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plots new accept pri, sec and ter arguments instead of x,y,z to avoid confusion. tests, tests, tests

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Andreas Gammelgaard Damsbo 2025-04-15 12:04:32 +02:00
commit 652a8ca1b7
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28 changed files with 3275 additions and 179 deletions
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8
R/correlations-module.R
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@ -46,7 +46,8 @@ data_correlations_server <- function(id,
} else {
out <- data()
}
out |> dplyr::mutate(dplyr::across(tidyselect::everything(),as.numeric))
# out |> dplyr::mutate(dplyr::across(tidyselect::everything(),as.numeric))
sapply(data,as.numeric)
# as.numeric()
})
@ -100,8 +101,9 @@ data_correlations_server <- function(id,
}
correlation_pairs <- function(data, threshold = .8) {
data <- data[!sapply(data, is.character)]
data <- data |> dplyr::mutate(dplyr::across(dplyr::where(is.factor), as.numeric))
data <- as.data.frame(data)[!sapply(as.data.frame(data), is.character)]
data <- sapply(data,\(.x)if (is.factor(.x)) as.numeric(.x) else .x) |> as.data.frame()
# data <- data |> dplyr::mutate(dplyr::across(dplyr::where(is.factor), as.numeric))
cor <- Hmisc::rcorr(as.matrix(data))
r <- cor$r %>% as.table()
d <- r |>