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Andreas Gammelgaard Damsbo 2025-08-27 12:46:44 +02:00
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2
CITATION.cff
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@ -9,7 +9,7 @@ type: software
license: AGPL-3.0-or-later license: AGPL-3.0-or-later
title: 'FreesearchR: A free and open-source browser based data analysis tool for researchers title: 'FreesearchR: A free and open-source browser based data analysis tool for researchers
with publication ready output' with publication ready output'
version: 25.8.1 version: 25.8.2
doi: 10.5281/zenodo.14527429 doi: 10.5281/zenodo.14527429
identifiers: identifiers:
- type: url - type: url

2
DESCRIPTION
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@ -1,6 +1,6 @@
Package: FreesearchR Package: FreesearchR
Title: A free and open-source browser based data analysis tool for researchers with publication ready output Title: A free and open-source browser based data analysis tool for researchers with publication ready output
Version: 25.8.1 Version: 25.8.2
Authors@R: c( Authors@R: c(
person("Andreas Gammelgaard", "Damsbo",email="agdamsbo@clin.au.dk", role = c("aut", "cre"), person("Andreas Gammelgaard", "Damsbo",email="agdamsbo@clin.au.dk", role = c("aut", "cre"),
comment = c(ORCID = "0000-0002-7559-1154")), comment = c(ORCID = "0000-0002-7559-1154")),

2
R/app_version.R
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@ -1 +1 @@
app_version <- function()'25.8.1' app_version <- function()'25.8.2'

2
R/hosted_version.R
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@ -1 +1 @@
hosted_version <- function()'v25.8.1-250827' hosted_version <- function()'v25.8.2-250827'

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R/sysdata.rda
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20
SESSION.md
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@ -15,7 +15,7 @@
|rstudio |2025.05.0+496 Mariposa Orchid (desktop) | |rstudio |2025.05.0+496 Mariposa Orchid (desktop) |
|pandoc |3.6.4 @ /opt/homebrew/bin/ (via rmarkdown) | |pandoc |3.6.4 @ /opt/homebrew/bin/ (via rmarkdown) |
|quarto |1.7.30 @ /usr/local/bin/quarto | |quarto |1.7.30 @ /usr/local/bin/quarto |
|FreesearchR |25.8.1.250827 | |FreesearchR |25.8.2.250827 |
-------------------------------------------------------------------------------- --------------------------------------------------------------------------------
@ -26,6 +26,8 @@
|apexcharter |0.4.4 |2024-09-06 |CRAN (R 4.4.1) | |apexcharter |0.4.4 |2024-09-06 |CRAN (R 4.4.1) |
|askpass |1.2.1 |2024-10-04 |CRAN (R 4.4.1) | |askpass |1.2.1 |2024-10-04 |CRAN (R 4.4.1) |
|assertthat |0.2.1 |2019-03-21 |CRAN (R 4.4.1) | |assertthat |0.2.1 |2019-03-21 |CRAN (R 4.4.1) |
|attachment |0.4.5 |2025-03-14 |CRAN (R 4.4.1) |
|attempt |0.3.1 |2020-05-03 |CRAN (R 4.4.1) |
|backports |1.5.0 |2024-05-23 |CRAN (R 4.4.1) | |backports |1.5.0 |2024-05-23 |CRAN (R 4.4.1) |
|base64enc |0.1-3 |2015-07-28 |CRAN (R 4.4.1) | |base64enc |0.1-3 |2015-07-28 |CRAN (R 4.4.1) |
|bayestestR |0.16.1 |2025-07-01 |CRAN (R 4.4.1) | |bayestestR |0.16.1 |2025-07-01 |CRAN (R 4.4.1) |
@ -43,6 +45,7 @@
|cardx |0.2.5 |2025-07-03 |CRAN (R 4.4.1) | |cardx |0.2.5 |2025-07-03 |CRAN (R 4.4.1) |
|caTools |1.18.3 |2024-09-04 |CRAN (R 4.4.1) | |caTools |1.18.3 |2024-09-04 |CRAN (R 4.4.1) |
|cellranger |1.1.0 |2016-07-27 |CRAN (R 4.4.0) | |cellranger |1.1.0 |2016-07-27 |CRAN (R 4.4.0) |
|cffr |1.2.0 |2025-01-25 |CRAN (R 4.4.1) |
|checkmate |2.3.2 |2024-07-29 |CRAN (R 4.4.0) | |checkmate |2.3.2 |2024-07-29 |CRAN (R 4.4.0) |
|class |7.3-23 |2025-01-01 |CRAN (R 4.4.1) | |class |7.3-23 |2025-01-01 |CRAN (R 4.4.1) |
|classInt |0.4-11 |2025-01-08 |CRAN (R 4.4.1) | |classInt |0.4-11 |2025-01-08 |CRAN (R 4.4.1) |
@ -52,6 +55,8 @@
|colorspace |2.1-1 |2024-07-26 |CRAN (R 4.4.1) | |colorspace |2.1-1 |2024-07-26 |CRAN (R 4.4.1) |
|commonmark |2.0.0 |2025-07-07 |CRAN (R 4.4.1) | |commonmark |2.0.0 |2025-07-07 |CRAN (R 4.4.1) |
|crayon |1.5.3 |2024-06-20 |CRAN (R 4.4.1) | |crayon |1.5.3 |2024-06-20 |CRAN (R 4.4.1) |
|credentials |2.0.2 |2024-10-04 |CRAN (R 4.4.1) |
|curl |6.4.0 |2025-06-22 |CRAN (R 4.4.1) |
|data.table |1.17.8 |2025-07-10 |CRAN (R 4.4.1) | |data.table |1.17.8 |2025-07-10 |CRAN (R 4.4.1) |
|datamods |1.5.3 |2024-10-02 |CRAN (R 4.4.1) | |datamods |1.5.3 |2024-10-02 |CRAN (R 4.4.1) |
|datawizard |1.2.0 |2025-07-17 |CRAN (R 4.4.1) | |datawizard |1.2.0 |2025-07-17 |CRAN (R 4.4.1) |
@ -60,6 +65,7 @@
|devtools |2.4.5 |2022-10-11 |CRAN (R 4.4.0) | |devtools |2.4.5 |2022-10-11 |CRAN (R 4.4.0) |
|DHARMa |0.4.7 |2024-10-18 |CRAN (R 4.4.1) | |DHARMa |0.4.7 |2024-10-18 |CRAN (R 4.4.1) |
|digest |0.6.37 |2024-08-19 |CRAN (R 4.4.1) | |digest |0.6.37 |2024-08-19 |CRAN (R 4.4.1) |
|dockerfiler |0.2.5 |2025-05-07 |CRAN (R 4.4.1) |
|doParallel |1.0.17 |2022-02-07 |CRAN (R 4.4.0) | |doParallel |1.0.17 |2022-02-07 |CRAN (R 4.4.0) |
|dplyr |1.1.4 |2023-11-17 |CRAN (R 4.4.0) | |dplyr |1.1.4 |2023-11-17 |CRAN (R 4.4.0) |
|DT |0.33 |2024-04-04 |CRAN (R 4.4.0) | |DT |0.33 |2024-04-04 |CRAN (R 4.4.0) |
@ -82,16 +88,19 @@
|foreach |1.5.2 |2022-02-02 |CRAN (R 4.4.0) | |foreach |1.5.2 |2022-02-02 |CRAN (R 4.4.0) |
|foreign |0.8-90 |2025-03-31 |CRAN (R 4.4.1) | |foreign |0.8-90 |2025-03-31 |CRAN (R 4.4.1) |
|Formula |1.2-5 |2023-02-24 |CRAN (R 4.4.1) | |Formula |1.2-5 |2023-02-24 |CRAN (R 4.4.1) |
|FreesearchR |25.8.1 |NA |NA | |FreesearchR |25.8.2 |NA |NA |
|fs |1.6.6 |2025-04-12 |CRAN (R 4.4.1) | |fs |1.6.6 |2025-04-12 |CRAN (R 4.4.1) |
|gdtools |0.4.2 |2025-03-27 |CRAN (R 4.4.1) | |gdtools |0.4.2 |2025-03-27 |CRAN (R 4.4.1) |
|generics |0.1.4 |2025-05-09 |CRAN (R 4.4.1) | |generics |0.1.4 |2025-05-09 |CRAN (R 4.4.1) |
|gert |2.1.5 |2025-03-25 |CRAN (R 4.4.1) |
|ggalluvial |0.12.5 |2023-02-22 |CRAN (R 4.4.0) | |ggalluvial |0.12.5 |2023-02-22 |CRAN (R 4.4.0) |
|ggcorrplot |0.1.4.1 |2023-09-05 |CRAN (R 4.4.0) | |ggcorrplot |0.1.4.1 |2023-09-05 |CRAN (R 4.4.0) |
|ggforce |0.5.0 |2025-06-18 |CRAN (R 4.4.1) | |ggforce |0.5.0 |2025-06-18 |CRAN (R 4.4.1) |
|ggplot2 |3.5.2 |2025-04-09 |CRAN (R 4.4.1) | |ggplot2 |3.5.2 |2025-04-09 |CRAN (R 4.4.1) |
|ggridges |0.5.6 |2024-01-23 |CRAN (R 4.4.0) | |ggridges |0.5.6 |2024-01-23 |CRAN (R 4.4.0) |
|ggstats |0.10.0 |2025-07-02 |CRAN (R 4.4.1) | |ggstats |0.10.0 |2025-07-02 |CRAN (R 4.4.1) |
|gh |1.5.0 |2025-05-26 |CRAN (R 4.4.1) |
|gitcreds |0.1.2 |2022-09-08 |CRAN (R 4.4.1) |
|glue |1.8.0 |2024-09-30 |CRAN (R 4.4.1) | |glue |1.8.0 |2024-09-30 |CRAN (R 4.4.1) |
|gridExtra |2.3 |2017-09-09 |CRAN (R 4.4.1) | |gridExtra |2.3 |2017-09-09 |CRAN (R 4.4.1) |
|gt |1.0.0 |2025-04-05 |CRAN (R 4.4.1) | |gt |1.0.0 |2025-04-05 |CRAN (R 4.4.1) |
@ -105,11 +114,13 @@
|htmltools |0.5.8.1 |2024-04-04 |CRAN (R 4.4.1) | |htmltools |0.5.8.1 |2024-04-04 |CRAN (R 4.4.1) |
|htmlwidgets |1.6.4 |2023-12-06 |CRAN (R 4.4.0) | |htmlwidgets |1.6.4 |2023-12-06 |CRAN (R 4.4.0) |
|httpuv |1.6.16 |2025-04-16 |CRAN (R 4.4.1) | |httpuv |1.6.16 |2025-04-16 |CRAN (R 4.4.1) |
|httr2 |1.2.1 |2025-07-22 |CRAN (R 4.4.1) |
|IDEAFilter |0.2.1 |2025-07-29 |CRAN (R 4.4.1) | |IDEAFilter |0.2.1 |2025-07-29 |CRAN (R 4.4.1) |
|insight |1.4.0 |2025-08-18 |CRAN (R 4.4.1) | |insight |1.4.0 |2025-08-18 |CRAN (R 4.4.1) |
|iterators |1.0.14 |2022-02-05 |CRAN (R 4.4.1) | |iterators |1.0.14 |2022-02-05 |CRAN (R 4.4.1) |
|jquerylib |0.1.4 |2021-04-26 |CRAN (R 4.4.0) | |jquerylib |0.1.4 |2021-04-26 |CRAN (R 4.4.0) |
|jsonlite |2.0.0 |2025-03-27 |CRAN (R 4.4.1) | |jsonlite |2.0.0 |2025-03-27 |CRAN (R 4.4.1) |
|jsonvalidate |1.5.0 |2025-02-07 |CRAN (R 4.4.1) |
|KernSmooth |2.23-26 |2025-01-01 |CRAN (R 4.4.1) | |KernSmooth |2.23-26 |2025-01-01 |CRAN (R 4.4.1) |
|keyring |1.4.1 |2025-06-15 |CRAN (R 4.4.1) | |keyring |1.4.1 |2025-06-15 |CRAN (R 4.4.1) |
|knitr |1.50 |2025-03-16 |CRAN (R 4.4.1) | |knitr |1.50 |2025-03-16 |CRAN (R 4.4.1) |
@ -161,6 +172,7 @@
|R6 |2.6.1 |2025-02-15 |CRAN (R 4.4.1) | |R6 |2.6.1 |2025-02-15 |CRAN (R 4.4.1) |
|ragg |1.4.0 |2025-04-10 |CRAN (R 4.4.1) | |ragg |1.4.0 |2025-04-10 |CRAN (R 4.4.1) |
|rankinPlot |1.1.0 |2023-01-30 |CRAN (R 4.4.0) | |rankinPlot |1.1.0 |2023-01-30 |CRAN (R 4.4.0) |
|rappdirs |0.3.3 |2021-01-31 |CRAN (R 4.4.1) |
|rbibutils |2.3 |2024-10-04 |CRAN (R 4.4.1) | |rbibutils |2.3 |2024-10-04 |CRAN (R 4.4.1) |
|RColorBrewer |1.1-3 |2022-04-03 |CRAN (R 4.4.1) | |RColorBrewer |1.1-3 |2022-04-03 |CRAN (R 4.4.1) |
|Rcpp |1.1.0 |2025-07-02 |CRAN (R 4.4.1) | |Rcpp |1.1.0 |2025-07-02 |CRAN (R 4.4.1) |
@ -192,12 +204,14 @@
|sessioninfo |1.2.3 |2025-02-05 |CRAN (R 4.4.1) | |sessioninfo |1.2.3 |2025-02-05 |CRAN (R 4.4.1) |
|shiny |1.11.1 |2025-07-03 |CRAN (R 4.4.1) | |shiny |1.11.1 |2025-07-03 |CRAN (R 4.4.1) |
|shiny.i18n |0.3.0 |NA |NA | |shiny.i18n |0.3.0 |NA |NA |
|shiny2docker |0.0.3 |2025-06-28 |CRAN (R 4.4.1) |
|shinybusy |0.3.3 |2024-03-09 |CRAN (R 4.4.0) | |shinybusy |0.3.3 |2024-03-09 |CRAN (R 4.4.0) |
|shinyjs |2.1.0 |2021-12-23 |CRAN (R 4.4.0) | |shinyjs |2.1.0 |2021-12-23 |CRAN (R 4.4.0) |
|shinyTime |1.0.3 |2022-08-19 |CRAN (R 4.4.0) | |shinyTime |1.0.3 |2022-08-19 |CRAN (R 4.4.0) |
|shinyWidgets |0.9.0 |2025-02-21 |CRAN (R 4.4.1) | |shinyWidgets |0.9.0 |2025-02-21 |CRAN (R 4.4.1) |
|stringi |1.8.7 |2025-03-27 |CRAN (R 4.4.1) | |stringi |1.8.7 |2025-03-27 |CRAN (R 4.4.1) |
|stringr |1.5.1 |2023-11-14 |CRAN (R 4.4.0) | |stringr |1.5.1 |2023-11-14 |CRAN (R 4.4.0) |
|sys |3.4.3 |2024-10-04 |CRAN (R 4.4.1) |
|systemfonts |1.2.3 |2025-04-30 |CRAN (R 4.4.1) | |systemfonts |1.2.3 |2025-04-30 |CRAN (R 4.4.1) |
|testthat |3.2.3 |2025-01-13 |CRAN (R 4.4.1) | |testthat |3.2.3 |2025-01-13 |CRAN (R 4.4.1) |
|textshaping |1.0.1 |2025-05-01 |CRAN (R 4.4.1) | |textshaping |1.0.1 |2025-05-01 |CRAN (R 4.4.1) |
@ -213,6 +227,7 @@
|urlchecker |1.0.1 |2021-11-30 |CRAN (R 4.4.1) | |urlchecker |1.0.1 |2021-11-30 |CRAN (R 4.4.1) |
|usethis |3.1.0 |2024-11-26 |CRAN (R 4.4.1) | |usethis |3.1.0 |2024-11-26 |CRAN (R 4.4.1) |
|uuid |1.2-1 |2024-07-29 |CRAN (R 4.4.1) | |uuid |1.2-1 |2024-07-29 |CRAN (R 4.4.1) |
|V8 |6.0.6 |2025-08-18 |CRAN (R 4.4.1) |
|vctrs |0.6.5 |2023-12-01 |CRAN (R 4.4.0) | |vctrs |0.6.5 |2023-12-01 |CRAN (R 4.4.0) |
|vroom |1.6.5 |2023-12-05 |CRAN (R 4.4.0) | |vroom |1.6.5 |2023-12-05 |CRAN (R 4.4.0) |
|withr |3.0.2 |2024-10-28 |CRAN (R 4.4.1) | |withr |3.0.2 |2024-10-28 |CRAN (R 4.4.1) |
@ -221,4 +236,5 @@
|xml2 |1.3.8 |2025-03-14 |CRAN (R 4.4.1) | |xml2 |1.3.8 |2025-03-14 |CRAN (R 4.4.1) |
|xtable |1.8-4 |2019-04-21 |CRAN (R 4.4.1) | |xtable |1.8-4 |2019-04-21 |CRAN (R 4.4.1) |
|yaml |2.3.10 |2024-07-26 |CRAN (R 4.4.1) | |yaml |2.3.10 |2024-07-26 |CRAN (R 4.4.1) |
|yesno |0.1.3 |2024-07-26 |CRAN (R 4.4.1) |
|zip |2.3.3 |2025-05-13 |CRAN (R 4.4.1) | |zip |2.3.3 |2025-05-13 |CRAN (R 4.4.1) |

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app_docker/app.R
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@ -49,7 +49,7 @@ library(rlang)
#### Current file: /Users/au301842/FreesearchR/R//app_version.R #### Current file: /Users/au301842/FreesearchR/R//app_version.R
######## ########
app_version <- function()'25.8.1' app_version <- function()'25.8.2'
######## ########
@ -4047,7 +4047,7 @@ simple_snake <- function(data){
#### Current file: /Users/au301842/FreesearchR/R//hosted_version.R #### Current file: /Users/au301842/FreesearchR/R//hosted_version.R
######## ########
hosted_version <- function()'v25.8.1-250827' hosted_version <- function()'v25.8.2-250827'
######## ########