: [PATCH] =?UTF-8?q?Deploying=20to=20gh-pages=20from=20@=20agdamsbo?= =?UTF-8?q?/FreesearchR@07797b2adf30074c9011f2a6fa3a67fcf13aa481=20?= =?UTF-8?q?=F0=9F=9A=80?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- pkgdown.yml | 2 +- reference/getfun.html | 2 +- reference/regression_table.html | 87 +-------------------------------- search.json | 2 +- 4 files changed, 4 insertions(+), 89 deletions(-) diff --git a/pkgdown.yml b/pkgdown.yml index 1abff31..02aa691 100644 --- a/pkgdown.yml +++ b/pkgdown.yml @@ -6,7 +6,7 @@ articles: FreesearchR: FreesearchR.html session: session.html visuals: visuals.html -last_built: 2025-05-12T12:15Z +last_built: 2025-05-13T06:32Z urls: reference: https://agdamsbo.github.io/FreesearchR/reference article: https://agdamsbo.github.io/FreesearchR/articles diff --git a/reference/getfun.html b/reference/getfun.html index 8155f23..39a3348 100644 --- a/reference/getfun.html +++ b/reference/getfun.html @@ -138,7 +138,7 @@ #> z$qr <- NULL #> z #> } -#> <bytecode: 0x55771ca00460> +#> <bytecode: 0x55fda49cbf60> #> <environment: namespace:stats> diff --git a/reference/regression_table.html b/reference/regression_table.html index 488c7ab..08d5918 100644 --- a/reference/regression_table.html +++ b/reference/regression_table.html @@ -77,92 +77,7 @@
if (FALSE) { # \dontrun{
-tbl <- gtsummary::trial |>
- regression_model(
- outcome.str = "stage",
- fun = "MASS::polr"
- ) |>
- regression_table(args.list = list("exponentiate" = TRUE))
-gtsummary::trial |>
- regression_model(
- outcome.str = "age",
- fun = "stats::lm",
- formula.str = "{outcome.str}~.",
- args.list = NULL
- ) |>
- regression_table() |>
- plot()
-gtsummary::trial |>
- regression_model(
- outcome.str = "trt",
- fun = "stats::glm",
- args.list = list(family = binomial(link = "logit"))
- ) |>
- regression_table()
-gtsummary::trial |>
- regression_model_uv(
- outcome.str = "trt",
- fun = "stats::glm",
- args.list = list(family = stats::binomial(link = "logit"))
- ) |>
- regression_table()
-gtsummary::trial |>
- regression_model_uv(
- outcome.str = "stage",
- args.list = list(family = stats::binomial(link = "logit"))
- ) |>
- regression_table()
-
-list(
- "Univariable" = regression_model_uv,
- "Multivariable" = regression_model
-) |>
- lapply(\(.fun){
- do.call(
- .fun,
- c(
- list(data = gtsummary::trial),
- list(outcome.str = "stage")
- )
- )
- }) |>
- purrr::map(regression_table) |>
- tbl_merge()
-} # }
-regression_table <- function(x, ...) {
- UseMethod("regression_table")
-}
-
-#' @rdname regression_table
-#' @export
-regression_table.list <- function(x, ...) {
- x |>
- purrr::map(\(.m){
- regression_table(x = .m, ...) |>
- gtsummary::add_n()
- }) |>
- gtsummary::tbl_stack()
-}
-
-#' @rdname regression_table
-#' @export
-regression_table.default <- function(x, ..., args.list = NULL, fun = "gtsummary::tbl_regression") {
- # Stripping custom class
- class(x) <- class(x)[class(x) != "freesearchr_model"]
-
- if (any(c(length(class(x)) != 1, class(x) != "lm"))) {
- if (!"exponentiate" %in% names(args.list)) {
- args.list <- c(args.list, list(exponentiate = TRUE))
- }
- }
-
- out <- do.call(getfun(fun), c(list(x = x), args.list))
- out |>
- gtsummary::add_glance_source_note() # |>
- # gtsummary::bold_p()
-}
-