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SESSION.html
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SESSION.html
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<table class="table"><colgroup><col width="100%"></colgroup><thead><tr class="header"><th>——————————– R environment ———————————</th>
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</tr></thead><tbody><tr class="odd"><td>|setting |value | |:———–|:——————————————| |version |R version 4.4.1 (2024-06-14) | |os |macOS 15.3.1 | |system |aarch64, darwin20 | |ui |RStudio | |language |(EN) | |collate |en_US.UTF-8 | |ctype |en_US.UTF-8 | |tz |Europe/Copenhagen | |date |2025-07-03 | |rstudio |2025.05.0+496 Mariposa Orchid (desktop) | |pandoc |3.6.4 @ /opt/homebrew/bin/ (via rmarkdown) | |quarto |1.7.30 @ /usr/local/bin/quarto | |FreesearchR |25.7.2.250703 |</td>
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</tr></thead><tbody><tr class="odd"><td>|setting |value | |:———–|:——————————————| |version |R version 4.4.1 (2024-06-14) | |os |macOS 15.3.1 | |system |aarch64, darwin20 | |ui |RStudio | |language |(EN) | |collate |en_US.UTF-8 | |ctype |en_US.UTF-8 | |tz |Europe/Copenhagen | |date |2025-07-22 | |rstudio |2025.05.0+496 Mariposa Orchid (desktop) | |pandoc |3.6.4 @ /opt/homebrew/bin/ (via rmarkdown) | |quarto |1.7.30 @ /usr/local/bin/quarto | |FreesearchR |25.7.2.250722 |</td>
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</tr></tbody></table><div class="section level2">
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<h2 id="id_-packages-">———————————– packages ———————————–<a class="anchor" aria-label="anchor" href="#id_-packages-"></a></h2>
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<table class="table"><thead><tr class="header"><th align="left">package</th>
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@ -62,14 +62,6 @@
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<td align="left">0.2.1</td>
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<td align="left">2019-03-21</td>
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<td align="left">CRAN (R 4.4.1)</td>
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</tr><tr class="even"><td align="left">attachment</td>
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<td align="left">0.4.5</td>
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<td align="left">2025-03-14</td>
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<td align="left">CRAN (R 4.4.1)</td>
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</tr><tr class="odd"><td align="left">attempt</td>
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<td align="left">0.3.1</td>
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<td align="left">2020-05-03</td>
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<td align="left">CRAN (R 4.4.1)</td>
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</tr><tr class="even"><td align="left">backports</td>
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<td align="left">1.5.0</td>
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<td align="left">2024-05-23</td>
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@ -79,8 +71,8 @@
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<td align="left">2015-07-28</td>
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<td align="left">CRAN (R 4.4.1)</td>
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</tr><tr class="even"><td align="left">bayestestR</td>
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<td align="left">0.15.3</td>
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<td align="left">2025-04-28</td>
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<td align="left">0.16.1</td>
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<td align="left">2025-07-01</td>
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<td align="left">CRAN (R 4.4.1)</td>
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</tr><tr class="odd"><td align="left">bit</td>
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<td align="left">4.6.0</td>
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@ -123,12 +115,12 @@
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<td align="left">2024-05-16</td>
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<td align="left">CRAN (R 4.4.1)</td>
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</tr><tr class="odd"><td align="left">cards</td>
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<td align="left">0.6.0</td>
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<td align="left">2025-04-11</td>
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<td align="left">0.6.1</td>
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<td align="left">2025-07-03</td>
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<td align="left">CRAN (R 4.4.1)</td>
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</tr><tr class="even"><td align="left">cardx</td>
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<td align="left">0.2.4</td>
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<td align="left">2025-04-12</td>
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<td align="left">0.2.5</td>
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<td align="left">2025-07-03</td>
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<td align="left">CRAN (R 4.4.1)</td>
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</tr><tr class="odd"><td align="left">caTools</td>
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<td align="left">1.18.3</td>
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@ -138,69 +130,53 @@
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<td align="left">1.1.0</td>
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<td align="left">2016-07-27</td>
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<td align="left">CRAN (R 4.4.0)</td>
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</tr><tr class="odd"><td align="left">cffr</td>
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<td align="left">1.2.0</td>
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<td align="left">2025-01-25</td>
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<td align="left">CRAN (R 4.4.1)</td>
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</tr><tr class="even"><td align="left">checkmate</td>
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</tr><tr class="odd"><td align="left">checkmate</td>
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<td align="left">2.3.2</td>
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<td align="left">2024-07-29</td>
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<td align="left">CRAN (R 4.4.0)</td>
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</tr><tr class="odd"><td align="left">class</td>
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</tr><tr class="even"><td align="left">class</td>
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<td align="left">7.3-23</td>
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<td align="left">2025-01-01</td>
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<td align="left">CRAN (R 4.4.1)</td>
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</tr><tr class="even"><td align="left">classInt</td>
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</tr><tr class="odd"><td align="left">classInt</td>
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<td align="left">0.4-11</td>
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<td align="left">2025-01-08</td>
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<td align="left">CRAN (R 4.4.1)</td>
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</tr><tr class="odd"><td align="left">cli</td>
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</tr><tr class="even"><td align="left">cli</td>
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<td align="left">3.6.5</td>
|
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<td align="left">2025-04-23</td>
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<td align="left">CRAN (R 4.4.1)</td>
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</tr><tr class="even"><td align="left">cluster</td>
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</tr><tr class="odd"><td align="left">cluster</td>
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<td align="left">2.1.8.1</td>
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<td align="left">2025-03-12</td>
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<td align="left">CRAN (R 4.4.1)</td>
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</tr><tr class="odd"><td align="left">codetools</td>
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</tr><tr class="even"><td align="left">codetools</td>
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<td align="left">0.2-20</td>
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<td align="left">2024-03-31</td>
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<td align="left">CRAN (R 4.4.1)</td>
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</tr><tr class="even"><td align="left">colorspace</td>
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</tr><tr class="odd"><td align="left">colorspace</td>
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<td align="left">2.1-1</td>
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<td align="left">2024-07-26</td>
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<td align="left">CRAN (R 4.4.1)</td>
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</tr><tr class="odd"><td align="left">commonmark</td>
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<td align="left">1.9.5</td>
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<td align="left">2025-03-17</td>
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</tr><tr class="even"><td align="left">commonmark</td>
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<td align="left">2.0.0</td>
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<td align="left">2025-07-07</td>
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<td align="left">CRAN (R 4.4.1)</td>
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</tr><tr class="even"><td align="left">crayon</td>
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</tr><tr class="odd"><td align="left">crayon</td>
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<td align="left">1.5.3</td>
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<td align="left">2024-06-20</td>
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<td align="left">CRAN (R 4.4.1)</td>
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</tr><tr class="odd"><td align="left">credentials</td>
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<td align="left">2.0.2</td>
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<td align="left">2024-10-04</td>
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<td align="left">CRAN (R 4.4.1)</td>
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</tr><tr class="even"><td align="left">crosstalk</td>
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<td align="left">1.2.1</td>
|
||||
<td align="left">2023-11-23</td>
|
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<td align="left">CRAN (R 4.4.0)</td>
|
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</tr><tr class="odd"><td align="left">curl</td>
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<td align="left">6.2.2</td>
|
||||
<td align="left">2025-03-24</td>
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<td align="left">CRAN (R 4.4.1)</td>
|
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</tr><tr class="even"><td align="left">data.table</td>
|
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<td align="left">1.17.0</td>
|
||||
<td align="left">2025-02-22</td>
|
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<td align="left">1.17.8</td>
|
||||
<td align="left">2025-07-10</td>
|
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<td align="left">CRAN (R 4.4.1)</td>
|
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</tr><tr class="odd"><td align="left">datamods</td>
|
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<td align="left">1.5.3</td>
|
||||
<td align="left">2024-10-02</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">datawizard</td>
|
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<td align="left">1.0.2</td>
|
||||
<td align="left">2025-03-24</td>
|
||||
<td align="left">1.2.0</td>
|
||||
<td align="left">2025-07-17</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">DEoptimR</td>
|
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<td align="left">1.1-3-1</td>
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@ -222,41 +198,33 @@
|
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<td align="left">0.6.37</td>
|
||||
<td align="left">2024-08-19</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">dockerfiler</td>
|
||||
<td align="left">0.2.5</td>
|
||||
<td align="left">2025-05-07</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
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</tr><tr class="odd"><td align="left">doParallel</td>
|
||||
</tr><tr class="even"><td align="left">doParallel</td>
|
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<td align="left">1.0.17</td>
|
||||
<td align="left">2022-02-07</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="even"><td align="left">dplyr</td>
|
||||
</tr><tr class="odd"><td align="left">dplyr</td>
|
||||
<td align="left">1.1.4</td>
|
||||
<td align="left">2023-11-17</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="odd"><td align="left">DT</td>
|
||||
</tr><tr class="even"><td align="left">DT</td>
|
||||
<td align="left">0.33</td>
|
||||
<td align="left">2024-04-04</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="even"><td align="left">e1071</td>
|
||||
</tr><tr class="odd"><td align="left">e1071</td>
|
||||
<td align="left">1.7-16</td>
|
||||
<td align="left">2024-09-16</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">easystats</td>
|
||||
<td align="left">0.7.4</td>
|
||||
<td align="left">2025-02-06</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">effectsize</td>
|
||||
<td align="left">1.0.0</td>
|
||||
<td align="left">2024-12-10</td>
|
||||
</tr><tr class="even"><td align="left">easystats</td>
|
||||
<td align="left">0.7.5</td>
|
||||
<td align="left">2025-07-11</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">ellipsis</td>
|
||||
<td align="left">0.3.2</td>
|
||||
<td align="left">2021-04-29</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">emmeans</td>
|
||||
<td align="left">1.11.1</td>
|
||||
<td align="left">2025-05-04</td>
|
||||
<td align="left">1.11.2</td>
|
||||
<td align="left">2025-07-11</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">esquisse</td>
|
||||
<td align="left">2.1.0</td>
|
||||
|
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@ -271,8 +239,8 @@
|
|||
<td align="left">2024-03-28</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="even"><td align="left">evaluate</td>
|
||||
<td align="left">1.0.3</td>
|
||||
<td align="left">2025-01-10</td>
|
||||
<td align="left">1.0.4</td>
|
||||
<td align="left">2025-06-18</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">farver</td>
|
||||
<td align="left">2.1.2</td>
|
||||
|
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@ -283,8 +251,8 @@
|
|||
<td align="left">2024-05-15</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">flextable</td>
|
||||
<td align="left">0.9.7</td>
|
||||
<td align="left">2024-10-27</td>
|
||||
<td align="left">0.9.9</td>
|
||||
<td align="left">2025-05-31</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">fontawesome</td>
|
||||
<td align="left">0.5.3</td>
|
||||
|
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@ -331,108 +299,92 @@
|
|||
<td align="left">2025-03-27</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">generics</td>
|
||||
<td align="left">0.1.3</td>
|
||||
<td align="left">2022-07-05</td>
|
||||
<td align="left">0.1.4</td>
|
||||
<td align="left">2025-05-09</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">gert</td>
|
||||
<td align="left">2.1.5</td>
|
||||
<td align="left">2025-03-25</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">ggalluvial</td>
|
||||
</tr><tr class="even"><td align="left">ggalluvial</td>
|
||||
<td align="left">0.12.5</td>
|
||||
<td align="left">2023-02-22</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="even"><td align="left">ggcorrplot</td>
|
||||
</tr><tr class="odd"><td align="left">ggcorrplot</td>
|
||||
<td align="left">0.1.4.1</td>
|
||||
<td align="left">2023-09-05</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="odd"><td align="left">ggforce</td>
|
||||
<td align="left">0.4.2</td>
|
||||
<td align="left">2024-02-19</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="even"><td align="left">ggplot2</td>
|
||||
</tr><tr class="even"><td align="left">ggforce</td>
|
||||
<td align="left">0.5.0</td>
|
||||
<td align="left">2025-06-18</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">ggplot2</td>
|
||||
<td align="left">3.5.2</td>
|
||||
<td align="left">2025-04-09</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">ggridges</td>
|
||||
</tr><tr class="even"><td align="left">ggridges</td>
|
||||
<td align="left">0.5.6</td>
|
||||
<td align="left">2024-01-23</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="even"><td align="left">ggstats</td>
|
||||
<td align="left">0.9.0</td>
|
||||
<td align="left">2025-03-10</td>
|
||||
</tr><tr class="odd"><td align="left">ggstats</td>
|
||||
<td align="left">0.10.0</td>
|
||||
<td align="left">2025-07-02</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">gh</td>
|
||||
<td align="left">1.4.1</td>
|
||||
<td align="left">2024-03-28</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="even"><td align="left">gitcreds</td>
|
||||
<td align="left">0.1.2</td>
|
||||
<td align="left">2022-09-08</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">glue</td>
|
||||
</tr><tr class="even"><td align="left">glue</td>
|
||||
<td align="left">1.8.0</td>
|
||||
<td align="left">2024-09-30</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">gridExtra</td>
|
||||
</tr><tr class="odd"><td align="left">gridExtra</td>
|
||||
<td align="left">2.3</td>
|
||||
<td align="left">2017-09-09</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">gt</td>
|
||||
</tr><tr class="even"><td align="left">gt</td>
|
||||
<td align="left">1.0.0</td>
|
||||
<td align="left">2025-04-05</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">gtable</td>
|
||||
</tr><tr class="odd"><td align="left">gtable</td>
|
||||
<td align="left">0.3.6</td>
|
||||
<td align="left">2024-10-25</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">gtsummary</td>
|
||||
<td align="left">2.2.0</td>
|
||||
<td align="left">2025-04-14</td>
|
||||
</tr><tr class="even"><td align="left">gtsummary</td>
|
||||
<td align="left">2.3.0</td>
|
||||
<td align="left">2025-07-03</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">haven</td>
|
||||
<td align="left">2.5.4</td>
|
||||
<td align="left">2023-11-30</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="odd"><td align="left">here</td>
|
||||
</tr><tr class="odd"><td align="left">haven</td>
|
||||
<td align="left">2.5.5</td>
|
||||
<td align="left">2025-05-30</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">here</td>
|
||||
<td align="left">1.0.1</td>
|
||||
<td align="left">2020-12-13</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">Hmisc</td>
|
||||
</tr><tr class="odd"><td align="left">Hmisc</td>
|
||||
<td align="left">5.2-3</td>
|
||||
<td align="left">2025-03-16</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">hms</td>
|
||||
</tr><tr class="even"><td align="left">hms</td>
|
||||
<td align="left">1.1.3</td>
|
||||
<td align="left">2023-03-21</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="even"><td align="left">htmlTable</td>
|
||||
</tr><tr class="odd"><td align="left">htmlTable</td>
|
||||
<td align="left">2.4.3</td>
|
||||
<td align="left">2024-07-21</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="odd"><td align="left">htmltools</td>
|
||||
</tr><tr class="even"><td align="left">htmltools</td>
|
||||
<td align="left">0.5.8.1</td>
|
||||
<td align="left">2024-04-04</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">htmlwidgets</td>
|
||||
</tr><tr class="odd"><td align="left">htmlwidgets</td>
|
||||
<td align="left">1.6.4</td>
|
||||
<td align="left">2023-12-06</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="odd"><td align="left">httpuv</td>
|
||||
</tr><tr class="even"><td align="left">httpuv</td>
|
||||
<td align="left">1.6.16</td>
|
||||
<td align="left">2025-04-16</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">httr2</td>
|
||||
<td align="left">1.1.2</td>
|
||||
<td align="left">2025-03-26</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">IDEAFilter</td>
|
||||
<td align="left">0.2.0</td>
|
||||
<td align="left">2024-04-15</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="even"><td align="left">insight</td>
|
||||
<td align="left">1.2.0</td>
|
||||
<td align="left">2025-04-22</td>
|
||||
<td align="left">1.3.1</td>
|
||||
<td align="left">2025-06-30</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">iterators</td>
|
||||
<td align="left">1.0.14</td>
|
||||
|
|
@ -446,46 +398,30 @@
|
|||
<td align="left">2.0.0</td>
|
||||
<td align="left">2025-03-27</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">jsonvalidate</td>
|
||||
<td align="left">1.5.0</td>
|
||||
<td align="left">2025-02-07</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">KernSmooth</td>
|
||||
</tr><tr class="even"><td align="left">KernSmooth</td>
|
||||
<td align="left">2.23-26</td>
|
||||
<td align="left">2025-01-01</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">keyring</td>
|
||||
<td align="left">1.3.2</td>
|
||||
<td align="left">2023-12-11</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="odd"><td align="left">knitr</td>
|
||||
</tr><tr class="odd"><td align="left">keyring</td>
|
||||
<td align="left">1.4.1</td>
|
||||
<td align="left">2025-06-15</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">knitr</td>
|
||||
<td align="left">1.50</td>
|
||||
<td align="left">2025-03-16</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">labeling</td>
|
||||
<td align="left">0.4.3</td>
|
||||
<td align="left">2023-08-29</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">labelled</td>
|
||||
<td align="left">2.14.0</td>
|
||||
<td align="left">2025-01-08</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">later</td>
|
||||
</tr><tr class="odd"><td align="left">later</td>
|
||||
<td align="left">1.4.2</td>
|
||||
<td align="left">2025-04-08</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">lattice</td>
|
||||
</tr><tr class="even"><td align="left">lattice</td>
|
||||
<td align="left">0.22-7</td>
|
||||
<td align="left">2025-04-02</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">lifecycle</td>
|
||||
</tr><tr class="odd"><td align="left">lifecycle</td>
|
||||
<td align="left">1.0.4</td>
|
||||
<td align="left">2023-11-07</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">litedown</td>
|
||||
<td align="left">0.7</td>
|
||||
<td align="left">2025-04-08</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">lme4</td>
|
||||
<td align="left">1.1-37</td>
|
||||
<td align="left">2025-03-26</td>
|
||||
|
|
@ -498,26 +434,18 @@
|
|||
<td align="left">2.0.3</td>
|
||||
<td align="left">2022-03-30</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">markdown</td>
|
||||
<td align="left">2.0</td>
|
||||
<td align="left">2025-03-23</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">MASS</td>
|
||||
</tr><tr class="odd"><td align="left">MASS</td>
|
||||
<td align="left">7.3-65</td>
|
||||
<td align="left">2025-02-28</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">Matrix</td>
|
||||
</tr><tr class="even"><td align="left">Matrix</td>
|
||||
<td align="left">1.7-3</td>
|
||||
<td align="left">2025-03-11</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">memoise</td>
|
||||
</tr><tr class="odd"><td align="left">memoise</td>
|
||||
<td align="left">2.0.1</td>
|
||||
<td align="left">2021-11-26</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="odd"><td align="left">mgcv</td>
|
||||
<td align="left">1.9-3</td>
|
||||
<td align="left">2025-04-04</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">mime</td>
|
||||
<td align="left">0.13</td>
|
||||
<td align="left">2025-03-17</td>
|
||||
|
|
@ -547,141 +475,117 @@
|
|||
<td align="left">2025-01-01</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">officer</td>
|
||||
<td align="left">0.6.8</td>
|
||||
<td align="left">2025-03-23</td>
|
||||
<td align="left">0.6.10</td>
|
||||
<td align="left">2025-05-30</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">opdisDownsampling</td>
|
||||
<td align="left">1.0.1</td>
|
||||
<td align="left">2024-04-15</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="odd"><td align="left">openssl</td>
|
||||
<td align="left">2.3.2</td>
|
||||
<td align="left">2025-02-03</td>
|
||||
<td align="left">2.3.3</td>
|
||||
<td align="left">2025-05-26</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">openxlsx2</td>
|
||||
<td align="left">1.15</td>
|
||||
<td align="left">2025-04-25</td>
|
||||
<td align="left">1.17</td>
|
||||
<td align="left">2025-07-04</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">pak</td>
|
||||
<td align="left">0.8.0.2</td>
|
||||
<td align="left">2025-04-08</td>
|
||||
</tr><tr class="odd"><td align="left">parameters</td>
|
||||
<td align="left">0.27.0</td>
|
||||
<td align="left">2025-07-09</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">parameters</td>
|
||||
<td align="left">0.24.2</td>
|
||||
<td align="left">2025-03-04</td>
|
||||
</tr><tr class="even"><td align="left">patchwork</td>
|
||||
<td align="left">1.3.1</td>
|
||||
<td align="left">2025-06-21</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">patchwork</td>
|
||||
<td align="left">1.3.0</td>
|
||||
<td align="left">2024-09-16</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">pbmcapply</td>
|
||||
</tr><tr class="odd"><td align="left">pbmcapply</td>
|
||||
<td align="left">1.5.1</td>
|
||||
<td align="left">2022-04-28</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">performance</td>
|
||||
<td align="left">0.13.0</td>
|
||||
<td align="left">2025-01-15</td>
|
||||
</tr><tr class="even"><td align="left">performance</td>
|
||||
<td align="left">0.15.0</td>
|
||||
<td align="left">2025-07-10</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">phosphoricons</td>
|
||||
</tr><tr class="odd"><td align="left">phosphoricons</td>
|
||||
<td align="left">0.2.1</td>
|
||||
<td align="left">2024-04-08</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="odd"><td align="left">pillar</td>
|
||||
<td align="left">1.10.2</td>
|
||||
<td align="left">2025-04-05</td>
|
||||
</tr><tr class="even"><td align="left">pillar</td>
|
||||
<td align="left">1.11.0</td>
|
||||
<td align="left">2025-07-04</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">pkgbuild</td>
|
||||
<td align="left">1.4.7</td>
|
||||
<td align="left">2025-03-24</td>
|
||||
</tr><tr class="odd"><td align="left">pkgbuild</td>
|
||||
<td align="left">1.4.8</td>
|
||||
<td align="left">2025-05-26</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">pkgconfig</td>
|
||||
</tr><tr class="even"><td align="left">pkgconfig</td>
|
||||
<td align="left">2.0.3</td>
|
||||
<td align="left">2019-09-22</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">pkgload</td>
|
||||
</tr><tr class="odd"><td align="left">pkgload</td>
|
||||
<td align="left">1.4.0</td>
|
||||
<td align="left">2024-06-28</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="odd"><td align="left">plyr</td>
|
||||
</tr><tr class="even"><td align="left">plyr</td>
|
||||
<td align="left">1.8.9</td>
|
||||
<td align="left">2023-10-02</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">polyclip</td>
|
||||
</tr><tr class="odd"><td align="left">polyclip</td>
|
||||
<td align="left">1.10-7</td>
|
||||
<td align="left">2024-07-23</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">pracma</td>
|
||||
</tr><tr class="even"><td align="left">pracma</td>
|
||||
<td align="left">2.4.4</td>
|
||||
<td align="left">2023-11-10</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">processx</td>
|
||||
</tr><tr class="odd"><td align="left">processx</td>
|
||||
<td align="left">3.8.6</td>
|
||||
<td align="left">2025-02-21</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">profvis</td>
|
||||
</tr><tr class="even"><td align="left">profvis</td>
|
||||
<td align="left">0.4.0</td>
|
||||
<td align="left">2024-09-20</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">promises</td>
|
||||
<td align="left">1.3.2</td>
|
||||
<td align="left">2024-11-28</td>
|
||||
</tr><tr class="odd"><td align="left">promises</td>
|
||||
<td align="left">1.3.3</td>
|
||||
<td align="left">2025-05-29</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">proxy</td>
|
||||
</tr><tr class="even"><td align="left">proxy</td>
|
||||
<td align="left">0.4-27</td>
|
||||
<td align="left">2022-06-09</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">ps</td>
|
||||
</tr><tr class="odd"><td align="left">ps</td>
|
||||
<td align="left">1.9.1</td>
|
||||
<td align="left">2025-04-12</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">purrr</td>
|
||||
<td align="left">1.0.4</td>
|
||||
<td align="left">2025-02-05</td>
|
||||
</tr><tr class="even"><td align="left">purrr</td>
|
||||
<td align="left">1.1.0</td>
|
||||
<td align="left">2025-07-10</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">qqconf</td>
|
||||
</tr><tr class="odd"><td align="left">qqconf</td>
|
||||
<td align="left">1.3.2</td>
|
||||
<td align="left">2023-04-14</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="odd"><td align="left">qqplotr</td>
|
||||
</tr><tr class="even"><td align="left">qqplotr</td>
|
||||
<td align="left">0.0.6</td>
|
||||
<td align="left">2023-01-25</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="even"><td align="left">quarto</td>
|
||||
</tr><tr class="odd"><td align="left">quarto</td>
|
||||
<td align="left">1.4.4</td>
|
||||
<td align="left">2024-07-20</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="odd"><td align="left">R.cache</td>
|
||||
<td align="left">0.16.0</td>
|
||||
<td align="left">2022-07-21</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="even"><td align="left">R.methodsS3</td>
|
||||
<td align="left">1.8.2</td>
|
||||
<td align="left">2022-06-13</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">R.oo</td>
|
||||
<td align="left">1.27.0</td>
|
||||
<td align="left">2024-11-01</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">R.utils</td>
|
||||
<td align="left">2.13.0</td>
|
||||
<td align="left">2025-02-24</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">R6</td>
|
||||
</tr><tr class="even"><td align="left">R6</td>
|
||||
<td align="left">2.6.1</td>
|
||||
<td align="left">2025-02-15</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">ragg</td>
|
||||
</tr><tr class="odd"><td align="left">ragg</td>
|
||||
<td align="left">1.4.0</td>
|
||||
<td align="left">2025-04-10</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">rankinPlot</td>
|
||||
</tr><tr class="even"><td align="left">rankinPlot</td>
|
||||
<td align="left">1.1.0</td>
|
||||
<td align="left">2023-01-30</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="even"><td align="left">rappdirs</td>
|
||||
<td align="left">0.3.3</td>
|
||||
<td align="left">2021-01-31</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">rbibutils</td>
|
||||
<td align="left">2.3</td>
|
||||
<td align="left">2024-10-04</td>
|
||||
|
|
@ -691,12 +595,12 @@
|
|||
<td align="left">2022-04-03</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">Rcpp</td>
|
||||
<td align="left">1.0.14</td>
|
||||
<td align="left">2025-01-12</td>
|
||||
<td align="left">1.1.0</td>
|
||||
<td align="left">2025-07-02</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">RcppArmadillo</td>
|
||||
<td align="left">14.4.2-1</td>
|
||||
<td align="left">2025-04-25</td>
|
||||
<td align="left">14.6.0-1</td>
|
||||
<td align="left">2025-07-02</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">Rdpack</td>
|
||||
<td align="left">2.6.4</td>
|
||||
|
|
@ -727,8 +631,8 @@
|
|||
<td align="left">2025-01-11</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">reformulas</td>
|
||||
<td align="left">0.4.0</td>
|
||||
<td align="left">2024-11-03</td>
|
||||
<td align="left">0.4.1</td>
|
||||
<td align="left">2025-04-30</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">remotes</td>
|
||||
<td align="left">2.5.0</td>
|
||||
|
|
@ -771,12 +675,12 @@
|
|||
<td align="left">2025-01-07</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">rprojroot</td>
|
||||
<td align="left">2.0.4</td>
|
||||
<td align="left">2023-11-05</td>
|
||||
<td align="left">2.1.0</td>
|
||||
<td align="left">2025-07-12</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">rsconnect</td>
|
||||
<td align="left">1.3.4</td>
|
||||
<td align="left">2025-01-22</td>
|
||||
<td align="left">1.5.0</td>
|
||||
<td align="left">2025-06-26</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">rstudioapi</td>
|
||||
<td align="left">0.17.1</td>
|
||||
|
|
@ -799,33 +703,25 @@
|
|||
<td align="left">2025-02-05</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">shiny</td>
|
||||
<td align="left">1.10.0</td>
|
||||
<td align="left">2024-12-14</td>
|
||||
<td align="left">1.11.1</td>
|
||||
<td align="left">2025-07-03</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">shiny2docker</td>
|
||||
<td align="left">0.0.2</td>
|
||||
<td align="left">2025-02-09</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">shinybusy</td>
|
||||
</tr><tr class="odd"><td align="left">shinybusy</td>
|
||||
<td align="left">0.3.3</td>
|
||||
<td align="left">2024-03-09</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="odd"><td align="left">shinyjs</td>
|
||||
</tr><tr class="even"><td align="left">shinyjs</td>
|
||||
<td align="left">2.1.0</td>
|
||||
<td align="left">2021-12-23</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="even"><td align="left">shinyTime</td>
|
||||
</tr><tr class="odd"><td align="left">shinyTime</td>
|
||||
<td align="left">1.0.3</td>
|
||||
<td align="left">2022-08-19</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="odd"><td align="left">shinyWidgets</td>
|
||||
</tr><tr class="even"><td align="left">shinyWidgets</td>
|
||||
<td align="left">0.9.0</td>
|
||||
<td align="left">2025-02-21</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">sourcetools</td>
|
||||
<td align="left">0.1.7-1</td>
|
||||
<td align="left">2023-02-01</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">stringi</td>
|
||||
<td align="left">1.8.7</td>
|
||||
<td align="left">2025-03-27</td>
|
||||
|
|
@ -834,34 +730,26 @@
|
|||
<td align="left">1.5.1</td>
|
||||
<td align="left">2023-11-14</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="odd"><td align="left">styler</td>
|
||||
<td align="left">1.10.3</td>
|
||||
<td align="left">2024-04-07</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="even"><td align="left">sys</td>
|
||||
<td align="left">3.4.3</td>
|
||||
<td align="left">2024-10-04</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">systemfonts</td>
|
||||
<td align="left">1.2.2</td>
|
||||
<td align="left">2025-04-04</td>
|
||||
<td align="left">1.2.3</td>
|
||||
<td align="left">2025-04-30</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">testthat</td>
|
||||
<td align="left">3.2.3</td>
|
||||
<td align="left">2025-01-13</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">textshaping</td>
|
||||
<td align="left">1.0.0</td>
|
||||
<td align="left">2025-01-20</td>
|
||||
<td align="left">1.0.1</td>
|
||||
<td align="left">2025-05-01</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">thematic</td>
|
||||
<td align="left">0.1.6</td>
|
||||
<td align="left">2024-07-29</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
<td align="left">0.1.7</td>
|
||||
<td align="left">2025-06-19</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">tibble</td>
|
||||
<td align="left">3.2.1</td>
|
||||
<td align="left">2023-03-20</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
<td align="left">3.3.0</td>
|
||||
<td align="left">2025-06-08</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">tidyr</td>
|
||||
<td align="left">1.3.1</td>
|
||||
<td align="left">2024-01-24</td>
|
||||
|
|
@ -902,49 +790,41 @@
|
|||
<td align="left">1.2-1</td>
|
||||
<td align="left">2024-07-29</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">V8</td>
|
||||
<td align="left">6.0.3</td>
|
||||
<td align="left">2025-03-26</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">vctrs</td>
|
||||
</tr><tr class="even"><td align="left">vctrs</td>
|
||||
<td align="left">0.6.5</td>
|
||||
<td align="left">2023-12-01</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="even"><td align="left">vroom</td>
|
||||
</tr><tr class="odd"><td align="left">vroom</td>
|
||||
<td align="left">1.6.5</td>
|
||||
<td align="left">2023-12-05</td>
|
||||
<td align="left">CRAN (R 4.4.0)</td>
|
||||
</tr><tr class="odd"><td align="left">withr</td>
|
||||
</tr><tr class="even"><td align="left">withr</td>
|
||||
<td align="left">3.0.2</td>
|
||||
<td align="left">2024-10-28</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">writexl</td>
|
||||
</tr><tr class="odd"><td align="left">writexl</td>
|
||||
<td align="left">1.5.4</td>
|
||||
<td align="left">2025-04-15</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">xfun</td>
|
||||
</tr><tr class="even"><td align="left">xfun</td>
|
||||
<td align="left">0.52</td>
|
||||
<td align="left">2025-04-02</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">xml2</td>
|
||||
</tr><tr class="odd"><td align="left">xml2</td>
|
||||
<td align="left">1.3.8</td>
|
||||
<td align="left">2025-03-14</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">xtable</td>
|
||||
</tr><tr class="even"><td align="left">xtable</td>
|
||||
<td align="left">1.8-4</td>
|
||||
<td align="left">2019-04-21</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">yaml</td>
|
||||
</tr><tr class="odd"><td align="left">yaml</td>
|
||||
<td align="left">2.3.10</td>
|
||||
<td align="left">2024-07-26</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="odd"><td align="left">yesno</td>
|
||||
<td align="left">0.1.3</td>
|
||||
<td align="left">2024-07-26</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr><tr class="even"><td align="left">zip</td>
|
||||
<td align="left">2.3.2</td>
|
||||
<td align="left">2025-02-01</td>
|
||||
<td align="left">2.3.3</td>
|
||||
<td align="left">2025-05-13</td>
|
||||
<td align="left">CRAN (R 4.4.1)</td>
|
||||
</tr></tbody></table></div>
|
||||
|
||||
|
|
|
|||
|
|
@ -82,47 +82,43 @@
|
|||
<div class="section level2">
|
||||
<h2 id="getting-started-with-freesearchr">Getting started with <strong><em>FreesearchR</em></strong><a class="anchor" aria-label="anchor" href="#getting-started-with-freesearchr"></a>
|
||||
</h2>
|
||||
<p>Below is a simple walk-trough and basic instructions for the
|
||||
functions on the FreesearchR app.</p>
|
||||
<p>Below is a simple walk-trough and basic descriptions on the different
|
||||
features of the <strong><em>FreesearchR</em></strong> app.</p>
|
||||
<div class="section level3">
|
||||
<h3 id="launching">Launching<a class="anchor" aria-label="anchor" href="#launching"></a>
|
||||
</h3>
|
||||
<p>The easiest way to get started is to launch <a href="https://agdamsbo.shinyapps.io/freesearcheR/" class="external-link">the hosted version of
|
||||
the app on shinyapps.io (click this link)</a>.</p>
|
||||
<p>Additionally you have the option to run the app locally with access
|
||||
to any data in your current working environment.</p>
|
||||
<p>To do this, open <em>R</em> (or RStudio or similar), and run the
|
||||
following code to install the latest version of
|
||||
<strong><em>FreesearchR</em></strong> and launch the app:</p>
|
||||
<p>The easiest way to get started is to launch <a href="https://app.freesearchr.org/" class="external-link">the onlie version of the app (click
|
||||
this link)</a>. Please be aware not to upload sensitive data in this
|
||||
version as data security can not be guaranteed in this online
|
||||
environment. The app can easily be run from <em>R</em> on your own
|
||||
computer by running the code below (<a href="https://agdamsbo.github.io/FreesearchR/#run-locally-on-your-own-machine">read
|
||||
more on running locally here</a>):</p>
|
||||
<div class="sourceCode" id="cb1"><pre class="downlit sourceCode r">
|
||||
<code class="sourceCode R"><span><span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">require</a></span><span class="op">(</span><span class="st"><a href="https://pak.r-lib.org/" class="external-link">"pak"</a></span><span class="op">)</span></span>
|
||||
<span><span class="fu">pak</span><span class="fu">::</span><span class="fu"><a href="https://pak.r-lib.org/reference/pak.html" class="external-link">pak</a></span><span class="op">(</span><span class="st">"agdamsbo/FreesearchR"</span><span class="op">)</span></span>
|
||||
<span><span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="https://github.com/agdamsbo/FreesearchR" class="external-link">FreesearchR</a></span><span class="op">)</span></span>
|
||||
<span><span class="fu">FreesearchR</span><span class="fu">::</span><span class="fu"><a href="../reference/launch_FreesearchR.html">launch_FreesearchR</a></span><span class="op">(</span><span class="op">)</span></span></code></pre></div>
|
||||
<p>As a small note, a standalone Windows app version is on the drawing
|
||||
board as well, but no time frame is available.</p>
|
||||
board as well, but no time frame is currently available.</p>
|
||||
</div>
|
||||
<div class="section level3">
|
||||
<h3 id="importing-data">Importing data<a class="anchor" aria-label="anchor" href="#importing-data"></a>
|
||||
<h3 id="get-started">Get started<a class="anchor" aria-label="anchor" href="#get-started"></a>
|
||||
</h3>
|
||||
<p>Once in the app and in the “<strong>Import</strong>”, you have three
|
||||
<p>Once in the app, get started by loading your data. You have three
|
||||
options available for importing data: file upload, REDCap server export
|
||||
and local or sample data.</p>
|
||||
<p>After choosing a data source, you can set a threshold to filter data
|
||||
be completenes and further manually specify variables to include for
|
||||
analyses.</p>
|
||||
<p>After choosing a data source nad importing data, you can preview the
|
||||
basic data structure and missing observations, set a threshold to filter
|
||||
data by completeness and further manually specify variables to include
|
||||
for analyses.</p>
|
||||
<div class="section level4">
|
||||
<h4 id="file-upload">File upload<a class="anchor" aria-label="anchor" href="#file-upload"></a>
|
||||
</h4>
|
||||
<p>Currently several data file formats are supported for easy import
|
||||
(csv, txt, xls(x), ods, rds, dta). If importing workbooks (xls(x) or
|
||||
ods), you are prompted to specify sheet(s) to import. If choosing
|
||||
multiple sheets, these are automatically merged by common variable(s),
|
||||
so please make sure that key variables are correctly named
|
||||
identically.</p>
|
||||
<p>A notification is posted with error or success. After succesfull
|
||||
import data can be previewed directly by clicking “click to see data” in
|
||||
the notification.</p>
|
||||
<p>Several data file formats are supported for easy import (csv, txt,
|
||||
xls(x), ods, rds, dta). If importing workbooks (xls(x) or ods), you are
|
||||
prompted to specify sheet(s) to import. If choosing multiple sheets,
|
||||
these are automatically merged by common variable(s), so please make
|
||||
sure that key/ID variables are correctly named identically.</p>
|
||||
</div>
|
||||
<div class="section level4">
|
||||
<h4 id="redcap-server-export">REDCap server export<a class="anchor" aria-label="anchor" href="#redcap-server-export"></a>
|
||||
|
|
@ -134,7 +130,7 @@ rights to do so.</p>
|
|||
<p>Please don’t store the API-key on your device unless encrypted or in
|
||||
a keyring, as this may compromise data safety. Log in to your REDCap
|
||||
server and retrieve the token when needed.</p>
|
||||
<p>Type the correct webaddress of your REDCap server.</p>
|
||||
<p>Type the correct web address of your REDCap server.</p>
|
||||
<p>The module will validate the information and you can click
|
||||
“Connect”.</p>
|
||||
<p>This will unfold options to preview your data dictionary (the main
|
||||
|
|
@ -144,19 +140,19 @@ filtering options.</p>
|
|||
<div class="section level4">
|
||||
<h4 id="local-or-sample-data">Local or sample data<a class="anchor" aria-label="anchor" href="#local-or-sample-data"></a>
|
||||
</h4>
|
||||
<p>When opening the online hosted app, this is mainly for testing
|
||||
purposes. When running the app locally from <em>R</em> on your own
|
||||
computer, you will find all data.frames in the current environment here.
|
||||
This extends the possible uses of this app to allow for quick and easy
|
||||
data insights and code generation for basic plotting to fine tune.</p>
|
||||
<p>When opening the online hosted app, you can load some sample data to
|
||||
try out the app. When running the app locally from <em>R</em> on your
|
||||
own computer, you will find all data frames loaded in your environment
|
||||
here. This extends the possible uses of this app to allow for quick and
|
||||
easy data insights and code generation.</p>
|
||||
</div>
|
||||
</div>
|
||||
<div class="section level3">
|
||||
<h3 id="data">Data<a class="anchor" aria-label="anchor" href="#data"></a>
|
||||
<h3 id="prepare">Prepare<a class="anchor" aria-label="anchor" href="#prepare"></a>
|
||||
</h3>
|
||||
<p>This is the panel to get a good overview of your data, check data is
|
||||
classed and formatted correctly, perform simple modifications and filter
|
||||
data.</p>
|
||||
<p>This is the panel to prepare data for evaluation and analyses and get
|
||||
a good overview of your data, check data is classed and formatted
|
||||
correctly, perform simple modifications and filter data.</p>
|
||||
<div class="section level4">
|
||||
<h4 id="summary">Summary<a class="anchor" aria-label="anchor" href="#summary"></a>
|
||||
</h4>
|
||||
|
|
@ -341,6 +337,9 @@ analyses you should probably just write the code yourself.</p>
|
|||
</h4>
|
||||
<p>Generate simple regression models and get the results in a nice
|
||||
table. This will also be included in the exported report.</p>
|
||||
<p>This will generate a combined table with both univariate regression
|
||||
model results for each included variable and a multivariate model with
|
||||
all variables included for explorative analyses.</p>
|
||||
</div>
|
||||
<div class="section level4">
|
||||
<h4 id="plots">Plots<a class="anchor" aria-label="anchor" href="#plots"></a>
|
||||
|
|
@ -349,7 +348,7 @@ table. This will also be included in the exported report.</p>
|
|||
Choose which model(s) to include.</p>
|
||||
</div>
|
||||
<div class="section level4">
|
||||
<h4 id="checks">Checks<a class="anchor" aria-label="anchor" href="#checks"></a>
|
||||
<h4 id="model-checks">Model checks<a class="anchor" aria-label="anchor" href="#model-checks"></a>
|
||||
</h4>
|
||||
<p>Check model assumptions visually. Supported checks can be chosen.</p>
|
||||
</div>
|
||||
|
|
@ -364,7 +363,7 @@ Choose which model(s) to include.</p>
|
|||
model results. Choose between MS Word or LibreOffice format.</p>
|
||||
</div>
|
||||
<div class="section level4">
|
||||
<h4 id="data-1">Data<a class="anchor" aria-label="anchor" href="#data-1"></a>
|
||||
<h4 id="data">Data<a class="anchor" aria-label="anchor" href="#data"></a>
|
||||
</h4>
|
||||
<p>Export the modified dataset in different formats.</p>
|
||||
</div>
|
||||
|
|
|
|||
|
|
@ -92,9 +92,10 @@
|
|||
<div class="section level3">
|
||||
<h3 id="further-reading">Further reading<a class="anchor" aria-label="anchor" href="#further-reading"></a>
|
||||
</h3>
|
||||
<p>The authors behind the <a href="">{finalfit}-package</a> have shared
|
||||
a very comprehensive article on what to do and think about missing
|
||||
observations in your data. Please <a href="">have a look here</a>.</p>
|
||||
<p>The authors behind the <a href="https://finalfit.org/index.html" class="external-link">{finalfit}-package</a> have
|
||||
shared a very comprehensive article on what to do and think about
|
||||
missing observations in your data. Please <a href="https://finalfit.org/articles/missing.html" class="external-link">have a look
|
||||
here</a>.</p>
|
||||
</div>
|
||||
</div>
|
||||
</main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>
|
||||
|
|
|
|||
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|
|
@ -42,10 +42,15 @@
|
|||
</div>
|
||||
|
||||
<div class="section level2">
|
||||
<h2 class="pkg-version" data-toc-text="25.7.2" id="freesearchr-2572---dev">FreesearchR 25.7.2 - DEV<a class="anchor" aria-label="anchor" href="#freesearchr-2572---dev"></a></h2>
|
||||
<h2 class="pkg-version" data-toc-text="25.7.3" id="freesearchr-2573---dev">FreesearchR 25.7.3 - DEV<a class="anchor" aria-label="anchor" href="#freesearchr-2573---dev"></a></h2>
|
||||
<ul><li>
|
||||
<em>NEW</em> preparing to automatically only show relevant tabs to simplify interface. NOT IMPLEMENTED YET</li>
|
||||
</ul></div>
|
||||
<div class="section level2">
|
||||
<h2 class="pkg-version" data-toc-text="25.7.2" id="freesearchr-2572">FreesearchR 25.7.2<a class="anchor" aria-label="anchor" href="#freesearchr-2572"></a></h2>
|
||||
<ul><li><p><em>FIX</em> refining hiding drop downs. All JavaScript is now in separate file. Coded with GAI help from claude.ai.</p></li>
|
||||
<li><p><em>FIX</em> refined iconography and navigation</p></li>
|
||||
<li><p><em>NEW</em> preparing to automatically only show relevant tabs to simplify interface. NOT IMPLEMENTED YET</p></li>
|
||||
<li><p><em>FIX</em> updated intro and docs.</p></li>
|
||||
</ul></div>
|
||||
<div class="section level2">
|
||||
<h2 class="pkg-version" data-toc-text="25.7.1" id="freesearchr-2571">FreesearchR 25.7.1<a class="anchor" aria-label="anchor" href="#freesearchr-2571"></a></h2>
|
||||
|
|
|
|||
|
|
@ -7,7 +7,7 @@ articles:
|
|||
missingness: missingness.html
|
||||
session: session.html
|
||||
visuals: visuals.html
|
||||
last_built: 2025-07-04T08:28Z
|
||||
last_built: 2025-07-22T18:18Z
|
||||
urls:
|
||||
reference: https://agdamsbo.github.io/FreesearchR/reference
|
||||
article: https://agdamsbo.github.io/FreesearchR/articles
|
||||
|
|
|
|||
|
|
@ -139,7 +139,7 @@
|
|||
<span class="r-out co"><span class="r-pr">#></span> z$qr <- NULL</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> z</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <bytecode: 0x5606c01b6b18></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <bytecode: 0x56011de9aa50></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <environment: namespace:stats></span>
|
||||
</code></pre></div>
|
||||
</div>
|
||||
|
|
|
|||
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Add table
Reference in a new issue