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reference: https://agdamsbo.github.io/freesearcheR/reference
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reference: https://agdamsbo.github.io/freesearcheR/reference
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article: https://agdamsbo.github.io/freesearcheR/articles
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article: https://agdamsbo.github.io/freesearcheR/articles
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<!DOCTYPE html>
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<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>Attempts at applying uniform date format — clean_date • freesearcheR</title><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Montserrat-0.4.9/font.css" rel="stylesheet"><link href="../deps/Public_Sans-0.4.9/font.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet"><meta property="og:title" content="Attempts at applying uniform date format — clean_date"><meta name="description" content="Attempts at applying uniform date format"><meta property="og:description" content="Attempts at applying uniform date format"></head><body>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">25.2.1</small>
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<h1>Attempts at applying uniform date format</h1>
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<small class="dont-index">Source: <a href="https://github.com/agdamsbo/freesearcheR/blob/main/R/update-variables-ext.R" class="external-link"><code>R/update-variables-ext.R</code></a></small>
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<div class="d-none name"><code>clean_date.Rd</code></div>
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</div>
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<div class="ref-description section level2">
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<p>Attempts at applying uniform date format</p>
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</div>
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<div class="section level2">
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<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
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<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">clean_date</span><span class="op">(</span><span class="va">data</span><span class="op">)</span></span></code></pre></div>
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</div>
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<div class="section level2">
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<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
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<dl><dt id="arg-data">data<a class="anchor" aria-label="anchor" href="#arg-data"></a></dt>
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<dd><p>character string vector of possible dates</p></dd>
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</dl></div>
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<div class="section level2">
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<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
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<p>character string</p>
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</div>
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</main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>
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<div class="pkgdown-footer-right">
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<p>Developed by Andreas Gammelgaard Damsbo. Provided without <strong>any warranty</strong>.</p>
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reference/clean_sep.html
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reference/clean_sep.html
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<!DOCTYPE html>
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<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>gsub wrapper for piping with default values for separator substituting — clean_sep • freesearcheR</title><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Montserrat-0.4.9/font.css" rel="stylesheet"><link href="../deps/Public_Sans-0.4.9/font.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet"><meta property="og:title" content="gsub wrapper for piping with default values for separator substituting — clean_sep"><meta name="description" content="gsub wrapper for piping with default values for separator substituting"><meta property="og:description" content="gsub wrapper for piping with default values for separator substituting"></head><body>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">25.2.1</small>
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||||||
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<h1>gsub wrapper for piping with default values for separator substituting</h1>
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<small class="dont-index">Source: <a href="https://github.com/agdamsbo/freesearcheR/blob/main/R/update-variables-ext.R" class="external-link"><code>R/update-variables-ext.R</code></a></small>
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<div class="d-none name"><code>clean_sep.Rd</code></div>
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</div>
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<div class="ref-description section level2">
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<p>gsub wrapper for piping with default values for separator substituting</p>
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</div>
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<div class="section level2">
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<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
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<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">clean_sep</span><span class="op">(</span><span class="va">data</span>, old.sep <span class="op">=</span> <span class="st">"[-.,/]"</span>, new.sep <span class="op">=</span> <span class="st">"-"</span><span class="op">)</span></span></code></pre></div>
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<div class="section level2">
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<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
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<dl><dt id="arg-data">data<a class="anchor" aria-label="anchor" href="#arg-data"></a></dt>
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<dd><p>character vector</p></dd>
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<dt id="arg-old-sep">old.sep<a class="anchor" aria-label="anchor" href="#arg-old-sep"></a></dt>
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<dd><p>old separator</p></dd>
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<dt id="arg-new-sep">new.sep<a class="anchor" aria-label="anchor" href="#arg-new-sep"></a></dt>
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<dd><p>new separator</p></dd>
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<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
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<p>character vector</p>
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</div>
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</main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>
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<p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.1.1.</p>
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<div class="pkgdown-footer-right">
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<p>Developed by Andreas Gammelgaard Damsbo. Provided without <strong>any warranty</strong>.</p>
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reference/data-correlations.html
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reference/data-correlations.html
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<!DOCTYPE html>
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<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>Data correlations evaluation module — data-correlations • freesearcheR</title><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Montserrat-0.4.9/font.css" rel="stylesheet"><link href="../deps/Public_Sans-0.4.9/font.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet"><meta property="og:title" content="Data correlations evaluation module — data-correlations"><meta name="description" content="Data correlations evaluation module"><meta property="og:description" content="Data correlations evaluation module"></head><body>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">25.2.1</small>
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<h1>Data correlations evaluation module</h1>
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<small class="dont-index">Source: <a href="https://github.com/agdamsbo/freesearcheR/blob/main/R/correlations-module.R" class="external-link"><code>R/correlations-module.R</code></a></small>
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<div class="d-none name"><code>data-correlations.Rd</code></div>
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</div>
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<div class="ref-description section level2">
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<p>Data correlations evaluation module</p>
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</div>
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<div class="section level2">
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<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
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<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">data_correlations_ui</span><span class="op">(</span><span class="va">id</span>, <span class="va">...</span><span class="op">)</span></span>
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<span></span>
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<span><span class="fu">data_correlations_server</span><span class="op">(</span><span class="va">id</span>, <span class="va">data</span>, include.class <span class="op">=</span> <span class="cn">NULL</span>, cutoff <span class="op">=</span> <span class="fl">0.7</span>, <span class="va">...</span><span class="op">)</span></span></code></pre></div>
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<div class="section level2">
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<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
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||||||
|
<dl><dt id="arg-id">id<a class="anchor" aria-label="anchor" href="#arg-id"></a></dt>
|
||||||
|
<dd><p>Module id. (Use 'ns("id")')</p></dd>
|
||||||
|
|
||||||
|
|
||||||
|
<dt id="arg--">...<a class="anchor" aria-label="anchor" href="#arg--"></a></dt>
|
||||||
|
<dd><p>arguments passed to toastui::datagrid</p></dd>
|
||||||
|
|
||||||
|
|
||||||
|
<dt id="arg-data">data<a class="anchor" aria-label="anchor" href="#arg-data"></a></dt>
|
||||||
|
<dd><p>data</p></dd>
|
||||||
|
|
||||||
|
|
||||||
|
<dt id="arg-color-main">color.main<a class="anchor" aria-label="anchor" href="#arg-color-main"></a></dt>
|
||||||
|
<dd><p>main color</p></dd>
|
||||||
|
|
||||||
|
|
||||||
|
<dt id="arg-color-sec">color.sec<a class="anchor" aria-label="anchor" href="#arg-color-sec"></a></dt>
|
||||||
|
<dd><p>secondary color</p></dd>
|
||||||
|
|
||||||
|
</dl></div>
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
|
||||||
|
<p>Shiny ui module</p>
|
||||||
|
<p>shiny server module</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
</main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>
|
||||||
|
</nav></aside></div>
|
||||||
|
|
||||||
|
|
||||||
|
<footer><div class="pkgdown-footer-left">
|
||||||
|
<p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.1.1.</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="pkgdown-footer-right">
|
||||||
|
<p>Developed by Andreas Gammelgaard Damsbo. Provided without <strong>any warranty</strong>.</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
</footer></div>
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
</body></html>
|
||||||
|
|
||||||
|
|
@ -42,7 +42,7 @@
|
||||||
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
|
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
|
||||||
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">data_summary_ui</span><span class="op">(</span><span class="va">id</span><span class="op">)</span></span>
|
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">data_summary_ui</span><span class="op">(</span><span class="va">id</span><span class="op">)</span></span>
|
||||||
<span></span>
|
<span></span>
|
||||||
<span><span class="fu">data_summary_server</span><span class="op">(</span><span class="va">id</span>, <span class="va">data</span>, <span class="va">color.main</span>, <span class="va">color.sec</span><span class="op">)</span></span></code></pre></div>
|
<span><span class="fu">data_summary_server</span><span class="op">(</span><span class="va">id</span>, <span class="va">data</span>, <span class="va">color.main</span>, <span class="va">color.sec</span>, <span class="va">...</span><span class="op">)</span></span></code></pre></div>
|
||||||
</div>
|
</div>
|
||||||
|
|
||||||
<div class="section level2">
|
<div class="section level2">
|
||||||
|
|
@ -50,7 +50,7 @@
|
||||||
|
|
||||||
|
|
||||||
<dl><dt id="arg-id">id<a class="anchor" aria-label="anchor" href="#arg-id"></a></dt>
|
<dl><dt id="arg-id">id<a class="anchor" aria-label="anchor" href="#arg-id"></a></dt>
|
||||||
<dd><p>id</p></dd>
|
<dd><p>Module id. (Use 'ns("id")')</p></dd>
|
||||||
|
|
||||||
|
|
||||||
<dt id="arg-data">data<a class="anchor" aria-label="anchor" href="#arg-data"></a></dt>
|
<dt id="arg-data">data<a class="anchor" aria-label="anchor" href="#arg-data"></a></dt>
|
||||||
|
|
@ -64,6 +64,10 @@
|
||||||
<dt id="arg-color-sec">color.sec<a class="anchor" aria-label="anchor" href="#arg-color-sec"></a></dt>
|
<dt id="arg-color-sec">color.sec<a class="anchor" aria-label="anchor" href="#arg-color-sec"></a></dt>
|
||||||
<dd><p>secondary color</p></dd>
|
<dd><p>secondary color</p></dd>
|
||||||
|
|
||||||
|
|
||||||
|
<dt id="arg--">...<a class="anchor" aria-label="anchor" href="#arg--"></a></dt>
|
||||||
|
<dd><p>arguments passed to toastui::datagrid</p></dd>
|
||||||
|
|
||||||
</dl></div>
|
</dl></div>
|
||||||
<div class="section level2">
|
<div class="section level2">
|
||||||
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
|
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
|
||||||
|
|
|
||||||
8
reference/data_correlations_server.html
Normal file
8
reference/data_correlations_server.html
Normal file
|
|
@ -0,0 +1,8 @@
|
||||||
|
<html>
|
||||||
|
<head>
|
||||||
|
<meta http-equiv="refresh" content="0;URL=https://agdamsbo.github.io/freesearcheR/reference/data-correlations.html" />
|
||||||
|
<meta name="robots" content="noindex">
|
||||||
|
<link rel="canonical" href="https://agdamsbo.github.io/freesearcheR/reference/data-correlations.html">
|
||||||
|
</head>
|
||||||
|
</html>
|
||||||
|
|
||||||
8
reference/data_correlations_ui.html
Normal file
8
reference/data_correlations_ui.html
Normal file
|
|
@ -0,0 +1,8 @@
|
||||||
|
<html>
|
||||||
|
<head>
|
||||||
|
<meta http-equiv="refresh" content="0;URL=https://agdamsbo.github.io/freesearcheR/reference/data-correlations.html" />
|
||||||
|
<meta name="robots" content="noindex">
|
||||||
|
<link rel="canonical" href="https://agdamsbo.github.io/freesearcheR/reference/data-correlations.html">
|
||||||
|
</head>
|
||||||
|
</html>
|
||||||
|
|
||||||
118
reference/get_fun_options.html
Normal file
118
reference/get_fun_options.html
Normal file
|
|
@ -0,0 +1,118 @@
|
||||||
|
<!DOCTYPE html>
|
||||||
|
<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>Get the function options based on the selected function description — get_fun_options • freesearcheR</title><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Montserrat-0.4.9/font.css" rel="stylesheet"><link href="../deps/Public_Sans-0.4.9/font.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet"><meta property="og:title" content="Get the function options based on the selected function description — get_fun_options"><meta name="description" content="Get the function options based on the selected function description"><meta property="og:description" content="Get the function options based on the selected function description"></head><body>
|
||||||
|
<a href="#main" class="visually-hidden-focusable">Skip to contents</a>
|
||||||
|
|
||||||
|
|
||||||
|
<nav class="navbar navbar-expand-lg fixed-top bg-primary" data-bs-theme="dark" aria-label="Site navigation"><div class="container">
|
||||||
|
|
||||||
|
<a class="navbar-brand me-2" href="../index.html">freesearcheR</a>
|
||||||
|
|
||||||
|
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">25.2.1</small>
|
||||||
|
|
||||||
|
|
||||||
|
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||||
|
<span class="navbar-toggler-icon"></span>
|
||||||
|
</button>
|
||||||
|
|
||||||
|
<div id="navbar" class="collapse navbar-collapse ms-3">
|
||||||
|
<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
|
||||||
|
<li class="nav-item"><a class="nav-link" href="../ROADMAP.html">Roadmap</a></li>
|
||||||
|
<li class="nav-item"><a class="nav-link" href="../news/index.html">Changelog</a></li>
|
||||||
|
</ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search">
|
||||||
|
<input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li>
|
||||||
|
<li class="nav-item"><a class="external-link nav-link" href="https://github.com/agdamsbo/freesearcheR/" aria-label="GitHub"><span class="fa fab fa-github fa-lg"></span></a></li>
|
||||||
|
</ul></div>
|
||||||
|
|
||||||
|
|
||||||
|
</div>
|
||||||
|
</nav><div class="container template-reference-topic">
|
||||||
|
<div class="row">
|
||||||
|
<main id="main" class="col-md-9"><div class="page-header">
|
||||||
|
|
||||||
|
<h1>Get the function options based on the selected function description</h1>
|
||||||
|
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/freesearcheR/blob/main/R/regression_model.R" class="external-link"><code>R/regression_model.R</code></a></small>
|
||||||
|
<div class="d-none name"><code>get_fun_options.Rd</code></div>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="ref-description section level2">
|
||||||
|
<p>Get the function options based on the selected function description</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
|
||||||
|
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">get_fun_options</span><span class="op">(</span><span class="va">data</span><span class="op">)</span></span></code></pre></div>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
|
||||||
|
|
||||||
|
|
||||||
|
<dl><dt id="arg-data">data<a class="anchor" aria-label="anchor" href="#arg-data"></a></dt>
|
||||||
|
<dd><p>vector</p></dd>
|
||||||
|
|
||||||
|
</dl></div>
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
|
||||||
|
<p>list</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
|
||||||
|
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="va">mtcars</span> <span class="op">|></span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="fu"><a href="default_parsing.html">default_parsing</a></span><span class="op">(</span><span class="op">)</span> <span class="op">|></span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="fu">dplyr</span><span class="fu">::</span><span class="fu"><a href="https://dplyr.tidyverse.org/reference/pull.html" class="external-link">pull</a></span><span class="op">(</span><span class="va">mpg</span><span class="op">)</span> <span class="op">|></span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="fu"><a href="possible_functions.html">possible_functions</a></span><span class="op">(</span>design <span class="op">=</span> <span class="st">"cross-sectional"</span><span class="op">)</span> <span class="op">|></span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="op">(</span>\<span class="op">(</span><span class="va">.x</span><span class="op">)</span><span class="op">{</span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="va">.x</span><span class="op">[[</span><span class="fl">1</span><span class="op">]</span><span class="op">]</span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="op">}</span><span class="op">)</span><span class="op">(</span><span class="op">)</span> <span class="op">|></span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="fu">get_fun_options</span><span class="op">(</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $lm</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $lm$descr</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "Linear regression model"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $lm$design</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "cross-sectional"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $lm$out.type</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "continuous"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $lm$fun</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "stats::lm"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $lm$args.list</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> NULL</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $lm$formula.str</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "{outcome.str}~{paste(vars,collapse='+')}"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $lm$table.fun</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "gtsummary::tbl_regression"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $lm$table.args.list</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $lm$table.args.list$exponentiate</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] FALSE</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
</code></pre></div>
|
||||||
|
</div>
|
||||||
|
</main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>
|
||||||
|
</nav></aside></div>
|
||||||
|
|
||||||
|
|
||||||
|
<footer><div class="pkgdown-footer-left">
|
||||||
|
<p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.1.1.</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="pkgdown-footer-right">
|
||||||
|
<p>Developed by Andreas Gammelgaard Damsbo. Provided without <strong>any warranty</strong>.</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
</footer></div>
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
</body></html>
|
||||||
|
|
||||||
|
|
@ -131,7 +131,7 @@
|
||||||
<span class="r-out co"><span class="r-pr">#></span> z$qr <- NULL</span>
|
<span class="r-out co"><span class="r-pr">#></span> z$qr <- NULL</span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> z</span>
|
<span class="r-out co"><span class="r-pr">#></span> z</span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
<span class="r-out co"><span class="r-pr">#></span> }</span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> <bytecode: 0x55f395fa03c8></span>
|
<span class="r-out co"><span class="r-pr">#></span> <bytecode: 0x55c682a23c78></span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> <environment: namespace:stats></span>
|
<span class="r-out co"><span class="r-pr">#></span> <environment: namespace:stats></span>
|
||||||
</code></pre></div>
|
</code></pre></div>
|
||||||
</div>
|
</div>
|
||||||
|
|
|
||||||
78
reference/gg_theme_export.html
Normal file
78
reference/gg_theme_export.html
Normal file
|
|
@ -0,0 +1,78 @@
|
||||||
|
<!DOCTYPE html>
|
||||||
|
<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>GGplot default theme for plotting export objects — gg_theme_export • freesearcheR</title><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Montserrat-0.4.9/font.css" rel="stylesheet"><link href="../deps/Public_Sans-0.4.9/font.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet"><meta property="og:title" content="GGplot default theme for plotting export objects — gg_theme_export"><meta name="description" content="GGplot default theme for plotting export objects"><meta property="og:description" content="GGplot default theme for plotting export objects"></head><body>
|
||||||
|
<a href="#main" class="visually-hidden-focusable">Skip to contents</a>
|
||||||
|
|
||||||
|
|
||||||
|
<nav class="navbar navbar-expand-lg fixed-top bg-primary" data-bs-theme="dark" aria-label="Site navigation"><div class="container">
|
||||||
|
|
||||||
|
<a class="navbar-brand me-2" href="../index.html">freesearcheR</a>
|
||||||
|
|
||||||
|
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">25.2.1</small>
|
||||||
|
|
||||||
|
|
||||||
|
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||||
|
<span class="navbar-toggler-icon"></span>
|
||||||
|
</button>
|
||||||
|
|
||||||
|
<div id="navbar" class="collapse navbar-collapse ms-3">
|
||||||
|
<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
|
||||||
|
<li class="nav-item"><a class="nav-link" href="../ROADMAP.html">Roadmap</a></li>
|
||||||
|
<li class="nav-item"><a class="nav-link" href="../news/index.html">Changelog</a></li>
|
||||||
|
</ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search">
|
||||||
|
<input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li>
|
||||||
|
<li class="nav-item"><a class="external-link nav-link" href="https://github.com/agdamsbo/freesearcheR/" aria-label="GitHub"><span class="fa fab fa-github fa-lg"></span></a></li>
|
||||||
|
</ul></div>
|
||||||
|
|
||||||
|
|
||||||
|
</div>
|
||||||
|
</nav><div class="container template-reference-topic">
|
||||||
|
<div class="row">
|
||||||
|
<main id="main" class="col-md-9"><div class="page-header">
|
||||||
|
|
||||||
|
<h1>GGplot default theme for plotting export objects</h1>
|
||||||
|
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/freesearcheR/blob/main/R/theme.R" class="external-link"><code>R/theme.R</code></a></small>
|
||||||
|
<div class="d-none name"><code>gg_theme_export.Rd</code></div>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="ref-description section level2">
|
||||||
|
<p>GGplot default theme for plotting export objects</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
|
||||||
|
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">gg_theme_export</span><span class="op">(</span><span class="op">)</span></span></code></pre></div>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
|
||||||
|
|
||||||
|
|
||||||
|
<dl><dt id="arg-data">data<a class="anchor" aria-label="anchor" href="#arg-data"></a></dt>
|
||||||
|
<dd><p>ggplot object</p></dd>
|
||||||
|
|
||||||
|
</dl></div>
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
|
||||||
|
<p>ggplot object</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
</main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>
|
||||||
|
</nav></aside></div>
|
||||||
|
|
||||||
|
|
||||||
|
<footer><div class="pkgdown-footer-left">
|
||||||
|
<p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.1.1.</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="pkgdown-footer-right">
|
||||||
|
<p>Developed by Andreas Gammelgaard Damsbo. Provided without <strong>any warranty</strong>.</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
</footer></div>
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
</body></html>
|
||||||
|
|
||||||
78
reference/gg_theme_shiny.html
Normal file
78
reference/gg_theme_shiny.html
Normal file
|
|
@ -0,0 +1,78 @@
|
||||||
|
<!DOCTYPE html>
|
||||||
|
<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>GGplot default theme for plotting in Shiny — gg_theme_shiny • freesearcheR</title><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Montserrat-0.4.9/font.css" rel="stylesheet"><link href="../deps/Public_Sans-0.4.9/font.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet"><meta property="og:title" content="GGplot default theme for plotting in Shiny — gg_theme_shiny"><meta name="description" content="GGplot default theme for plotting in Shiny"><meta property="og:description" content="GGplot default theme for plotting in Shiny"></head><body>
|
||||||
|
<a href="#main" class="visually-hidden-focusable">Skip to contents</a>
|
||||||
|
|
||||||
|
|
||||||
|
<nav class="navbar navbar-expand-lg fixed-top bg-primary" data-bs-theme="dark" aria-label="Site navigation"><div class="container">
|
||||||
|
|
||||||
|
<a class="navbar-brand me-2" href="../index.html">freesearcheR</a>
|
||||||
|
|
||||||
|
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">25.2.1</small>
|
||||||
|
|
||||||
|
|
||||||
|
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||||
|
<span class="navbar-toggler-icon"></span>
|
||||||
|
</button>
|
||||||
|
|
||||||
|
<div id="navbar" class="collapse navbar-collapse ms-3">
|
||||||
|
<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
|
||||||
|
<li class="nav-item"><a class="nav-link" href="../ROADMAP.html">Roadmap</a></li>
|
||||||
|
<li class="nav-item"><a class="nav-link" href="../news/index.html">Changelog</a></li>
|
||||||
|
</ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search">
|
||||||
|
<input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li>
|
||||||
|
<li class="nav-item"><a class="external-link nav-link" href="https://github.com/agdamsbo/freesearcheR/" aria-label="GitHub"><span class="fa fab fa-github fa-lg"></span></a></li>
|
||||||
|
</ul></div>
|
||||||
|
|
||||||
|
|
||||||
|
</div>
|
||||||
|
</nav><div class="container template-reference-topic">
|
||||||
|
<div class="row">
|
||||||
|
<main id="main" class="col-md-9"><div class="page-header">
|
||||||
|
|
||||||
|
<h1>GGplot default theme for plotting in Shiny</h1>
|
||||||
|
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/freesearcheR/blob/main/R/theme.R" class="external-link"><code>R/theme.R</code></a></small>
|
||||||
|
<div class="d-none name"><code>gg_theme_shiny.Rd</code></div>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="ref-description section level2">
|
||||||
|
<p>GGplot default theme for plotting in Shiny</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
|
||||||
|
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">gg_theme_shiny</span><span class="op">(</span><span class="op">)</span></span></code></pre></div>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
|
||||||
|
|
||||||
|
|
||||||
|
<dl><dt id="arg-data">data<a class="anchor" aria-label="anchor" href="#arg-data"></a></dt>
|
||||||
|
<dd><p>ggplot object</p></dd>
|
||||||
|
|
||||||
|
</dl></div>
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
|
||||||
|
<p>ggplot object</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
</main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>
|
||||||
|
</nav></aside></div>
|
||||||
|
|
||||||
|
|
||||||
|
<footer><div class="pkgdown-footer-left">
|
||||||
|
<p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.1.1.</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="pkgdown-footer-right">
|
||||||
|
<p>Developed by Andreas Gammelgaard Damsbo. Provided without <strong>any warranty</strong>.</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
</footer></div>
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
</body></html>
|
||||||
|
|
||||||
|
|
@ -69,6 +69,18 @@
|
||||||
<dd>Print a flexible baseline characteristics table</dd>
|
<dd>Print a flexible baseline characteristics table</dd>
|
||||||
</dl><dl><dt>
|
</dl><dl><dt>
|
||||||
|
|
||||||
|
<code><a href="clean_date.html">clean_date()</a></code>
|
||||||
|
|
||||||
|
</dt>
|
||||||
|
<dd>Attempts at applying uniform date format</dd>
|
||||||
|
</dl><dl><dt>
|
||||||
|
|
||||||
|
<code><a href="clean_sep.html">clean_sep()</a></code>
|
||||||
|
|
||||||
|
</dt>
|
||||||
|
<dd>gsub wrapper for piping with default values for separator substituting</dd>
|
||||||
|
</dl><dl><dt>
|
||||||
|
|
||||||
<code><a href="create_overview_datagrid.html">create_overview_datagrid()</a></code>
|
<code><a href="create_overview_datagrid.html">create_overview_datagrid()</a></code>
|
||||||
|
|
||||||
</dt>
|
</dt>
|
||||||
|
|
@ -93,6 +105,12 @@
|
||||||
<dd>Extended cutting function</dd>
|
<dd>Extended cutting function</dd>
|
||||||
</dl><dl><dt>
|
</dl><dl><dt>
|
||||||
|
|
||||||
|
<code><a href="data-correlations.html">data_correlations_ui()</a></code> <code><a href="data-correlations.html">data_correlations_server()</a></code>
|
||||||
|
|
||||||
|
</dt>
|
||||||
|
<dd>Data correlations evaluation module</dd>
|
||||||
|
</dl><dl><dt>
|
||||||
|
|
||||||
<code><a href="data-summary.html">data_summary_ui()</a></code> <code><a href="data-summary.html">data_summary_server()</a></code>
|
<code><a href="data-summary.html">data_summary_ui()</a></code> <code><a href="data-summary.html">data_summary_server()</a></code>
|
||||||
|
|
||||||
</dt>
|
</dt>
|
||||||
|
|
@ -129,12 +147,30 @@
|
||||||
<dd>Merges list of named arguments for qmd header generation</dd>
|
<dd>Merges list of named arguments for qmd header generation</dd>
|
||||||
</dl><dl><dt>
|
</dl><dl><dt>
|
||||||
|
|
||||||
|
<code><a href="get_fun_options.html">get_fun_options()</a></code>
|
||||||
|
|
||||||
|
</dt>
|
||||||
|
<dd>Get the function options based on the selected function description</dd>
|
||||||
|
</dl><dl><dt>
|
||||||
|
|
||||||
<code><a href="getfun.html">getfun()</a></code>
|
<code><a href="getfun.html">getfun()</a></code>
|
||||||
|
|
||||||
</dt>
|
</dt>
|
||||||
<dd>Wrapper function to get function from character vector referring to function from namespace. Passed to 'do.call()'</dd>
|
<dd>Wrapper function to get function from character vector referring to function from namespace. Passed to 'do.call()'</dd>
|
||||||
</dl><dl><dt>
|
</dl><dl><dt>
|
||||||
|
|
||||||
|
<code><a href="gg_theme_export.html">gg_theme_export()</a></code>
|
||||||
|
|
||||||
|
</dt>
|
||||||
|
<dd>GGplot default theme for plotting export objects</dd>
|
||||||
|
</dl><dl><dt>
|
||||||
|
|
||||||
|
<code><a href="gg_theme_shiny.html">gg_theme_shiny()</a></code>
|
||||||
|
|
||||||
|
</dt>
|
||||||
|
<dd>GGplot default theme for plotting in Shiny</dd>
|
||||||
|
</dl><dl><dt>
|
||||||
|
|
||||||
<code><a href="index_embed.html">index_embed()</a></code>
|
<code><a href="index_embed.html">index_embed()</a></code>
|
||||||
|
|
||||||
</dt>
|
</dt>
|
||||||
|
|
@ -159,24 +195,54 @@
|
||||||
<dd>Test is date/datetime/time</dd>
|
<dd>Test is date/datetime/time</dd>
|
||||||
</dl><dl><dt>
|
</dl><dl><dt>
|
||||||
|
|
||||||
|
<code><a href="launch.html">launch()</a></code>
|
||||||
|
|
||||||
|
</dt>
|
||||||
|
<dd>Easily launch the freesearcheR app</dd>
|
||||||
|
</dl><dl><dt>
|
||||||
|
|
||||||
<code><a href="m_datafileUI.html">m_datafileUI()</a></code>
|
<code><a href="m_datafileUI.html">m_datafileUI()</a></code>
|
||||||
|
|
||||||
</dt>
|
</dt>
|
||||||
<dd>Shiny UI module to load a data file</dd>
|
<dd>Shiny UI module to load a data file</dd>
|
||||||
</dl><dl><dt>
|
</dl><dl><dt>
|
||||||
|
|
||||||
|
<code><a href="merge_long.html">merge_long()</a></code>
|
||||||
|
|
||||||
|
</dt>
|
||||||
|
<dd>Wrapper to pivot gtsummary table data to long for plotting</dd>
|
||||||
|
</dl><dl><dt>
|
||||||
|
|
||||||
<code><a href="modify_qmd.html">modify_qmd()</a></code>
|
<code><a href="modify_qmd.html">modify_qmd()</a></code>
|
||||||
|
|
||||||
</dt>
|
</dt>
|
||||||
<dd>Wrapper to modify quarto file to render specific formats</dd>
|
<dd>Wrapper to modify quarto file to render specific formats</dd>
|
||||||
</dl><dl><dt>
|
</dl><dl><dt>
|
||||||
|
|
||||||
|
<code><a href="outcome_type.html">outcome_type()</a></code>
|
||||||
|
|
||||||
|
</dt>
|
||||||
|
<dd>Outcome data type assessment</dd>
|
||||||
|
</dl><dl><dt>
|
||||||
|
|
||||||
<code><a href="overview_vars.html">overview_vars()</a></code>
|
<code><a href="overview_vars.html">overview_vars()</a></code>
|
||||||
|
|
||||||
</dt>
|
</dt>
|
||||||
<dd>Create a data overview data.frame ready for sparklines</dd>
|
<dd>Create a data overview data.frame ready for sparklines</dd>
|
||||||
</dl><dl><dt>
|
</dl><dl><dt>
|
||||||
|
|
||||||
|
<code><a href="plot.tbl_regression.html">plot(<i><tbl_regression></i>)</a></code>
|
||||||
|
|
||||||
|
</dt>
|
||||||
|
<dd>Regression coef plot from gtsummary. Slightly modified to pass on arguments</dd>
|
||||||
|
</dl><dl><dt>
|
||||||
|
|
||||||
|
<code><a href="possible_functions.html">possible_functions()</a></code>
|
||||||
|
|
||||||
|
</dt>
|
||||||
|
<dd>Get possible regression models</dd>
|
||||||
|
</dl><dl><dt>
|
||||||
|
|
||||||
<code><a href="read_input.html">read_input()</a></code>
|
<code><a href="read_input.html">read_input()</a></code>
|
||||||
|
|
||||||
</dt>
|
</dt>
|
||||||
|
|
@ -189,13 +255,7 @@
|
||||||
<dd>Shiny module to browser and export REDCap data</dd>
|
<dd>Shiny module to browser and export REDCap data</dd>
|
||||||
</dl><dl><dt>
|
</dl><dl><dt>
|
||||||
|
|
||||||
<code><a href="regression_model.html">regression_model()</a></code>
|
<code><a href="regression_model.html">regression_model()</a></code> <code><a href="regression_model.html">regression_model_uv()</a></code> <code><a href="regression_model.html">regression_model_list()</a></code> <code><a href="regression_model.html">regression_model_uv_list()</a></code>
|
||||||
|
|
||||||
</dt>
|
|
||||||
<dd>Create a regression model programatically</dd>
|
|
||||||
</dl><dl><dt>
|
|
||||||
|
|
||||||
<code><a href="regression_model_uv.html">regression_model_uv()</a></code>
|
|
||||||
|
|
||||||
</dt>
|
</dt>
|
||||||
<dd>Create a regression model programatically</dd>
|
<dd>Create a regression model programatically</dd>
|
||||||
|
|
@ -207,6 +267,12 @@
|
||||||
<dd>Create table of regression model</dd>
|
<dd>Create table of regression model</dd>
|
||||||
</dl><dl><dt>
|
</dl><dl><dt>
|
||||||
|
|
||||||
|
<code><a href="remove_empty_cols.html">remove_empty_cols()</a></code>
|
||||||
|
|
||||||
|
</dt>
|
||||||
|
<dd>Removes columns with completenes below cutoff</dd>
|
||||||
|
</dl><dl><dt>
|
||||||
|
|
||||||
<code><a href="remove_na_attr.html">remove_na_attr()</a></code>
|
<code><a href="remove_na_attr.html">remove_na_attr()</a></code>
|
||||||
|
|
||||||
</dt>
|
</dt>
|
||||||
|
|
@ -225,6 +291,12 @@
|
||||||
<dd>Specify format arguments to include in qmd header/frontmatter</dd>
|
<dd>Specify format arguments to include in qmd header/frontmatter</dd>
|
||||||
</dl><dl><dt>
|
</dl><dl><dt>
|
||||||
|
|
||||||
|
<code><a href="supported_functions.html">supported_functions()</a></code>
|
||||||
|
|
||||||
|
</dt>
|
||||||
|
<dd>Implemented functions</dd>
|
||||||
|
</dl><dl><dt>
|
||||||
|
|
||||||
<code><a href="tbl_merge.html">tbl_merge()</a></code>
|
<code><a href="tbl_merge.html">tbl_merge()</a></code>
|
||||||
|
|
||||||
</dt>
|
</dt>
|
||||||
|
|
|
||||||
78
reference/launch.html
Normal file
78
reference/launch.html
Normal file
|
|
@ -0,0 +1,78 @@
|
||||||
|
<!DOCTYPE html>
|
||||||
|
<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>Easily launch the freesearcheR app — launch • freesearcheR</title><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Montserrat-0.4.9/font.css" rel="stylesheet"><link href="../deps/Public_Sans-0.4.9/font.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet"><meta property="og:title" content="Easily launch the freesearcheR app — launch"><meta name="description" content="Easily launch the freesearcheR app"><meta property="og:description" content="Easily launch the freesearcheR app"></head><body>
|
||||||
|
<a href="#main" class="visually-hidden-focusable">Skip to contents</a>
|
||||||
|
|
||||||
|
|
||||||
|
<nav class="navbar navbar-expand-lg fixed-top bg-primary" data-bs-theme="dark" aria-label="Site navigation"><div class="container">
|
||||||
|
|
||||||
|
<a class="navbar-brand me-2" href="../index.html">freesearcheR</a>
|
||||||
|
|
||||||
|
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">25.2.1</small>
|
||||||
|
|
||||||
|
|
||||||
|
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||||
|
<span class="navbar-toggler-icon"></span>
|
||||||
|
</button>
|
||||||
|
|
||||||
|
<div id="navbar" class="collapse navbar-collapse ms-3">
|
||||||
|
<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
|
||||||
|
<li class="nav-item"><a class="nav-link" href="../ROADMAP.html">Roadmap</a></li>
|
||||||
|
<li class="nav-item"><a class="nav-link" href="../news/index.html">Changelog</a></li>
|
||||||
|
</ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search">
|
||||||
|
<input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li>
|
||||||
|
<li class="nav-item"><a class="external-link nav-link" href="https://github.com/agdamsbo/freesearcheR/" aria-label="GitHub"><span class="fa fab fa-github fa-lg"></span></a></li>
|
||||||
|
</ul></div>
|
||||||
|
|
||||||
|
|
||||||
|
</div>
|
||||||
|
</nav><div class="container template-reference-topic">
|
||||||
|
<div class="row">
|
||||||
|
<main id="main" class="col-md-9"><div class="page-header">
|
||||||
|
|
||||||
|
<h1>Easily launch the freesearcheR app</h1>
|
||||||
|
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/freesearcheR/blob/main/R/shiny_freesearcheR.R" class="external-link"><code>R/shiny_freesearcheR.R</code></a></small>
|
||||||
|
<div class="d-none name"><code>launch.Rd</code></div>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="ref-description section level2">
|
||||||
|
<p>Easily launch the freesearcheR app</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
|
||||||
|
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">launch</span><span class="op">(</span><span class="va">...</span><span class="op">)</span></span></code></pre></div>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
|
||||||
|
|
||||||
|
|
||||||
|
<dl><dt id="arg--">...<a class="anchor" aria-label="anchor" href="#arg--"></a></dt>
|
||||||
|
<dd><p>passed on to <code><a href="https://rdrr.io/pkg/shiny/man/runApp.html" class="external-link">shiny::runApp()</a></code></p></dd>
|
||||||
|
|
||||||
|
</dl></div>
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
|
||||||
|
<p>shiny app</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
</main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>
|
||||||
|
</nav></aside></div>
|
||||||
|
|
||||||
|
|
||||||
|
<footer><div class="pkgdown-footer-left">
|
||||||
|
<p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.1.1.</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="pkgdown-footer-right">
|
||||||
|
<p>Developed by Andreas Gammelgaard Damsbo. Provided without <strong>any warranty</strong>.</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
</footer></div>
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
</body></html>
|
||||||
|
|
||||||
82
reference/merge_long.html
Normal file
82
reference/merge_long.html
Normal file
|
|
@ -0,0 +1,82 @@
|
||||||
|
<!DOCTYPE html>
|
||||||
|
<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>Wrapper to pivot gtsummary table data to long for plotting — merge_long • freesearcheR</title><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Montserrat-0.4.9/font.css" rel="stylesheet"><link href="../deps/Public_Sans-0.4.9/font.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet"><meta property="og:title" content="Wrapper to pivot gtsummary table data to long for plotting — merge_long"><meta name="description" content="Wrapper to pivot gtsummary table data to long for plotting"><meta property="og:description" content="Wrapper to pivot gtsummary table data to long for plotting"></head><body>
|
||||||
|
<a href="#main" class="visually-hidden-focusable">Skip to contents</a>
|
||||||
|
|
||||||
|
|
||||||
|
<nav class="navbar navbar-expand-lg fixed-top bg-primary" data-bs-theme="dark" aria-label="Site navigation"><div class="container">
|
||||||
|
|
||||||
|
<a class="navbar-brand me-2" href="../index.html">freesearcheR</a>
|
||||||
|
|
||||||
|
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">25.2.1</small>
|
||||||
|
|
||||||
|
|
||||||
|
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||||
|
<span class="navbar-toggler-icon"></span>
|
||||||
|
</button>
|
||||||
|
|
||||||
|
<div id="navbar" class="collapse navbar-collapse ms-3">
|
||||||
|
<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
|
||||||
|
<li class="nav-item"><a class="nav-link" href="../ROADMAP.html">Roadmap</a></li>
|
||||||
|
<li class="nav-item"><a class="nav-link" href="../news/index.html">Changelog</a></li>
|
||||||
|
</ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search">
|
||||||
|
<input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li>
|
||||||
|
<li class="nav-item"><a class="external-link nav-link" href="https://github.com/agdamsbo/freesearcheR/" aria-label="GitHub"><span class="fa fab fa-github fa-lg"></span></a></li>
|
||||||
|
</ul></div>
|
||||||
|
|
||||||
|
|
||||||
|
</div>
|
||||||
|
</nav><div class="container template-reference-topic">
|
||||||
|
<div class="row">
|
||||||
|
<main id="main" class="col-md-9"><div class="page-header">
|
||||||
|
|
||||||
|
<h1>Wrapper to pivot gtsummary table data to long for plotting</h1>
|
||||||
|
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/freesearcheR/blob/main/R/regression_plot.R" class="external-link"><code>R/regression_plot.R</code></a></small>
|
||||||
|
<div class="d-none name"><code>merge_long.Rd</code></div>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="ref-description section level2">
|
||||||
|
<p>Wrapper to pivot gtsummary table data to long for plotting</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
|
||||||
|
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">merge_long</span><span class="op">(</span><span class="va">list</span>, <span class="va">model.names</span><span class="op">)</span></span></code></pre></div>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
|
||||||
|
|
||||||
|
|
||||||
|
<dl><dt id="arg-list">list<a class="anchor" aria-label="anchor" href="#arg-list"></a></dt>
|
||||||
|
<dd><p>a custom regression models list</p></dd>
|
||||||
|
|
||||||
|
|
||||||
|
<dt id="arg-model-names">model.names<a class="anchor" aria-label="anchor" href="#arg-model-names"></a></dt>
|
||||||
|
<dd><p>names of models to include</p></dd>
|
||||||
|
|
||||||
|
</dl></div>
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
|
||||||
|
<p>list</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
</main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>
|
||||||
|
</nav></aside></div>
|
||||||
|
|
||||||
|
|
||||||
|
<footer><div class="pkgdown-footer-left">
|
||||||
|
<p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.1.1.</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="pkgdown-footer-right">
|
||||||
|
<p>Developed by Andreas Gammelgaard Damsbo. Provided without <strong>any warranty</strong>.</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
</footer></div>
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
</body></html>
|
||||||
|
|
||||||
118
reference/outcome_type.html
Normal file
118
reference/outcome_type.html
Normal file
|
|
@ -0,0 +1,118 @@
|
||||||
|
<!DOCTYPE html>
|
||||||
|
<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>Outcome data type assessment — outcome_type • freesearcheR</title><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Montserrat-0.4.9/font.css" rel="stylesheet"><link href="../deps/Public_Sans-0.4.9/font.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet"><meta property="og:title" content="Outcome data type assessment — outcome_type"><meta name="description" content="Outcome data type assessment"><meta property="og:description" content="Outcome data type assessment"></head><body>
|
||||||
|
<a href="#main" class="visually-hidden-focusable">Skip to contents</a>
|
||||||
|
|
||||||
|
|
||||||
|
<nav class="navbar navbar-expand-lg fixed-top bg-primary" data-bs-theme="dark" aria-label="Site navigation"><div class="container">
|
||||||
|
|
||||||
|
<a class="navbar-brand me-2" href="../index.html">freesearcheR</a>
|
||||||
|
|
||||||
|
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">25.2.1</small>
|
||||||
|
|
||||||
|
|
||||||
|
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||||
|
<span class="navbar-toggler-icon"></span>
|
||||||
|
</button>
|
||||||
|
|
||||||
|
<div id="navbar" class="collapse navbar-collapse ms-3">
|
||||||
|
<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
|
||||||
|
<li class="nav-item"><a class="nav-link" href="../ROADMAP.html">Roadmap</a></li>
|
||||||
|
<li class="nav-item"><a class="nav-link" href="../news/index.html">Changelog</a></li>
|
||||||
|
</ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search">
|
||||||
|
<input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li>
|
||||||
|
<li class="nav-item"><a class="external-link nav-link" href="https://github.com/agdamsbo/freesearcheR/" aria-label="GitHub"><span class="fa fab fa-github fa-lg"></span></a></li>
|
||||||
|
</ul></div>
|
||||||
|
|
||||||
|
|
||||||
|
</div>
|
||||||
|
</nav><div class="container template-reference-topic">
|
||||||
|
<div class="row">
|
||||||
|
<main id="main" class="col-md-9"><div class="page-header">
|
||||||
|
|
||||||
|
<h1>Outcome data type assessment</h1>
|
||||||
|
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/freesearcheR/blob/main/R/regression_model.R" class="external-link"><code>R/regression_model.R</code></a></small>
|
||||||
|
<div class="d-none name"><code>outcome_type.Rd</code></div>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="ref-description section level2">
|
||||||
|
<p>Outcome data type assessment</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
|
||||||
|
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">outcome_type</span><span class="op">(</span><span class="va">data</span><span class="op">)</span></span></code></pre></div>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
|
||||||
|
|
||||||
|
|
||||||
|
<dl><dt id="arg-data">data<a class="anchor" aria-label="anchor" href="#arg-data"></a></dt>
|
||||||
|
<dd><p>data</p></dd>
|
||||||
|
|
||||||
|
</dl></div>
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
|
||||||
|
<p>outcome type</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
|
||||||
|
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="va">mtcars</span> <span class="op">|></span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="fu"><a href="default_parsing.html">default_parsing</a></span><span class="op">(</span><span class="op">)</span> <span class="op">|></span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="fu"><a href="https://rdrr.io/r/base/lapply.html" class="external-link">lapply</a></span><span class="op">(</span><span class="va">outcome_type</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $mpg</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "continuous"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $cyl</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "ordinal"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $disp</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "continuous"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $hp</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "continuous"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $drat</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "continuous"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $wt</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "continuous"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $qsec</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "continuous"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $vs</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "dichotomous"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $am</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "dichotomous"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $gear</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "ordinal"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $carb</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "ordinal"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
</code></pre></div>
|
||||||
|
</div>
|
||||||
|
</main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>
|
||||||
|
</nav></aside></div>
|
||||||
|
|
||||||
|
|
||||||
|
<footer><div class="pkgdown-footer-left">
|
||||||
|
<p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.1.1.</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="pkgdown-footer-right">
|
||||||
|
<p>Developed by Andreas Gammelgaard Damsbo. Provided without <strong>any warranty</strong>.</p>
|
||||||
|
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|
||||||
|
|
||||||
|
</footer></div>
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
</body></html>
|
||||||
|
|
||||||
95
reference/plot.tbl_regression.html
Normal file
95
reference/plot.tbl_regression.html
Normal file
|
|
@ -0,0 +1,95 @@
|
||||||
|
<!DOCTYPE html>
|
||||||
|
<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>Regression coef plot from gtsummary. Slightly modified to pass on arguments — plot.tbl_regression • freesearcheR</title><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Montserrat-0.4.9/font.css" rel="stylesheet"><link href="../deps/Public_Sans-0.4.9/font.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet"><meta property="og:title" content="Regression coef plot from gtsummary. Slightly modified to pass on arguments — plot.tbl_regression"><meta name="description" content="Regression coef plot from gtsummary. Slightly modified to pass on arguments"><meta property="og:description" content="Regression coef plot from gtsummary. Slightly modified to pass on arguments"></head><body>
|
||||||
|
<a href="#main" class="visually-hidden-focusable">Skip to contents</a>
|
||||||
|
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|
||||||
|
<nav class="navbar navbar-expand-lg fixed-top bg-primary" data-bs-theme="dark" aria-label="Site navigation"><div class="container">
|
||||||
|
|
||||||
|
<a class="navbar-brand me-2" href="../index.html">freesearcheR</a>
|
||||||
|
|
||||||
|
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">25.2.1</small>
|
||||||
|
|
||||||
|
|
||||||
|
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||||
|
<span class="navbar-toggler-icon"></span>
|
||||||
|
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|
||||||
|
|
||||||
|
<div id="navbar" class="collapse navbar-collapse ms-3">
|
||||||
|
<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
|
||||||
|
<li class="nav-item"><a class="nav-link" href="../ROADMAP.html">Roadmap</a></li>
|
||||||
|
<li class="nav-item"><a class="nav-link" href="../news/index.html">Changelog</a></li>
|
||||||
|
</ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search">
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<input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li>
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|
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|
</ul></div>
|
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|
|
||||||
|
|
||||||
|
</div>
|
||||||
|
</nav><div class="container template-reference-topic">
|
||||||
|
<div class="row">
|
||||||
|
<main id="main" class="col-md-9"><div class="page-header">
|
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|
|
||||||
|
<h1>Regression coef plot from gtsummary. Slightly modified to pass on arguments</h1>
|
||||||
|
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/freesearcheR/blob/main/R/regression_plot.R" class="external-link"><code>R/regression_plot.R</code></a></small>
|
||||||
|
<div class="d-none name"><code>plot.tbl_regression.Rd</code></div>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="ref-description section level2">
|
||||||
|
<p>Regression coef plot from gtsummary. Slightly modified to pass on arguments</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
|
||||||
|
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="co"># S3 method for class 'tbl_regression'</span></span>
|
||||||
|
<span><span class="fu"><a href="https://rdrr.io/r/graphics/plot.default.html" class="external-link">plot</a></span><span class="op">(</span><span class="va">x</span>, <span class="va">...</span><span class="op">)</span></span></code></pre></div>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
|
||||||
|
|
||||||
|
|
||||||
|
<dl><dt id="arg-x">x<a class="anchor" aria-label="anchor" href="#arg-x"></a></dt>
|
||||||
|
<dd><p>(<code>tbl_regression</code>, <code>tbl_uvregression</code>)<br>
|
||||||
|
A 'tbl_regression' or 'tbl_uvregression' object</p></dd>
|
||||||
|
|
||||||
|
|
||||||
|
<dt id="arg--">...<a class="anchor" aria-label="anchor" href="#arg--"></a></dt>
|
||||||
|
<dd><p>arguments passed to <code>ggstats::ggcoef_plot(...)</code></p></dd>
|
||||||
|
|
||||||
|
</dl></div>
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
|
||||||
|
<p>ggplot object</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
|
||||||
|
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="kw">if</span> <span class="op">(</span><span class="cn">FALSE</span><span class="op">)</span> <span class="op">{</span> <span class="co"># \dontrun{</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="va">mod</span> <span class="op"><-</span> <span class="fu"><a href="https://rdrr.io/r/stats/lm.html" class="external-link">lm</a></span><span class="op">(</span><span class="va">mpg</span> <span class="op">~</span> <span class="va">.</span>, <span class="va">mtcars</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="va">p</span> <span class="op"><-</span> <span class="va">mod</span> <span class="op">|></span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="fu">gtsummary</span><span class="fu">::</span><span class="fu"><a href="https://www.danieldsjoberg.com/gtsummary/reference/tbl_regression.html" class="external-link">tbl_regression</a></span><span class="op">(</span><span class="op">)</span> <span class="op">|></span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="fu"><a href="https://rdrr.io/r/graphics/plot.default.html" class="external-link">plot</a></span><span class="op">(</span>colour <span class="op">=</span> <span class="st">"variable"</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="op">}</span> <span class="co"># }</span></span></span>
|
||||||
|
<span class="r-in"><span></span></span>
|
||||||
|
</code></pre></div>
|
||||||
|
</div>
|
||||||
|
</main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>
|
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|
</nav></aside></div>
|
||||||
|
|
||||||
|
|
||||||
|
<footer><div class="pkgdown-footer-left">
|
||||||
|
<p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.1.1.</p>
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|
</div>
|
||||||
|
|
||||||
|
<div class="pkgdown-footer-right">
|
||||||
|
<p>Developed by Andreas Gammelgaard Damsbo. Provided without <strong>any warranty</strong>.</p>
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|
</div>
|
||||||
|
|
||||||
|
</footer></div>
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
</body></html>
|
||||||
|
|
||||||
93
reference/possible_functions.html
Normal file
93
reference/possible_functions.html
Normal file
|
|
@ -0,0 +1,93 @@
|
||||||
|
<!DOCTYPE html>
|
||||||
|
<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>Get possible regression models — possible_functions • freesearcheR</title><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Montserrat-0.4.9/font.css" rel="stylesheet"><link href="../deps/Public_Sans-0.4.9/font.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet"><meta property="og:title" content="Get possible regression models — possible_functions"><meta name="description" content="Get possible regression models"><meta property="og:description" content="Get possible regression models"></head><body>
|
||||||
|
<a href="#main" class="visually-hidden-focusable">Skip to contents</a>
|
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|
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|
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|
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|
<a class="navbar-brand me-2" href="../index.html">freesearcheR</a>
|
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|
|
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|
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">25.2.1</small>
|
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|
|
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|
|
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|
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
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<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
|
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|
<li class="nav-item"><a class="nav-link" href="../ROADMAP.html">Roadmap</a></li>
|
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|
<li class="nav-item"><a class="nav-link" href="../news/index.html">Changelog</a></li>
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|
</ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search">
|
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<input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li>
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<li class="nav-item"><a class="external-link nav-link" href="https://github.com/agdamsbo/freesearcheR/" aria-label="GitHub"><span class="fa fab fa-github fa-lg"></span></a></li>
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|
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<div class="row">
|
||||||
|
<main id="main" class="col-md-9"><div class="page-header">
|
||||||
|
|
||||||
|
<h1>Get possible regression models</h1>
|
||||||
|
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/freesearcheR/blob/main/R/regression_model.R" class="external-link"><code>R/regression_model.R</code></a></small>
|
||||||
|
<div class="d-none name"><code>possible_functions.Rd</code></div>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="ref-description section level2">
|
||||||
|
<p>Get possible regression models</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
|
||||||
|
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">possible_functions</span><span class="op">(</span><span class="va">data</span>, design <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"cross-sectional"</span><span class="op">)</span><span class="op">)</span></span></code></pre></div>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
|
||||||
|
|
||||||
|
|
||||||
|
<dl><dt id="arg-data">data<a class="anchor" aria-label="anchor" href="#arg-data"></a></dt>
|
||||||
|
<dd><p>data</p></dd>
|
||||||
|
|
||||||
|
</dl></div>
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
|
||||||
|
<p>character vector</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
|
||||||
|
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="va">mtcars</span> <span class="op">|></span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="fu"><a href="default_parsing.html">default_parsing</a></span><span class="op">(</span><span class="op">)</span> <span class="op">|></span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="fu">dplyr</span><span class="fu">::</span><span class="fu"><a href="https://dplyr.tidyverse.org/reference/pull.html" class="external-link">pull</a></span><span class="op">(</span><span class="st">"cyl"</span><span class="op">)</span> <span class="op">|></span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="fu">possible_functions</span><span class="op">(</span>design <span class="op">=</span> <span class="st">"cross-sectional"</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "Ordinal logistic regression model"</span>
|
||||||
|
<span class="r-in"><span></span></span>
|
||||||
|
<span class="r-in"><span><span class="va">mtcars</span> <span class="op">|></span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="fu"><a href="default_parsing.html">default_parsing</a></span><span class="op">(</span><span class="op">)</span> <span class="op">|></span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="fu">dplyr</span><span class="fu">::</span><span class="fu"><a href="https://dplyr.tidyverse.org/reference/select.html" class="external-link">select</a></span><span class="op">(</span><span class="st">"cyl"</span><span class="op">)</span> <span class="op">|></span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="fu">possible_functions</span><span class="op">(</span>design <span class="op">=</span> <span class="st">"cross-sectional"</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "Ordinal logistic regression model"</span>
|
||||||
|
</code></pre></div>
|
||||||
|
</div>
|
||||||
|
</main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>
|
||||||
|
</nav></aside></div>
|
||||||
|
|
||||||
|
|
||||||
|
<footer><div class="pkgdown-footer-left">
|
||||||
|
<p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.1.1.</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="pkgdown-footer-right">
|
||||||
|
<p>Developed by Andreas Gammelgaard Damsbo. Provided without <strong>any warranty</strong>.</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
</footer></div>
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
</body></html>
|
||||||
|
|
||||||
|
|
@ -1,5 +1,5 @@
|
||||||
<!DOCTYPE html>
|
<!DOCTYPE html>
|
||||||
<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>Create a regression model programatically — regression_model • freesearcheR</title><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Montserrat-0.4.9/font.css" rel="stylesheet"><link href="../deps/Public_Sans-0.4.9/font.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet"><meta property="og:title" content="Create a regression model programatically — regression_model"><meta name="description" content="Create a regression model programatically"><meta property="og:description" content="Create a regression model programatically"></head><body>
|
<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>Create a regression model programatically — regression_model • freesearcheR</title><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Montserrat-0.4.9/font.css" rel="stylesheet"><link href="../deps/Public_Sans-0.4.9/font.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet"><meta property="og:title" content="Create a regression model programatically — regression_model"><meta name="description" content="Output is a concatenated list of model information and model"><meta property="og:description" content="Output is a concatenated list of model information and model"></head><body>
|
||||||
<a href="#main" class="visually-hidden-focusable">Skip to contents</a>
|
<a href="#main" class="visually-hidden-focusable">Skip to contents</a>
|
||||||
|
|
||||||
|
|
||||||
|
|
@ -35,7 +35,7 @@
|
||||||
</div>
|
</div>
|
||||||
|
|
||||||
<div class="ref-description section level2">
|
<div class="ref-description section level2">
|
||||||
<p>Create a regression model programatically</p>
|
<p>Output is a concatenated list of model information and model</p>
|
||||||
</div>
|
</div>
|
||||||
|
|
||||||
<div class="section level2">
|
<div class="section level2">
|
||||||
|
|
@ -43,12 +43,43 @@
|
||||||
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">regression_model</span><span class="op">(</span></span>
|
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">regression_model</span><span class="op">(</span></span>
|
||||||
<span> <span class="va">data</span>,</span>
|
<span> <span class="va">data</span>,</span>
|
||||||
<span> <span class="va">outcome.str</span>,</span>
|
<span> <span class="va">outcome.str</span>,</span>
|
||||||
<span> auto.mode <span class="op">=</span> <span class="cn">TRUE</span>,</span>
|
<span> auto.mode <span class="op">=</span> <span class="cn">FALSE</span>,</span>
|
||||||
<span> formula.str <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
<span> formula.str <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
||||||
<span> args.list <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
<span> args.list <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
||||||
<span> fun <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
<span> fun <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
||||||
<span> vars <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
<span> vars <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
||||||
<span> <span class="va">...</span></span>
|
<span> <span class="va">...</span></span>
|
||||||
|
<span><span class="op">)</span></span>
|
||||||
|
<span></span>
|
||||||
|
<span><span class="fu">regression_model_uv</span><span class="op">(</span></span>
|
||||||
|
<span> <span class="va">data</span>,</span>
|
||||||
|
<span> <span class="va">outcome.str</span>,</span>
|
||||||
|
<span> args.list <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
||||||
|
<span> fun <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
||||||
|
<span> vars <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
||||||
|
<span> <span class="va">...</span></span>
|
||||||
|
<span><span class="op">)</span></span>
|
||||||
|
<span></span>
|
||||||
|
<span><span class="fu">regression_model_list</span><span class="op">(</span></span>
|
||||||
|
<span> <span class="va">data</span>,</span>
|
||||||
|
<span> <span class="va">outcome.str</span>,</span>
|
||||||
|
<span> <span class="va">fun.descr</span>,</span>
|
||||||
|
<span> fun <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
||||||
|
<span> formula.str <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
||||||
|
<span> args.list <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
||||||
|
<span> vars <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
||||||
|
<span> <span class="va">...</span></span>
|
||||||
|
<span><span class="op">)</span></span>
|
||||||
|
<span></span>
|
||||||
|
<span><span class="fu">regression_model_uv_list</span><span class="op">(</span></span>
|
||||||
|
<span> <span class="va">data</span>,</span>
|
||||||
|
<span> <span class="va">outcome.str</span>,</span>
|
||||||
|
<span> <span class="va">fun.descr</span>,</span>
|
||||||
|
<span> fun <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
||||||
|
<span> formula.str <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
||||||
|
<span> args.list <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
||||||
|
<span> vars <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
||||||
|
<span> <span class="va">...</span></span>
|
||||||
<span><span class="op">)</span></span></code></pre></div>
|
<span><span class="op">)</span></span></code></pre></div>
|
||||||
</div>
|
</div>
|
||||||
|
|
||||||
|
|
@ -57,11 +88,11 @@
|
||||||
|
|
||||||
|
|
||||||
<dl><dt id="arg-data">data<a class="anchor" aria-label="anchor" href="#arg-data"></a></dt>
|
<dl><dt id="arg-data">data<a class="anchor" aria-label="anchor" href="#arg-data"></a></dt>
|
||||||
<dd><p>data set</p></dd>
|
<dd><p>data</p></dd>
|
||||||
|
|
||||||
|
|
||||||
<dt id="arg-outcome-str">outcome.str<a class="anchor" aria-label="anchor" href="#arg-outcome-str"></a></dt>
|
<dt id="arg-outcome-str">outcome.str<a class="anchor" aria-label="anchor" href="#arg-outcome-str"></a></dt>
|
||||||
<dd><p>Name of outcome variable. Character vector.</p></dd>
|
<dd><p>name of outcome variable</p></dd>
|
||||||
|
|
||||||
|
|
||||||
<dt id="arg-auto-mode">auto.mode<a class="anchor" aria-label="anchor" href="#arg-auto-mode"></a></dt>
|
<dt id="arg-auto-mode">auto.mode<a class="anchor" aria-label="anchor" href="#arg-auto-mode"></a></dt>
|
||||||
|
|
@ -69,15 +100,16 @@
|
||||||
|
|
||||||
|
|
||||||
<dt id="arg-formula-str">formula.str<a class="anchor" aria-label="anchor" href="#arg-formula-str"></a></dt>
|
<dt id="arg-formula-str">formula.str<a class="anchor" aria-label="anchor" href="#arg-formula-str"></a></dt>
|
||||||
<dd><p>Formula as string. Passed through 'glue::glue'. If given, 'outcome.str' and 'vars' are ignored. Optional.</p></dd>
|
<dd><p>custom formula glue string. Default is NULL.</p></dd>
|
||||||
|
|
||||||
|
|
||||||
<dt id="arg-args-list">args.list<a class="anchor" aria-label="anchor" href="#arg-args-list"></a></dt>
|
<dt id="arg-args-list">args.list<a class="anchor" aria-label="anchor" href="#arg-args-list"></a></dt>
|
||||||
<dd><p>List of arguments passed to 'fun' with 'do.call'.</p></dd>
|
<dd><p>custom character string to be converted using
|
||||||
|
argsstring2list() or list of arguments. Default is NULL.</p></dd>
|
||||||
|
|
||||||
|
|
||||||
<dt id="arg-fun">fun<a class="anchor" aria-label="anchor" href="#arg-fun"></a></dt>
|
<dt id="arg-fun">fun<a class="anchor" aria-label="anchor" href="#arg-fun"></a></dt>
|
||||||
<dd><p>Name of function as character vector or function to use for model creation.</p></dd>
|
<dd><p>name of custom function. Default is NULL.</p></dd>
|
||||||
|
|
||||||
|
|
||||||
<dt id="arg-vars">vars<a class="anchor" aria-label="anchor" href="#arg-vars"></a></dt>
|
<dt id="arg-vars">vars<a class="anchor" aria-label="anchor" href="#arg-vars"></a></dt>
|
||||||
|
|
@ -85,12 +117,20 @@
|
||||||
|
|
||||||
|
|
||||||
<dt id="arg--">...<a class="anchor" aria-label="anchor" href="#arg--"></a></dt>
|
<dt id="arg--">...<a class="anchor" aria-label="anchor" href="#arg--"></a></dt>
|
||||||
<dd><p>ignored for now</p></dd>
|
<dd><p>ignored</p></dd>
|
||||||
|
|
||||||
|
|
||||||
|
<dt id="arg-fun-descr">fun.descr<a class="anchor" aria-label="anchor" href="#arg-fun-descr"></a></dt>
|
||||||
|
<dd><p>Description of chosen function matching description in
|
||||||
|
"supported_functions()"</p></dd>
|
||||||
|
|
||||||
</dl></div>
|
</dl></div>
|
||||||
<div class="section level2">
|
<div class="section level2">
|
||||||
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
|
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
|
||||||
<p>object of standard class for fun</p>
|
<p>object of standard class for fun</p>
|
||||||
|
<p>object of standard class for fun</p>
|
||||||
|
<p>list</p>
|
||||||
|
<p>list</p>
|
||||||
</div>
|
</div>
|
||||||
|
|
||||||
<div class="section level2">
|
<div class="section level2">
|
||||||
|
|
@ -524,12 +564,14 @@
|
||||||
<span class="r-out co"><span class="r-pr">#></span> gradeII gradeIII response death ttdeath </span>
|
<span class="r-out co"><span class="r-pr">#></span> gradeII gradeIII response death ttdeath </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 0.1750 1.6855 4.9885 3.0775 -0.1394 </span>
|
<span class="r-out co"><span class="r-pr">#></span> 0.1750 1.6855 4.9885 3.0775 -0.1394 </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
<span class="r-in"><span><span class="fu">gtsummary</span><span class="fu">::</span><span class="va"><a href="https://www.danieldsjoberg.com/gtsummary/reference/trial.html" class="external-link">trial</a></span> <span class="op">|></span> <span class="fu">regression_model</span><span class="op">(</span></span></span>
|
<span class="r-in"><span><span class="fu">gtsummary</span><span class="fu">::</span><span class="va"><a href="https://www.danieldsjoberg.com/gtsummary/reference/trial.html" class="external-link">trial</a></span> <span class="op">|></span></span></span>
|
||||||
<span class="r-in"><span> outcome.str <span class="op">=</span> <span class="st">"trt"</span>,</span></span>
|
<span class="r-in"><span> <span class="fu"><a href="default_parsing.html">default_parsing</a></span><span class="op">(</span><span class="op">)</span> <span class="op">|></span></span></span>
|
||||||
<span class="r-in"><span> auto.mode <span class="op">=</span> <span class="cn">FALSE</span>,</span></span>
|
<span class="r-in"><span> <span class="fu">regression_model</span><span class="op">(</span></span></span>
|
||||||
<span class="r-in"><span> fun <span class="op">=</span> <span class="st">"stats::glm"</span>,</span></span>
|
<span class="r-in"><span> outcome.str <span class="op">=</span> <span class="st">"trt"</span>,</span></span>
|
||||||
<span class="r-in"><span> args.list <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/list.html" class="external-link">list</a></span><span class="op">(</span>family <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/stats/family.html" class="external-link">binomial</a></span><span class="op">(</span>link <span class="op">=</span> <span class="st">"logit"</span><span class="op">)</span><span class="op">)</span></span></span>
|
<span class="r-in"><span> auto.mode <span class="op">=</span> <span class="cn">FALSE</span>,</span></span>
|
||||||
<span class="r-in"><span><span class="op">)</span></span></span>
|
<span class="r-in"><span> fun <span class="op">=</span> <span class="st">"stats::glm"</span>,</span></span>
|
||||||
|
<span class="r-in"><span> args.list <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/list.html" class="external-link">list</a></span><span class="op">(</span>family <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/stats/family.html" class="external-link">binomial</a></span><span class="op">(</span>link <span class="op">=</span> <span class="st">"logit"</span><span class="op">)</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="op">)</span></span></span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> Call: (function (formula, family = gaussian, data, weights, subset, </span>
|
<span class="r-out co"><span class="r-pr">#></span> Call: (function (formula, family = gaussian, data, weights, subset, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> na.action, start = NULL, etastart, mustart, offset, control = list(...), </span>
|
<span class="r-out co"><span class="r-pr">#></span> na.action, start = NULL, etastart, mustart, offset, control = list(...), </span>
|
||||||
|
|
@ -765,35 +807,36 @@
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 1L, 1L, 1L, 3L, 1L, 1L, 2L, 1L, 1L, 3L, 3L, 1L, 3L, 2L, 1L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 1L, 1L, 1L, 3L, 1L, 1L, 2L, 1L, 1L, 3L, 3L, 1L, 3L, 2L, 1L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 3L, 1L, 2L, 1L, 1L, 3L, 1L, 2L, 1L, 2L, 2L, 2L, 3L, 2L, 2L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 3L, 1L, 2L, 1L, 1L, 3L, 1L, 2L, 1L, 2L, 2L, 2L, 3L, 2L, 2L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 3L, 2L, 3L, 3L, 2L, 1L, 2L, 3L, 3L, 1L), levels = c("I", </span>
|
<span class="r-out co"><span class="r-pr">#></span> 3L, 2L, 3L, 3L, 2L, 1L, 2L, 3L, 3L, 1L), levels = c("I", </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> "II", "III"), class = "factor", label = "Grade"), response = structure(c(0L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> "II", "III"), class = "factor", label = "Grade"), response = structure(c(1L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 1L, 0L, 1L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 2L, 1L, 2L, 2L, 1L, 1L, 1L, 1L, 1L, 1L, 2L, 1L, 1L, 1L, 1L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 1L, 1L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 2L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 2L, 1L, 1L, 2L, 2L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 0L, 0L, 1L, 0L, NA, 0L, 1L, 0L, 0L, 0L, 1L, 0L, 1L, 1L, 1L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 1L, 1L, 2L, 1L, NA, 1L, 2L, 1L, 1L, 1L, 2L, 1L, 2L, 2L, 2L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 1L, 1L, 0L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 2L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 2L, 1L, 2L, 2L, 1L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 0L, 0L, 0L, NA, 0L, 1L, 1L, 0L, 0L, 1L, 0L, 0L, 0L, 1L, 0L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 1L, 1L, 1L, NA, 1L, 2L, 2L, 1L, 1L, 2L, 1L, 1L, 1L, 2L, 1L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 1L, 0L, 1L, 0L, 0L, 0L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 1L, 1L, 1L, 1L, 1L, 2L, 1L, 1L, 1L, 2L, 1L, 2L, 1L, 1L, 1L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 0L, 1L, 1L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, NA, 0L, 0L, 1L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 1L, 2L, 2L, 2L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, NA, 1L, 1L, 2L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 0L, 0L, 0L, 0L, 1L, 1L, 0L, 0L, 1L, 1L, 0L, 0L, 0L, 0L, 1L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 1L, 1L, 1L, 1L, 2L, 2L, 1L, 1L, 2L, 2L, 1L, 1L, 1L, 1L, 2L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 0L, 0L, 0L, 0L, 1L, 1L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 1L, 0L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 1L, 1L, 1L, 1L, 2L, 2L, 1L, 1L, 1L, 2L, 1L, 1L, 1L, 2L, 1L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 1L, 1L, NA, 1L, 1L, 1L, 0L, 1L, 0L, 0L, 1L, 0L, NA, 1L, 0L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 2L, 2L, NA, 2L, 2L, 2L, 1L, 2L, 1L, 1L, 2L, 1L, NA, 2L, 1L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 1L, 1L, 0L, 0L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 2L, 1L, 1L, 2L, 2L, 1L, 1L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 0L, 1L, 0L, 1L, 0L, 1L, 0L, 1L, 1L, 1L, 0L, 1L, NA, 0L, 1L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 1L, 2L, 1L, 2L, 1L, 2L, 1L, 2L, 2L, 2L, 1L, 2L, NA, 1L, 2L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 0L, 0L, 1L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, NA, 0L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 1L, 1L, 2L, 1L, 2L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, NA, 1L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 1L, 1L, 0L, 0L), label = "Tumor Response"), death = structure(c(0L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 2L, 2L, 1L, 1L), levels = c("0", "1"), class = "factor", label = "Tumor Response"), </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 0L, 0L, 1L, 1L, 1L, 0L, 1L, 0L, 1L, 0L, 0L, 1L, 1L, 1L, 1L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> death = structure(c(1L, 1L, 1L, 2L, 2L, 2L, 1L, 2L, 1L, 2L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 0L, 1L, 0L, 0L, 0L, 0L, 1L, 1L, 1L, 1L, 0L, 0L, 1L, 1L, 0L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 1L, 1L, 2L, 2L, 2L, 2L, 1L, 2L, 1L, 1L, 1L, 1L, 2L, 2L, 2L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 1L, 0L, 0L, 0L, 1L, 1L, 0L, 1L, 1L, 1L, 1L, 1L, 0L, 1L, 0L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 2L, 1L, 1L, 2L, 2L, 1L, 2L, 1L, 1L, 1L, 2L, 2L, 1L, 2L, 2L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 0L, 0L, 1L, 1L, 1L, 1L, 0L, 0L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 2L, 2L, 2L, 1L, 2L, 1L, 1L, 1L, 2L, 2L, 2L, 2L, 1L, 1L, 2L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 0L, 1L, 0L, 0L, 1L, 0L, 1L, 1L, 1L, 0L, 0L, 0L, 0L, 0L, 1L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 2L, 2L, 2L, 2L, 2L, 2L, 1L, 2L, 1L, 1L, 2L, 1L, 2L, 2L, 2L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 1L, 1L, 1L, 0L, 1L, 0L, 0L, 0L, 1L, 1L, 0L, 1L, 1L, 1L, 1L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 1L, 1L, 1L, 1L, 1L, 2L, 2L, 2L, 2L, 1L, 2L, 1L, 1L, 1L, 2L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 1L, 1L, 0L, 0L, 1L, 1L, 0L, 1L, 1L, 1L, 0L, 0L, 0L, 1L, 1L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 2L, 1L, 2L, 2L, 2L, 2L, 2L, 2L, 1L, 1L, 2L, 2L, 1L, 2L, 2L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 1L, 1L, 0L, 1L, 1L, 0L, 1L, 1L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 2L, 1L, 1L, 1L, 2L, 2L, 2L, 2L, 1L, 2L, 2L, 1L, 2L, 2L, 1L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 0L, 1L, 1L, 1L, 0L, 1L, 1L, 1L, 1L, 0L, 0L, 1L, 1L, 0L, 1L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 1L, 2L, 1L, 1L, 1L, 1L, 1L, 2L, 2L, 2L, 1L, 2L, 2L, 2L, 2L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 0L, 0L, 1L, 1L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 1L, 1L, 0L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 1L, 1L, 2L, 2L, 1L, 2L, 1L, 1L, 2L, 2L, 1L, 1L, 1L, 1L, 2L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 0L, 1L, 1L, 1L, 0L, 1L, 1L, 1L, 0L, 0L, 0L, 0L, 1L, 0L, 1L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 1L, 1L, 1L, 2L, 2L, 1L, 1L, 2L, 2L, 2L, 1L, 2L, 2L, 2L, 1L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 1L, 1L, 1L, 1L, 1L, 0L, 0L, 0L, 1L, 0L, 1L, 0L, 1L, 1L, 1L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 1L, 1L, 1L, 2L, 1L, 2L, 2L, 2L, 2L, 2L, 2L, 1L, 1L, 1L, 2L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 0L, 1L, 1L, 0L, 0L, 1L, 1L, 1L, 1L, 0L, 1L, 0L, 1L, 1L, 0L, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 1L, 2L, 1L, 2L, 2L, 2L, 1L, 2L, 2L, 1L, 1L, 2L, 2L, 2L, 2L, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 1L, 0L, 1L, 0L), label = "Patient Died"), ttdeath = structure(c(24, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 1L, 2L, 1L, 2L, 2L, 1L, 2L, 1L, 2L, 1L), levels = c("0", </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> "1"), class = "factor", label = "Patient Died"), ttdeath = structure(c(24, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 24, 24, 17.64, 16.43, 15.64, 24, 18.43, 24, 10.53, 24, 24, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 24, 24, 17.64, 16.43, 15.64, 24, 18.43, 24, 10.53, 24, 24, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 14.34, 12.89, 22.68, 8.71, 24, 15.21, 24, 24, 24, 24, 16.92, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 14.34, 12.89, 22.68, 8.71, 24, 15.21, 24, 24, 24, 24, 16.92, </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 23.89, 6.32, 15.77, 24, 24, 15.45, 17.43, 24, 20.9, 24, 24, </span>
|
<span class="r-out co"><span class="r-pr">#></span> 23.89, 6.32, 15.77, 24, 24, 15.45, 17.43, 24, 20.9, 24, 24, </span>
|
||||||
|
|
@ -818,13 +861,80 @@
|
||||||
<span class="r-out co"><span class="r-pr">#></span> Coefficients:</span>
|
<span class="r-out co"><span class="r-pr">#></span> Coefficients:</span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> (Intercept) age marker stageT2 stageT3 stageT4 </span>
|
<span class="r-out co"><span class="r-pr">#></span> (Intercept) age marker stageT2 stageT3 stageT4 </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> 1.652845 -0.002014 -0.259849 0.404341 0.117402 -0.002102 </span>
|
<span class="r-out co"><span class="r-pr">#></span> 1.652845 -0.002014 -0.259849 0.404341 0.117402 -0.002102 </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> gradeII gradeIII response death ttdeath </span>
|
<span class="r-out co"><span class="r-pr">#></span> gradeII gradeIII response1 death1 ttdeath </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> -0.037012 0.022890 0.498952 -0.003916 -0.076073 </span>
|
<span class="r-out co"><span class="r-pr">#></span> -0.037012 0.022890 0.498952 -0.003916 -0.076073 </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> </span>
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> Degrees of Freedom: 172 Total (i.e. Null); 162 Residual</span>
|
<span class="r-out co"><span class="r-pr">#></span> Degrees of Freedom: 172 Total (i.e. Null); 162 Residual</span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> (27 observations deleted due to missingness)</span>
|
<span class="r-out co"><span class="r-pr">#></span> (27 observations deleted due to missingness)</span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> Null Deviance: 239.5 </span>
|
<span class="r-out co"><span class="r-pr">#></span> Null Deviance: 239.5 </span>
|
||||||
<span class="r-out co"><span class="r-pr">#></span> Residual Deviance: 230.9 AIC: 252.9</span>
|
<span class="r-out co"><span class="r-pr">#></span> Residual Deviance: 230.9 AIC: 252.9</span>
|
||||||
|
<span class="r-in"><span><span class="va">m</span> <span class="op"><-</span> <span class="va">mtcars</span> <span class="op">|></span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="fu"><a href="default_parsing.html">default_parsing</a></span><span class="op">(</span><span class="op">)</span> <span class="op">|></span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="fu">regression_model</span><span class="op">(</span></span></span>
|
||||||
|
<span class="r-in"><span> outcome.str <span class="op">=</span> <span class="st">"mpg"</span>,</span></span>
|
||||||
|
<span class="r-in"><span> auto.mode <span class="op">=</span> <span class="cn">FALSE</span>,</span></span>
|
||||||
|
<span class="r-in"><span> fun <span class="op">=</span> <span class="st">"stats::lm"</span>,</span></span>
|
||||||
|
<span class="r-in"><span> formula.str <span class="op">=</span> <span class="st">"{outcome.str}~{paste(vars,collapse='+')}"</span>,</span></span>
|
||||||
|
<span class="r-in"><span> args.list <span class="op">=</span> <span class="cn">NULL</span>,</span></span>
|
||||||
|
<span class="r-in"><span> vars <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"mpg"</span>, <span class="st">"cyl"</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="op">)</span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="fu">broom</span><span class="fu">::</span><span class="fu"><a href="https://generics.r-lib.org/reference/tidy.html" class="external-link">tidy</a></span><span class="op">(</span><span class="va">m</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># A tibble: 3 × 5</span></span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> term estimate std.error statistic p.value</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span></span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">1</span> (Intercept) 26.7 0.972 27.4 2.69<span style="color: #949494;">e</span><span style="color: #BB0000;">-22</span></span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">2</span> cyl6 -<span style="color: #BB0000;">6.92</span> 1.56 -<span style="color: #BB0000;">4.44</span> 1.19<span style="color: #949494;">e</span><span style="color: #BB0000;">- 4</span></span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">3</span> cyl8 -<span style="color: #BB0000;">11.6</span> 1.30 -<span style="color: #BB0000;">8.90</span> 8.57<span style="color: #949494;">e</span><span style="color: #BB0000;">-10</span></span>
|
||||||
|
<span class="r-in"><span><span class="kw">if</span> <span class="op">(</span><span class="cn">FALSE</span><span class="op">)</span> <span class="op">{</span> <span class="co"># \dontrun{</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="fu">gtsummary</span><span class="fu">::</span><span class="va"><a href="https://www.danieldsjoberg.com/gtsummary/reference/trial.html" class="external-link">trial</a></span> <span class="op">|></span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="fu">regression_model_uv</span><span class="op">(</span>outcome.str <span class="op">=</span> <span class="st">"age"</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="fu">gtsummary</span><span class="fu">::</span><span class="va"><a href="https://www.danieldsjoberg.com/gtsummary/reference/trial.html" class="external-link">trial</a></span> <span class="op">|></span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="fu">regression_model_uv</span><span class="op">(</span></span></span>
|
||||||
|
<span class="r-in"><span> outcome.str <span class="op">=</span> <span class="st">"age"</span>,</span></span>
|
||||||
|
<span class="r-in"><span> fun <span class="op">=</span> <span class="st">"stats::lm"</span>,</span></span>
|
||||||
|
<span class="r-in"><span> args.list <span class="op">=</span> <span class="cn">NULL</span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="op">)</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="va">m</span> <span class="op"><-</span> <span class="fu">gtsummary</span><span class="fu">::</span><span class="va"><a href="https://www.danieldsjoberg.com/gtsummary/reference/trial.html" class="external-link">trial</a></span> <span class="op">|></span> <span class="fu">regression_model_uv</span><span class="op">(</span></span></span>
|
||||||
|
<span class="r-in"><span> outcome.str <span class="op">=</span> <span class="st">"trt"</span>,</span></span>
|
||||||
|
<span class="r-in"><span> fun <span class="op">=</span> <span class="st">"stats::glm"</span>,</span></span>
|
||||||
|
<span class="r-in"><span> args.list <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/list.html" class="external-link">list</a></span><span class="op">(</span>family <span class="op">=</span> <span class="fu">stats</span><span class="fu">::</span><span class="fu"><a href="https://rdrr.io/r/stats/family.html" class="external-link">binomial</a></span><span class="op">(</span>link <span class="op">=</span> <span class="st">"logit"</span><span class="op">)</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/lapply.html" class="external-link">lapply</a></span><span class="op">(</span><span class="va">m</span>,<span class="fu">broom</span><span class="fu">::</span><span class="va"><a href="https://generics.r-lib.org/reference/tidy.html" class="external-link">tidy</a></span><span class="op">)</span> <span class="op">|></span> <span class="fu">dplyr</span><span class="fu">::</span><span class="fu"><a href="https://dplyr.tidyverse.org/reference/bind_rows.html" class="external-link">bind_rows</a></span><span class="op">(</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="op">}</span> <span class="co"># }</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="kw">if</span> <span class="op">(</span><span class="cn">FALSE</span><span class="op">)</span> <span class="op">{</span> <span class="co"># \dontrun{</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="fu">gtsummary</span><span class="fu">::</span><span class="va"><a href="https://www.danieldsjoberg.com/gtsummary/reference/trial.html" class="external-link">trial</a></span> <span class="op">|></span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="fu">regression_model</span><span class="op">(</span></span></span>
|
||||||
|
<span class="r-in"><span> outcome.str <span class="op">=</span> <span class="st">"age"</span>,</span></span>
|
||||||
|
<span class="r-in"><span> fun <span class="op">=</span> <span class="st">"stats::lm"</span>,</span></span>
|
||||||
|
<span class="r-in"><span> formula.str <span class="op">=</span> <span class="st">"{outcome.str}~."</span>,</span></span>
|
||||||
|
<span class="r-in"><span> args.list <span class="op">=</span> <span class="cn">NULL</span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="op">)</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="va">ls</span> <span class="op"><-</span> <span class="fu">regression_model_list</span><span class="op">(</span>data <span class="op">=</span> <span class="fu"><a href="default_parsing.html">default_parsing</a></span><span class="op">(</span><span class="va">mtcars</span><span class="op">)</span>, outcome.str <span class="op">=</span> <span class="st">"cyl"</span>, fun.descr <span class="op">=</span> <span class="st">"Ordinal logistic regression model"</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/summary.html" class="external-link">summary</a></span><span class="op">(</span><span class="va">ls</span><span class="op">$</span><span class="va">model</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-in"><span></span></span>
|
||||||
|
<span class="r-in"><span><span class="va">ls</span> <span class="op"><-</span> <span class="fu">regression_model_list</span><span class="op">(</span>data <span class="op">=</span> <span class="fu"><a href="default_parsing.html">default_parsing</a></span><span class="op">(</span><span class="fu">gtsummary</span><span class="fu">::</span><span class="va"><a href="https://www.danieldsjoberg.com/gtsummary/reference/trial.html" class="external-link">trial</a></span><span class="op">)</span>, outcome.str <span class="op">=</span> <span class="st">"trt"</span>, fun.descr <span class="op">=</span> <span class="st">"Logistic regression model"</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="va">tbl</span> <span class="op"><-</span> <span class="fu">gtsummary</span><span class="fu">::</span><span class="fu"><a href="https://www.danieldsjoberg.com/gtsummary/reference/tbl_regression.html" class="external-link">tbl_regression</a></span><span class="op">(</span><span class="va">ls</span><span class="op">$</span><span class="va">model</span>, exponentiate <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="va">m</span> <span class="op"><-</span> <span class="fu">gtsummary</span><span class="fu">::</span><span class="va"><a href="https://www.danieldsjoberg.com/gtsummary/reference/trial.html" class="external-link">trial</a></span> <span class="op">|></span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="fu"><a href="default_parsing.html">default_parsing</a></span><span class="op">(</span><span class="op">)</span> <span class="op">|></span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="fu">regression_model</span><span class="op">(</span></span></span>
|
||||||
|
<span class="r-in"><span> outcome.str <span class="op">=</span> <span class="st">"trt"</span>,</span></span>
|
||||||
|
<span class="r-in"><span> fun <span class="op">=</span> <span class="st">"stats::glm"</span>,</span></span>
|
||||||
|
<span class="r-in"><span> formula.str <span class="op">=</span> <span class="st">"{outcome.str}~."</span>,</span></span>
|
||||||
|
<span class="r-in"><span> args.list <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/list.html" class="external-link">list</a></span><span class="op">(</span>family <span class="op">=</span> <span class="fu">stats</span><span class="fu">::</span><span class="fu"><a href="https://rdrr.io/r/stats/family.html" class="external-link">binomial</a></span><span class="op">(</span>link <span class="op">=</span> <span class="st">"logit"</span><span class="op">)</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-in"><span> <span class="op">)</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="va">tbl2</span> <span class="op"><-</span> <span class="fu">gtsummary</span><span class="fu">::</span><span class="fu"><a href="https://www.danieldsjoberg.com/gtsummary/reference/tbl_regression.html" class="external-link">tbl_regression</a></span><span class="op">(</span><span class="va">m</span>, exponentiate <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="fu">broom</span><span class="fu">::</span><span class="fu"><a href="https://generics.r-lib.org/reference/tidy.html" class="external-link">tidy</a></span><span class="op">(</span><span class="va">ls</span><span class="op">$</span><span class="va">model</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="fu">broom</span><span class="fu">::</span><span class="fu"><a href="https://generics.r-lib.org/reference/tidy.html" class="external-link">tidy</a></span><span class="op">(</span><span class="va">m</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="op">}</span> <span class="co"># }</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="kw">if</span> <span class="op">(</span><span class="cn">FALSE</span><span class="op">)</span> <span class="op">{</span> <span class="co"># \dontrun{</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="fu">gtsummary</span><span class="fu">::</span><span class="va"><a href="https://www.danieldsjoberg.com/gtsummary/reference/trial.html" class="external-link">trial</a></span> <span class="op">|></span> <span class="fu">regression_model_uv</span><span class="op">(</span></span></span>
|
||||||
|
<span class="r-in"><span> outcome.str <span class="op">=</span> <span class="st">"trt"</span>,</span></span>
|
||||||
|
<span class="r-in"><span> fun <span class="op">=</span> <span class="st">"stats::glm"</span>,</span></span>
|
||||||
|
<span class="r-in"><span> args.list <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/list.html" class="external-link">list</a></span><span class="op">(</span>family <span class="op">=</span> <span class="fu">stats</span><span class="fu">::</span><span class="fu"><a href="https://rdrr.io/r/stats/family.html" class="external-link">binomial</a></span><span class="op">(</span>link <span class="op">=</span> <span class="st">"logit"</span><span class="op">)</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="op">)</span> <span class="op">|></span> <span class="fu"><a href="https://rdrr.io/r/base/lapply.html" class="external-link">lapply</a></span><span class="op">(</span><span class="fu">broom</span><span class="fu">::</span><span class="va"><a href="https://generics.r-lib.org/reference/tidy.html" class="external-link">tidy</a></span><span class="op">)</span> <span class="op">|></span> <span class="fu">dplyr</span><span class="fu">::</span><span class="fu"><a href="https://dplyr.tidyverse.org/reference/bind_rows.html" class="external-link">bind_rows</a></span><span class="op">(</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="va">ms</span> <span class="op"><-</span> <span class="fu">regression_model_uv_list</span><span class="op">(</span>data <span class="op">=</span> <span class="fu"><a href="default_parsing.html">default_parsing</a></span><span class="op">(</span><span class="va">mtcars</span><span class="op">)</span>, outcome.str <span class="op">=</span> <span class="st">"mpg"</span>, fun.descr <span class="op">=</span> <span class="st">"Linear regression model"</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/lapply.html" class="external-link">lapply</a></span><span class="op">(</span><span class="va">ms</span><span class="op">$</span><span class="va">model</span>,<span class="fu">broom</span><span class="fu">::</span><span class="va"><a href="https://generics.r-lib.org/reference/tidy.html" class="external-link">tidy</a></span><span class="op">)</span> <span class="op">|></span> <span class="fu">dplyr</span><span class="fu">::</span><span class="fu"><a href="https://dplyr.tidyverse.org/reference/bind_rows.html" class="external-link">bind_rows</a></span><span class="op">(</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-in"><span><span class="op">}</span> <span class="co"># }</span></span></span>
|
||||||
</code></pre></div>
|
</code></pre></div>
|
||||||
</div>
|
</div>
|
||||||
</main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>
|
</main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>
|
||||||
|
|
|
||||||
8
reference/regression_model_list.html
Normal file
8
reference/regression_model_list.html
Normal file
|
|
@ -0,0 +1,8 @@
|
||||||
|
<html>
|
||||||
|
<head>
|
||||||
|
<meta http-equiv="refresh" content="0;URL=https://agdamsbo.github.io/freesearcheR/reference/regression_model.html" />
|
||||||
|
<meta name="robots" content="noindex">
|
||||||
|
<link rel="canonical" href="https://agdamsbo.github.io/freesearcheR/reference/regression_model.html">
|
||||||
|
</head>
|
||||||
|
</html>
|
||||||
|
|
||||||
|
|
@ -1,124 +1,8 @@
|
||||||
<!DOCTYPE html>
|
<html>
|
||||||
<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>Create a regression model programatically — regression_model_uv • freesearcheR</title><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Montserrat-0.4.9/font.css" rel="stylesheet"><link href="../deps/Public_Sans-0.4.9/font.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet"><meta property="og:title" content="Create a regression model programatically — regression_model_uv"><meta name="description" content="Create a regression model programatically"><meta property="og:description" content="Create a regression model programatically"></head><body>
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<head>
|
||||||
<a href="#main" class="visually-hidden-focusable">Skip to contents</a>
|
<meta http-equiv="refresh" content="0;URL=https://agdamsbo.github.io/freesearcheR/reference/regression_model.html" />
|
||||||
|
<meta name="robots" content="noindex">
|
||||||
|
<link rel="canonical" href="https://agdamsbo.github.io/freesearcheR/reference/regression_model.html">
|
||||||
<nav class="navbar navbar-expand-lg fixed-top bg-primary" data-bs-theme="dark" aria-label="Site navigation"><div class="container">
|
</head>
|
||||||
|
</html>
|
||||||
<a class="navbar-brand me-2" href="../index.html">freesearcheR</a>
|
|
||||||
|
|
||||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">25.2.1</small>
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|
||||||
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|
||||||
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|
||||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
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|
||||||
<span class="navbar-toggler-icon"></span>
|
|
||||||
</button>
|
|
||||||
|
|
||||||
<div id="navbar" class="collapse navbar-collapse ms-3">
|
|
||||||
<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
|
|
||||||
<li class="nav-item"><a class="nav-link" href="../ROADMAP.html">Roadmap</a></li>
|
|
||||||
<li class="nav-item"><a class="nav-link" href="../news/index.html">Changelog</a></li>
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|
||||||
</ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search">
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|
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<input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li>
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<li class="nav-item"><a class="external-link nav-link" href="https://github.com/agdamsbo/freesearcheR/" aria-label="GitHub"><span class="fa fab fa-github fa-lg"></span></a></li>
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</ul></div>
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|
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|
||||||
</div>
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|
||||||
</nav><div class="container template-reference-topic">
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|
||||||
<div class="row">
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|
||||||
<main id="main" class="col-md-9"><div class="page-header">
|
|
||||||
|
|
||||||
<h1>Create a regression model programatically</h1>
|
|
||||||
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/freesearcheR/blob/main/R/regression_model.R" class="external-link"><code>R/regression_model.R</code></a></small>
|
|
||||||
<div class="d-none name"><code>regression_model_uv.Rd</code></div>
|
|
||||||
</div>
|
|
||||||
|
|
||||||
<div class="ref-description section level2">
|
|
||||||
<p>Create a regression model programatically</p>
|
|
||||||
</div>
|
|
||||||
|
|
||||||
<div class="section level2">
|
|
||||||
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
|
|
||||||
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">regression_model_uv</span><span class="op">(</span></span>
|
|
||||||
<span> <span class="va">data</span>,</span>
|
|
||||||
<span> <span class="va">outcome.str</span>,</span>
|
|
||||||
<span> args.list <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
|
||||||
<span> fun <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
|
||||||
<span> vars <span class="op">=</span> <span class="cn">NULL</span>,</span>
|
|
||||||
<span> <span class="va">...</span></span>
|
|
||||||
<span><span class="op">)</span></span></code></pre></div>
|
|
||||||
</div>
|
|
||||||
|
|
||||||
<div class="section level2">
|
|
||||||
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
|
|
||||||
|
|
||||||
|
|
||||||
<dl><dt id="arg-data">data<a class="anchor" aria-label="anchor" href="#arg-data"></a></dt>
|
|
||||||
<dd><p>data set</p></dd>
|
|
||||||
|
|
||||||
|
|
||||||
<dt id="arg-outcome-str">outcome.str<a class="anchor" aria-label="anchor" href="#arg-outcome-str"></a></dt>
|
|
||||||
<dd><p>Name of outcome variable. Character vector.</p></dd>
|
|
||||||
|
|
||||||
|
|
||||||
<dt id="arg-args-list">args.list<a class="anchor" aria-label="anchor" href="#arg-args-list"></a></dt>
|
|
||||||
<dd><p>List of arguments passed to 'fun' with 'do.call'.</p></dd>
|
|
||||||
|
|
||||||
|
|
||||||
<dt id="arg-fun">fun<a class="anchor" aria-label="anchor" href="#arg-fun"></a></dt>
|
|
||||||
<dd><p>Name of function as character vector or function to use for model creation.</p></dd>
|
|
||||||
|
|
||||||
|
|
||||||
<dt id="arg-vars">vars<a class="anchor" aria-label="anchor" href="#arg-vars"></a></dt>
|
|
||||||
<dd><p>character vector of variables to include</p></dd>
|
|
||||||
|
|
||||||
|
|
||||||
<dt id="arg--">...<a class="anchor" aria-label="anchor" href="#arg--"></a></dt>
|
|
||||||
<dd><p>ignored for now</p></dd>
|
|
||||||
|
|
||||||
</dl></div>
|
|
||||||
<div class="section level2">
|
|
||||||
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
|
|
||||||
<p>object of standard class for fun</p>
|
|
||||||
</div>
|
|
||||||
|
|
||||||
<div class="section level2">
|
|
||||||
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
|
|
||||||
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="kw">if</span> <span class="op">(</span><span class="cn">FALSE</span><span class="op">)</span> <span class="op">{</span> <span class="co"># \dontrun{</span></span></span>
|
|
||||||
<span class="r-in"><span><span class="fu">gtsummary</span><span class="fu">::</span><span class="va"><a href="https://www.danieldsjoberg.com/gtsummary/reference/trial.html" class="external-link">trial</a></span> <span class="op">|></span></span></span>
|
|
||||||
<span class="r-in"><span> <span class="fu">regression_model_uv</span><span class="op">(</span>outcome.str <span class="op">=</span> <span class="st">"age"</span><span class="op">)</span></span></span>
|
|
||||||
<span class="r-in"><span><span class="fu">gtsummary</span><span class="fu">::</span><span class="va"><a href="https://www.danieldsjoberg.com/gtsummary/reference/trial.html" class="external-link">trial</a></span> <span class="op">|></span></span></span>
|
|
||||||
<span class="r-in"><span> <span class="fu">regression_model_uv</span><span class="op">(</span></span></span>
|
|
||||||
<span class="r-in"><span> outcome.str <span class="op">=</span> <span class="st">"age"</span>,</span></span>
|
|
||||||
<span class="r-in"><span> fun <span class="op">=</span> <span class="st">"stats::lm"</span>,</span></span>
|
|
||||||
<span class="r-in"><span> args.list <span class="op">=</span> <span class="cn">NULL</span></span></span>
|
|
||||||
<span class="r-in"><span> <span class="op">)</span></span></span>
|
|
||||||
<span class="r-in"><span><span class="fu">gtsummary</span><span class="fu">::</span><span class="va"><a href="https://www.danieldsjoberg.com/gtsummary/reference/trial.html" class="external-link">trial</a></span> <span class="op">|></span> <span class="fu">regression_model_uv</span><span class="op">(</span></span></span>
|
|
||||||
<span class="r-in"><span> outcome.str <span class="op">=</span> <span class="st">"trt"</span>,</span></span>
|
|
||||||
<span class="r-in"><span> fun <span class="op">=</span> <span class="st">"stats::glm"</span>,</span></span>
|
|
||||||
<span class="r-in"><span> args.list <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/list.html" class="external-link">list</a></span><span class="op">(</span>family <span class="op">=</span> <span class="fu">stats</span><span class="fu">::</span><span class="fu"><a href="https://rdrr.io/r/stats/family.html" class="external-link">binomial</a></span><span class="op">(</span>link <span class="op">=</span> <span class="st">"logit"</span><span class="op">)</span><span class="op">)</span></span></span>
|
|
||||||
<span class="r-in"><span><span class="op">)</span></span></span>
|
|
||||||
<span class="r-in"><span><span class="op">}</span> <span class="co"># }</span></span></span>
|
|
||||||
</code></pre></div>
|
|
||||||
</div>
|
|
||||||
</main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>
|
|
||||||
</nav></aside></div>
|
|
||||||
|
|
||||||
|
|
||||||
<footer><div class="pkgdown-footer-left">
|
|
||||||
<p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.1.1.</p>
|
|
||||||
</div>
|
|
||||||
|
|
||||||
<div class="pkgdown-footer-right">
|
|
||||||
<p>Developed by Andreas Gammelgaard Damsbo. Provided without <strong>any warranty</strong>.</p>
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|
||||||
</div>
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|
||||||
|
|
||||||
</footer></div>
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|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
</body></html>
|
|
||||||
|
|
||||||
|
|
|
||||||
8
reference/regression_model_uv_list.html
Normal file
8
reference/regression_model_uv_list.html
Normal file
|
|
@ -0,0 +1,8 @@
|
||||||
|
<html>
|
||||||
|
<head>
|
||||||
|
<meta http-equiv="refresh" content="0;URL=https://agdamsbo.github.io/freesearcheR/reference/regression_model.html" />
|
||||||
|
<meta name="robots" content="noindex">
|
||||||
|
<link rel="canonical" href="https://agdamsbo.github.io/freesearcheR/reference/regression_model.html">
|
||||||
|
</head>
|
||||||
|
</html>
|
||||||
|
|
||||||
|
|
@ -71,7 +71,7 @@
|
||||||
<div class="section level2">
|
<div class="section level2">
|
||||||
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
|
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
|
||||||
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="kw">if</span> <span class="op">(</span><span class="cn">FALSE</span><span class="op">)</span> <span class="op">{</span> <span class="co"># \dontrun{</span></span></span>
|
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="kw">if</span> <span class="op">(</span><span class="cn">FALSE</span><span class="op">)</span> <span class="op">{</span> <span class="co"># \dontrun{</span></span></span>
|
||||||
<span class="r-in"><span><span class="fu">gtsummary</span><span class="fu">::</span><span class="va"><a href="https://www.danieldsjoberg.com/gtsummary/reference/trial.html" class="external-link">trial</a></span> <span class="op">|></span></span></span>
|
<span class="r-in"><span><span class="va">tbl</span> <span class="op"><-</span> <span class="fu">gtsummary</span><span class="fu">::</span><span class="va"><a href="https://www.danieldsjoberg.com/gtsummary/reference/trial.html" class="external-link">trial</a></span> <span class="op">|></span></span></span>
|
||||||
<span class="r-in"><span> <span class="fu"><a href="regression_model.html">regression_model</a></span><span class="op">(</span></span></span>
|
<span class="r-in"><span> <span class="fu"><a href="regression_model.html">regression_model</a></span><span class="op">(</span></span></span>
|
||||||
<span class="r-in"><span> outcome.str <span class="op">=</span> <span class="st">"stage"</span>,</span></span>
|
<span class="r-in"><span> outcome.str <span class="op">=</span> <span class="st">"stage"</span>,</span></span>
|
||||||
<span class="r-in"><span> fun <span class="op">=</span> <span class="st">"MASS::polr"</span></span></span>
|
<span class="r-in"><span> fun <span class="op">=</span> <span class="st">"MASS::polr"</span></span></span>
|
||||||
|
|
@ -84,7 +84,7 @@
|
||||||
<span class="r-in"><span> formula.str <span class="op">=</span> <span class="st">"{outcome.str}~."</span>,</span></span>
|
<span class="r-in"><span> formula.str <span class="op">=</span> <span class="st">"{outcome.str}~."</span>,</span></span>
|
||||||
<span class="r-in"><span> args.list <span class="op">=</span> <span class="cn">NULL</span></span></span>
|
<span class="r-in"><span> args.list <span class="op">=</span> <span class="cn">NULL</span></span></span>
|
||||||
<span class="r-in"><span> <span class="op">)</span> <span class="op">|></span></span></span>
|
<span class="r-in"><span> <span class="op">)</span> <span class="op">|></span></span></span>
|
||||||
<span class="r-in"><span> <span class="fu">regression_table</span><span class="op">(</span><span class="op">)</span></span></span>
|
<span class="r-in"><span> <span class="fu">regression_table</span><span class="op">(</span><span class="op">)</span> <span class="op">|></span> <span class="fu"><a href="https://rdrr.io/r/graphics/plot.default.html" class="external-link">plot</a></span><span class="op">(</span><span class="op">)</span></span></span>
|
||||||
<span class="r-in"><span><span class="fu">gtsummary</span><span class="fu">::</span><span class="va"><a href="https://www.danieldsjoberg.com/gtsummary/reference/trial.html" class="external-link">trial</a></span> <span class="op">|></span></span></span>
|
<span class="r-in"><span><span class="fu">gtsummary</span><span class="fu">::</span><span class="va"><a href="https://www.danieldsjoberg.com/gtsummary/reference/trial.html" class="external-link">trial</a></span> <span class="op">|></span></span></span>
|
||||||
<span class="r-in"><span> <span class="fu"><a href="regression_model.html">regression_model</a></span><span class="op">(</span></span></span>
|
<span class="r-in"><span> <span class="fu"><a href="regression_model.html">regression_model</a></span><span class="op">(</span></span></span>
|
||||||
<span class="r-in"><span> outcome.str <span class="op">=</span> <span class="st">"trt"</span>,</span></span>
|
<span class="r-in"><span> outcome.str <span class="op">=</span> <span class="st">"trt"</span>,</span></span>
|
||||||
|
|
@ -93,14 +93,14 @@
|
||||||
<span class="r-in"><span> <span class="op">)</span> <span class="op">|></span></span></span>
|
<span class="r-in"><span> <span class="op">)</span> <span class="op">|></span></span></span>
|
||||||
<span class="r-in"><span> <span class="fu">regression_table</span><span class="op">(</span><span class="op">)</span></span></span>
|
<span class="r-in"><span> <span class="fu">regression_table</span><span class="op">(</span><span class="op">)</span></span></span>
|
||||||
<span class="r-in"><span><span class="fu">gtsummary</span><span class="fu">::</span><span class="va"><a href="https://www.danieldsjoberg.com/gtsummary/reference/trial.html" class="external-link">trial</a></span> <span class="op">|></span></span></span>
|
<span class="r-in"><span><span class="fu">gtsummary</span><span class="fu">::</span><span class="va"><a href="https://www.danieldsjoberg.com/gtsummary/reference/trial.html" class="external-link">trial</a></span> <span class="op">|></span></span></span>
|
||||||
<span class="r-in"><span> <span class="fu"><a href="regression_model_uv.html">regression_model_uv</a></span><span class="op">(</span></span></span>
|
<span class="r-in"><span> <span class="fu"><a href="regression_model.html">regression_model_uv</a></span><span class="op">(</span></span></span>
|
||||||
<span class="r-in"><span> outcome.str <span class="op">=</span> <span class="st">"trt"</span>,</span></span>
|
<span class="r-in"><span> outcome.str <span class="op">=</span> <span class="st">"trt"</span>,</span></span>
|
||||||
<span class="r-in"><span> fun <span class="op">=</span> <span class="st">"stats::glm"</span>,</span></span>
|
<span class="r-in"><span> fun <span class="op">=</span> <span class="st">"stats::glm"</span>,</span></span>
|
||||||
<span class="r-in"><span> args.list <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/list.html" class="external-link">list</a></span><span class="op">(</span>family <span class="op">=</span> <span class="fu">stats</span><span class="fu">::</span><span class="fu"><a href="https://rdrr.io/r/stats/family.html" class="external-link">binomial</a></span><span class="op">(</span>link <span class="op">=</span> <span class="st">"logit"</span><span class="op">)</span><span class="op">)</span></span></span>
|
<span class="r-in"><span> args.list <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/list.html" class="external-link">list</a></span><span class="op">(</span>family <span class="op">=</span> <span class="fu">stats</span><span class="fu">::</span><span class="fu"><a href="https://rdrr.io/r/stats/family.html" class="external-link">binomial</a></span><span class="op">(</span>link <span class="op">=</span> <span class="st">"logit"</span><span class="op">)</span><span class="op">)</span></span></span>
|
||||||
<span class="r-in"><span> <span class="op">)</span> <span class="op">|></span></span></span>
|
<span class="r-in"><span> <span class="op">)</span> <span class="op">|></span></span></span>
|
||||||
<span class="r-in"><span> <span class="fu">regression_table</span><span class="op">(</span><span class="op">)</span></span></span>
|
<span class="r-in"><span> <span class="fu">regression_table</span><span class="op">(</span><span class="op">)</span></span></span>
|
||||||
<span class="r-in"><span><span class="fu">gtsummary</span><span class="fu">::</span><span class="va"><a href="https://www.danieldsjoberg.com/gtsummary/reference/trial.html" class="external-link">trial</a></span> <span class="op">|></span></span></span>
|
<span class="r-in"><span><span class="fu">gtsummary</span><span class="fu">::</span><span class="va"><a href="https://www.danieldsjoberg.com/gtsummary/reference/trial.html" class="external-link">trial</a></span> <span class="op">|></span></span></span>
|
||||||
<span class="r-in"><span> <span class="fu"><a href="regression_model_uv.html">regression_model_uv</a></span><span class="op">(</span></span></span>
|
<span class="r-in"><span> <span class="fu"><a href="regression_model.html">regression_model_uv</a></span><span class="op">(</span></span></span>
|
||||||
<span class="r-in"><span> outcome.str <span class="op">=</span> <span class="st">"stage"</span>,</span></span>
|
<span class="r-in"><span> outcome.str <span class="op">=</span> <span class="st">"stage"</span>,</span></span>
|
||||||
<span class="r-in"><span> args.list <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/list.html" class="external-link">list</a></span><span class="op">(</span>family <span class="op">=</span> <span class="fu">stats</span><span class="fu">::</span><span class="fu"><a href="https://rdrr.io/r/stats/family.html" class="external-link">binomial</a></span><span class="op">(</span>link <span class="op">=</span> <span class="st">"logit"</span><span class="op">)</span><span class="op">)</span></span></span>
|
<span class="r-in"><span> args.list <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/list.html" class="external-link">list</a></span><span class="op">(</span>family <span class="op">=</span> <span class="fu">stats</span><span class="fu">::</span><span class="fu"><a href="https://rdrr.io/r/stats/family.html" class="external-link">binomial</a></span><span class="op">(</span>link <span class="op">=</span> <span class="st">"logit"</span><span class="op">)</span><span class="op">)</span></span></span>
|
||||||
<span class="r-in"><span> <span class="op">)</span> <span class="op">|></span></span></span>
|
<span class="r-in"><span> <span class="op">)</span> <span class="op">|></span></span></span>
|
||||||
|
|
|
||||||
98
reference/remove_empty_cols.html
Normal file
98
reference/remove_empty_cols.html
Normal file
|
|
@ -0,0 +1,98 @@
|
||||||
|
<!DOCTYPE html>
|
||||||
|
<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>Removes columns with completenes below cutoff — remove_empty_cols • freesearcheR</title><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Montserrat-0.4.9/font.css" rel="stylesheet"><link href="../deps/Public_Sans-0.4.9/font.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet"><meta property="og:title" content="Removes columns with completenes below cutoff — remove_empty_cols"><meta name="description" content="Removes columns with completenes below cutoff"><meta property="og:description" content="Removes columns with completenes below cutoff"></head><body>
|
||||||
|
<a href="#main" class="visually-hidden-focusable">Skip to contents</a>
|
||||||
|
|
||||||
|
|
||||||
|
<nav class="navbar navbar-expand-lg fixed-top bg-primary" data-bs-theme="dark" aria-label="Site navigation"><div class="container">
|
||||||
|
|
||||||
|
<a class="navbar-brand me-2" href="../index.html">freesearcheR</a>
|
||||||
|
|
||||||
|
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">25.2.1</small>
|
||||||
|
|
||||||
|
|
||||||
|
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||||
|
<span class="navbar-toggler-icon"></span>
|
||||||
|
</button>
|
||||||
|
|
||||||
|
<div id="navbar" class="collapse navbar-collapse ms-3">
|
||||||
|
<ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
|
||||||
|
<li class="nav-item"><a class="nav-link" href="../ROADMAP.html">Roadmap</a></li>
|
||||||
|
<li class="nav-item"><a class="nav-link" href="../news/index.html">Changelog</a></li>
|
||||||
|
</ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search">
|
||||||
|
<input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li>
|
||||||
|
<li class="nav-item"><a class="external-link nav-link" href="https://github.com/agdamsbo/freesearcheR/" aria-label="GitHub"><span class="fa fab fa-github fa-lg"></span></a></li>
|
||||||
|
</ul></div>
|
||||||
|
|
||||||
|
|
||||||
|
</div>
|
||||||
|
</nav><div class="container template-reference-topic">
|
||||||
|
<div class="row">
|
||||||
|
<main id="main" class="col-md-9"><div class="page-header">
|
||||||
|
|
||||||
|
<h1>Removes columns with completenes below cutoff</h1>
|
||||||
|
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/freesearcheR/blob/main/R/helpers.R" class="external-link"><code>R/helpers.R</code></a></small>
|
||||||
|
<div class="d-none name"><code>remove_empty_cols.Rd</code></div>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="ref-description section level2">
|
||||||
|
<p>Removes columns with completenes below cutoff</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
|
||||||
|
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">remove_empty_cols</span><span class="op">(</span><span class="va">data</span>, cutoff <span class="op">=</span> <span class="fl">0.7</span><span class="op">)</span></span></code></pre></div>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
|
||||||
|
|
||||||
|
|
||||||
|
<dl><dt id="arg-data">data<a class="anchor" aria-label="anchor" href="#arg-data"></a></dt>
|
||||||
|
<dd><p>data frame</p></dd>
|
||||||
|
|
||||||
|
|
||||||
|
<dt id="arg-cutoff">cutoff<a class="anchor" aria-label="anchor" href="#arg-cutoff"></a></dt>
|
||||||
|
<dd><p>numeric</p></dd>
|
||||||
|
|
||||||
|
</dl></div>
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
|
||||||
|
<p>data frame</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
|
||||||
|
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/data.frame.html" class="external-link">data.frame</a></span><span class="op">(</span>a<span class="op">=</span><span class="fl">1</span><span class="op">:</span><span class="fl">10</span>,b<span class="op">=</span><span class="cn">NA</span>, c<span class="op">=</span><span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">2</span>,<span class="cn">NA</span><span class="op">)</span><span class="op">)</span> <span class="op">|></span> <span class="fu">remove_empty_cols</span><span class="op">(</span>cutoff<span class="op">=</span><span class="fl">.5</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> a c</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> 1 1 2</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> 2 2 NA</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> 3 3 2</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> 4 4 NA</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> 5 5 2</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> 6 6 NA</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> 7 7 2</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> 8 8 NA</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> 9 9 2</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> 10 10 NA</span>
|
||||||
|
</code></pre></div>
|
||||||
|
</div>
|
||||||
|
</main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>
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|
||||||
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<p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.1.1.</p>
|
||||||
|
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|
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|
||||||
|
<div class="pkgdown-footer-right">
|
||||||
|
<p>Developed by Andreas Gammelgaard Damsbo. Provided without <strong>any warranty</strong>.</p>
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|
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|
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|
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|
||||||
|
|
||||||
|
|
||||||
|
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|
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|
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168
reference/supported_functions.html
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|
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|
||||||
|
<!DOCTYPE html>
|
||||||
|
<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><title>Implemented functions — supported_functions • freesearcheR</title><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Montserrat-0.4.9/font.css" rel="stylesheet"><link href="../deps/Public_Sans-0.4.9/font.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/all.min.css" rel="stylesheet"><link href="../deps/font-awesome-6.5.2/css/v4-shims.min.css" rel="stylesheet"><script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><link href="../extra.css" rel="stylesheet"><meta property="og:title" content="Implemented functions — supported_functions"><meta name="description" content='Library of supported functions. The list name and "descr" element should be
|
||||||
|
unique for each element on list.'><meta property="og:description" content='Library of supported functions. The list name and "descr" element should be
|
||||||
|
unique for each element on list.'></head><body>
|
||||||
|
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||||||
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|
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|
||||||
|
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">25.2.1</small>
|
||||||
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<li class="nav-item"><a class="external-link nav-link" href="https://github.com/agdamsbo/freesearcheR/" aria-label="GitHub"><span class="fa fab fa-github fa-lg"></span></a></li>
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|
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|
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|
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|
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|
||||||
|
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|
||||||
|
|
||||||
|
<h1>Implemented functions</h1>
|
||||||
|
<small class="dont-index">Source: <a href="https://github.com/agdamsbo/freesearcheR/blob/main/R/regression_model.R" class="external-link"><code>R/regression_model.R</code></a></small>
|
||||||
|
<div class="d-none name"><code>supported_functions.Rd</code></div>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="ref-description section level2">
|
||||||
|
<p>Library of supported functions. The list name and "descr" element should be
|
||||||
|
unique for each element on list.</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
|
||||||
|
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">supported_functions</span><span class="op">(</span><span class="op">)</span></span></code></pre></div>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="value">Value<a class="anchor" aria-label="anchor" href="#value"></a></h2>
|
||||||
|
<p>list</p>
|
||||||
|
</div>
|
||||||
|
|
||||||
|
<div class="section level2">
|
||||||
|
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
|
||||||
|
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="fu">supported_functions</span><span class="op">(</span><span class="op">)</span></span></span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $lm</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $lm$descr</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "Linear regression model"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $lm$design</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "cross-sectional"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $lm$out.type</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "continuous"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $lm$fun</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "stats::lm"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $lm$args.list</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> NULL</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $lm$formula.str</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "{outcome.str}~{paste(vars,collapse='+')}"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $lm$table.fun</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "gtsummary::tbl_regression"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $lm$table.args.list</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $lm$table.args.list$exponentiate</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] FALSE</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $glm</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $glm$descr</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "Logistic regression model"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $glm$design</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "cross-sectional"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $glm$out.type</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "dichotomous"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $glm$fun</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "stats::glm"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $glm$args.list</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $glm$args.list$family</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> Family: binomial </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> Link function: logit </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $glm$formula.str</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "{outcome.str}~{paste(vars,collapse='+')}"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $glm$table.fun</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "gtsummary::tbl_regression"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $glm$table.args.list</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> list()</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $polr</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $polr$descr</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "Ordinal logistic regression model"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $polr$design</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "cross-sectional"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $polr$out.type</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "ordinal"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $polr$fun</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "MASS::polr"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $polr$args.list</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $polr$args.list$Hess</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] TRUE</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $polr$args.list$method</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "logistic"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $polr$formula.str</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "{outcome.str}~{paste(vars,collapse='+')}"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $polr$table.fun</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> [1] "gtsummary::tbl_regression"</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> $polr$table.args.list</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> list()</span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
<span class="r-out co"><span class="r-pr">#></span> </span>
|
||||||
|
</code></pre></div>
|
||||||
|
</div>
|
||||||
|
</main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>
|
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|
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<p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.1.1.</p>
|
||||||
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</div>
|
||||||
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|
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|
<div class="pkgdown-footer-right">
|
||||||
|
<p>Developed by Andreas Gammelgaard Damsbo. Provided without <strong>any warranty</strong>.</p>
|
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|
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|
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|
</footer></div>
|
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|
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|
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|
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|
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|
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|
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<url><loc>https://agdamsbo.github.io/freesearcheR/reference/add_sparkline.html</loc></url>
|
||||||
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/argsstring2list.html</loc></url>
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/argsstring2list.html</loc></url>
|
||||||
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/baseline_table.html</loc></url>
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/baseline_table.html</loc></url>
|
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|
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|
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|
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|
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|
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<url><loc>https://agdamsbo.github.io/freesearcheR/reference/custom_theme.html</loc></url>
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/custom_theme.html</loc></url>
|
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<url><loc>https://agdamsbo.github.io/freesearcheR/reference/cut-variable.html</loc></url>
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/cut-variable.html</loc></url>
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<url><loc>https://agdamsbo.github.io/freesearcheR/reference/cut.html</loc></url>
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<url><loc>https://agdamsbo.github.io/freesearcheR/reference/cut.html</loc></url>
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<url><loc>https://agdamsbo.github.io/freesearcheR/reference/data-correlations.html</loc></url>
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<url><loc>https://agdamsbo.github.io/freesearcheR/reference/data-summary.html</loc></url>
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<url><loc>https://agdamsbo.github.io/freesearcheR/reference/data-summary.html</loc></url>
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<url><loc>https://agdamsbo.github.io/freesearcheR/reference/default_format_arguments.html</loc></url>
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<url><loc>https://agdamsbo.github.io/freesearcheR/reference/default_format_arguments.html</loc></url>
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<url><loc>https://agdamsbo.github.io/freesearcheR/reference/default_parsing.html</loc></url>
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<url><loc>https://agdamsbo.github.io/freesearcheR/reference/default_parsing.html</loc></url>
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<url><loc>https://agdamsbo.github.io/freesearcheR/reference/factorize.html</loc></url>
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<url><loc>https://agdamsbo.github.io/freesearcheR/reference/factorize.html</loc></url>
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<url><loc>https://agdamsbo.github.io/freesearcheR/reference/file_export.html</loc></url>
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<url><loc>https://agdamsbo.github.io/freesearcheR/reference/file_export.html</loc></url>
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<url><loc>https://agdamsbo.github.io/freesearcheR/reference/format_writer.html</loc></url>
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<url><loc>https://agdamsbo.github.io/freesearcheR/reference/format_writer.html</loc></url>
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<url><loc>https://agdamsbo.github.io/freesearcheR/reference/get_fun_options.html</loc></url>
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<url><loc>https://agdamsbo.github.io/freesearcheR/reference/getfun.html</loc></url>
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<url><loc>https://agdamsbo.github.io/freesearcheR/reference/getfun.html</loc></url>
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<url><loc>https://agdamsbo.github.io/freesearcheR/reference/gg_theme_export.html</loc></url>
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<url><loc>https://agdamsbo.github.io/freesearcheR/reference/gg_theme_shiny.html</loc></url>
|
||||||
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/index.html</loc></url>
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/index.html</loc></url>
|
||||||
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/index_embed.html</loc></url>
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<url><loc>https://agdamsbo.github.io/freesearcheR/reference/index_embed.html</loc></url>
|
||||||
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/is_any_class.html</loc></url>
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/is_any_class.html</loc></url>
|
||||||
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/is_consecutive.html</loc></url>
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/is_consecutive.html</loc></url>
|
||||||
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/is_datetime.html</loc></url>
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/is_datetime.html</loc></url>
|
||||||
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/launch.html</loc></url>
|
||||||
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/m_datafileUI.html</loc></url>
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/m_datafileUI.html</loc></url>
|
||||||
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/merge_long.html</loc></url>
|
||||||
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/modify_qmd.html</loc></url>
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/modify_qmd.html</loc></url>
|
||||||
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/outcome_type.html</loc></url>
|
||||||
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/overview_vars.html</loc></url>
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/overview_vars.html</loc></url>
|
||||||
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/plot.tbl_regression.html</loc></url>
|
||||||
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/possible_functions.html</loc></url>
|
||||||
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/read_input.html</loc></url>
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/read_input.html</loc></url>
|
||||||
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/redcap_read_shiny_module.html</loc></url>
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/redcap_read_shiny_module.html</loc></url>
|
||||||
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/regression_model.html</loc></url>
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/regression_model.html</loc></url>
|
||||||
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/regression_model_uv.html</loc></url>
|
|
||||||
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/regression_table.html</loc></url>
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/regression_table.html</loc></url>
|
||||||
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/remove_empty_cols.html</loc></url>
|
||||||
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/remove_na_attr.html</loc></url>
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/remove_na_attr.html</loc></url>
|
||||||
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/shiny_freesearcheR.html</loc></url>
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/shiny_freesearcheR.html</loc></url>
|
||||||
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/specify_qmd_format.html</loc></url>
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/specify_qmd_format.html</loc></url>
|
||||||
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/supported_functions.html</loc></url>
|
||||||
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/tbl_merge.html</loc></url>
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/tbl_merge.html</loc></url>
|
||||||
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/update-variables.html</loc></url>
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/update-variables.html</loc></url>
|
||||||
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/update_variables_datagrid.html</loc></url>
|
<url><loc>https://agdamsbo.github.io/freesearcheR/reference/update_variables_datagrid.html</loc></url>
|
||||||
|
|
|
||||||
Loading…
Add table
Reference in a new issue