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<!DOCTYPE html>
<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>Questions and answers • freesearcheR</title><script src="deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="deps/Montserrat-0.4.9/font.css" rel="stylesheet"><link href="deps/Public_Sans-0.4.9/font.css" rel="stylesheet"><link href="deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet"><link href="deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet"><script src="deps/headroom-0.11.0/headroom.min.js"></script><script src="deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="deps/search-1.0.0/fuse.min.js"></script><script src="deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="pkgdown.js"></script><link href="extra.css" rel="stylesheet"><meta property="og:title" content="Questions and answers"></head><body>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">25.2.1</small>
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<h1>Questions and answers</h1>
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/freesearcheR/blob/main/QA.md" class="external-link"><code>QA.md</code></a></small>
</div>
<div id="questions-and-answers" class="section level1">
<p>A complete instructions set is not available, but below are a collection of questions and answers about the project and use of the app.</p>
<div class="section level2">
<h2 id="are-you-keeping-the-uploaded-data">Are you keeping the uploaded data?<a class="anchor" aria-label="anchor" href="#are-you-keeping-the-uploaded-data"></a></h2>
<p>No! All uploaded data is deleted when the session ends, so only stored for your analyses and the immediately deleted.</p>
</div>
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<footer><div class="pkgdown-footer-left">
<p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.1.1.</p>
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<p>Developed by Andreas Gammelgaard Damsbo. Provided without <strong>any warranty</strong>.</p>
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ROADMAP.html
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<div id="navbar" class="collapse navbar-collapse ms-3"> <div id="navbar" class="collapse navbar-collapse ms-3">
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@ -54,16 +55,15 @@
<ul class="task-list"><li><p><label><input type="checkbox">Theming output tables</label></p></li> <ul class="task-list"><li><p><label><input type="checkbox">Theming output tables</label></p></li>
<li><p><label><input type="checkbox">Select analyses to include in report</label></p></li> <li><p><label><input type="checkbox">Select analyses to include in report</label></p></li>
</ul></li> </ul></li>
<li><p><label><input type="checkbox">Plot regression analyses results</label></p></li>
<li><p><label><input type="checkbox" checked>Export modified data. 2025-01-16</label></p></li> <li><p><label><input type="checkbox" checked>Export modified data. 2025-01-16</label></p></li>
<li><p><label><input type="checkbox">Include reproducible code for all steps</label></p></li> <li><p><label><input type="checkbox">Include reproducible code for all steps (maybe not all, but most steps, and the final dataset can be exported)</label></p></li>
<li><p><label><input type="checkbox" checked><del>Modify factor levels</del> Factor level modifications is possible through converting factors to numeric &gt; cutting numeric with desired fixed values. 2024-12-12</label></p></li> <li><p><label><input type="checkbox" checked><del>Modify factor levels</del> Factor level modifications is possible through converting factors to numeric &gt; cutting numeric with desired fixed values. 2024-12-12</label></p></li>
<li><p><label><input type="checkbox" checked>More options for date/datetime/time grouping/factoring. Included weekday and month-only options. 2024-12-12</label></p></li> <li><p><label><input type="checkbox" checked>More options for date/datetime/time grouping/factoring. Included weekday and month-only options. 2024-12-12</label></p></li>
<li> <li>
<p>Graphs and plots</p> <p>Graphs and plots</p>
<ul class="task-list"><li><p><label><input type="checkbox">Correlation matrix plot for data exploration</label></p></li> <ul class="task-list"><li><p><label><input type="checkbox" checked>Correlation matrix plot for data exploration 2025-2-20</label></p></li>
<li><p><label><input type="checkbox">Grotta bars for ordianl outcomes</label></p></li> <li><p><label><input type="checkbox">Grotta bars for ordianl outcomes</label></p></li>
<li><p><label><input type="checkbox">Coefficient plotting for regression analyses (forest plot)</label></p></li> <li><p><label><input type="checkbox" checked>Coefficient plotting for regression analyses (forest plot) 2025-2-20</label></p></li>
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news/index.html
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<div id="navbar" class="collapse navbar-collapse ms-3"> <div id="navbar" class="collapse navbar-collapse ms-3">
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@ -37,7 +38,16 @@
<h2 class="pkg-version" data-toc-text="25.2.1" id="freesearcher-2521">freesearcheR 25.2.1<a class="anchor" aria-label="anchor" href="#freesearcher-2521"></a></h2> <h2 class="pkg-version" data-toc-text="25.2.1" id="freesearcher-2521">freesearcheR 25.2.1<a class="anchor" aria-label="anchor" href="#freesearcher-2521"></a></h2>
<p>First steps towards a more focused and simplified interface.</p> <p>First steps towards a more focused and simplified interface.</p>
<p>Focus will be on ease of use, handling basic functionality for data inspection and descriptive analyses.</p> <p>Focus will be on ease of use, handling basic functionality for data inspection and descriptive analyses.</p>
</div> <p>Inspired by the Stroke Center implementation guidelines of the WSO, we will apply a similar approach to this project in order to keep the interface simple and robust. Basic functions for descriptive analyses and data browsing are the basics. More advanced features like regression analyses are added for learning purposes, but really should be done by one self in software like <em>R</em> to ensure learning and reproducibility.</p>
<p>Teal dependencies removed. The teal framework really seems very powerful and promising, but it will also mean less control and more clutter. May come up again later.</p>
<p>All main components have been implemented.</p>
<p>Next steps are:</p>
<ul><li><p>Polished code export</p></li>
<li><p>Improved workflow and thorough step-wise guide/documentation</p></li>
<li><p>Implement in clinical projects</p></li>
<li><p>Implement in data analysis courses</p></li>
<li><p>Extensive testing and bug squashing</p></li>
</ul></div>
<div class="section level2"> <div class="section level2">
<h2 class="pkg-version" data-toc-text="25.1.1" id="freesearcher-2511">freesearcheR 25.1.1<a class="anchor" aria-label="anchor" href="#freesearcher-2511"></a></h2> <h2 class="pkg-version" data-toc-text="25.1.1" id="freesearcher-2511">freesearcheR 25.1.1<a class="anchor" aria-label="anchor" href="#freesearcher-2511"></a></h2>
<ul><li><p>UI tweaks.</p></li> <ul><li><p>UI tweaks.</p></li>

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pkgdown.yml
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@ -2,7 +2,7 @@ pandoc: 3.1.11
pkgdown: 2.1.1 pkgdown: 2.1.1
pkgdown_sha: ~ pkgdown_sha: ~
articles: {} articles: {}
last_built: 2025-02-19T12:39Z last_built: 2025-02-25T09:08Z
urls: urls:
reference: https://agdamsbo.github.io/freesearcheR/reference reference: https://agdamsbo.github.io/freesearcheR/reference
article: https://agdamsbo.github.io/freesearcheR/articles article: https://agdamsbo.github.io/freesearcheR/articles

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@ -17,6 +17,7 @@
<div id="navbar" class="collapse navbar-collapse ms-3"> <div id="navbar" class="collapse navbar-collapse ms-3">
<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li> <ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
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@ -17,6 +17,7 @@
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<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li> <ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
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@ -17,6 +17,7 @@
<div id="navbar" class="collapse navbar-collapse ms-3"> <div id="navbar" class="collapse navbar-collapse ms-3">
<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li> <ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
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@ -17,6 +17,7 @@
<div id="navbar" class="collapse navbar-collapse ms-3"> <div id="navbar" class="collapse navbar-collapse ms-3">
<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li> <ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
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</ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search"> </ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search">
<input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li> <input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li>

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reference/cut-variable.html
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@ -17,6 +17,7 @@
<div id="navbar" class="collapse navbar-collapse ms-3"> <div id="navbar" class="collapse navbar-collapse ms-3">
<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li> <ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
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reference/cut.html
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@ -17,6 +17,7 @@
<div id="navbar" class="collapse navbar-collapse ms-3"> <div id="navbar" class="collapse navbar-collapse ms-3">
<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li> <ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
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@ -17,6 +17,7 @@
<div id="navbar" class="collapse navbar-collapse ms-3"> <div id="navbar" class="collapse navbar-collapse ms-3">
<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li> <ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
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</ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search"> </ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search">
<input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li> <input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li>

1
reference/data-summary.html
View file

@ -17,6 +17,7 @@
<div id="navbar" class="collapse navbar-collapse ms-3"> <div id="navbar" class="collapse navbar-collapse ms-3">
<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li> <ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
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</ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search"> </ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search">
<input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li> <input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li>

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reference/default_format_arguments.html
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@ -17,6 +17,7 @@
<div id="navbar" class="collapse navbar-collapse ms-3"> <div id="navbar" class="collapse navbar-collapse ms-3">
<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li> <ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
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1
reference/default_parsing.html
View file

@ -17,6 +17,7 @@
<div id="navbar" class="collapse navbar-collapse ms-3"> <div id="navbar" class="collapse navbar-collapse ms-3">
<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li> <ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
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</ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search"> </ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search">
<input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li> <input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li>

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reference/factorize.html
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@ -17,6 +17,7 @@
<div id="navbar" class="collapse navbar-collapse ms-3"> <div id="navbar" class="collapse navbar-collapse ms-3">
<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li> <ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
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</ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search"> </ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search">
<input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li> <input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li>

1
reference/file_export.html
View file

@ -17,6 +17,7 @@
<div id="navbar" class="collapse navbar-collapse ms-3"> <div id="navbar" class="collapse navbar-collapse ms-3">
<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li> <ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
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</ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search"> </ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search">
<input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li> <input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li>

1
reference/format_writer.html
View file

@ -17,6 +17,7 @@
<div id="navbar" class="collapse navbar-collapse ms-3"> <div id="navbar" class="collapse navbar-collapse ms-3">
<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li> <ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
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</ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search"> </ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search">
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1
reference/get_fun_options.html
View file

@ -17,6 +17,7 @@
<div id="navbar" class="collapse navbar-collapse ms-3"> <div id="navbar" class="collapse navbar-collapse ms-3">
<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li> <ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
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</ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search"> </ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search">
<input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li> <input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li>

3
reference/getfun.html
View file

@ -17,6 +17,7 @@
<div id="navbar" class="collapse navbar-collapse ms-3"> <div id="navbar" class="collapse navbar-collapse ms-3">
<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li> <ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
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</ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search"> </ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search">
<input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li> <input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li>
@ -131,7 +132,7 @@
<span class="r-out co"><span class="r-pr">#&gt;</span> z$qr &lt;- NULL</span> <span class="r-out co"><span class="r-pr">#&gt;</span> z$qr &lt;- NULL</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> z</span> <span class="r-out co"><span class="r-pr">#&gt;</span> z</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> }</span> <span class="r-out co"><span class="r-pr">#&gt;</span> }</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> &lt;bytecode: 0x55c682a23c78&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> &lt;bytecode: 0x559a800e3518&gt;</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> &lt;environment: namespace:stats&gt;</span> <span class="r-out co"><span class="r-pr">#&gt;</span> &lt;environment: namespace:stats&gt;</span>
</code></pre></div> </code></pre></div>
</div> </div>

1
reference/gg_theme_export.html
View file

@ -17,6 +17,7 @@
<div id="navbar" class="collapse navbar-collapse ms-3"> <div id="navbar" class="collapse navbar-collapse ms-3">
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@ -21,6 +21,7 @@ Test app for the redcap_read_shiny_module"></head><body>
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@ -17,6 +17,7 @@
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@ -17,6 +17,7 @@
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@ -17,6 +17,7 @@
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@ -17,6 +17,7 @@
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@ -17,6 +17,7 @@
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@ -19,6 +19,7 @@ unique for each element on list.'></head><body>
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@ -19,6 +19,7 @@ spanner names."></head><body>
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@ -17,6 +17,7 @@
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