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Andreas Gammelgaard Damsbo 2025-04-29 15:09:12 +02:00
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SESSION.md
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-------------------------------------------------------------------------------- --------------------------------------------------------------------------------
-------------------------------- R environment --------------------------------- -------------------------------- R environment ---------------------------------
-------------------------------------------------------------------------------- --------------------------------------------------------------------------------
|setting |value | |setting |value |
|:-----------|:-------------------------------------| |:-----------|:------------------------------------------|
|version |R version 4.4.1 (2024-06-14) | |version |R version 4.4.1 (2024-06-14) |
|os |macOS 15.3.1 | |os |macOS 15.3.1 |
|system |aarch64, darwin20 | |system |aarch64, darwin20 |
|ui |RStudio | |ui |RStudio |
|language |(EN) | |language |(EN) |
|collate |en_US.UTF-8 | |collate |en_US.UTF-8 |
|ctype |en_US.UTF-8 | |ctype |en_US.UTF-8 |
|tz |Europe/Copenhagen | |tz |Europe/Copenhagen |
|date |2025-04-29 | |date |2025-04-29 |
|rstudio |2024.12.1+563 Kousa Dogwood (desktop) | |rstudio |2024.12.1+563 Kousa Dogwood (desktop) |
|pandoc |3.6.4 @ /opt/homebrew/bin/pandoc | |pandoc |3.6.4 @ /opt/homebrew/bin/ (via rmarkdown) |
|quarto |1.6.40 @ /usr/local/bin/quarto | |quarto |1.6.40 @ /usr/local/bin/quarto |
|FreesearchR |25.4.4.250429 | |FreesearchR |25.4.4.250429 |
-------------------------------------------------------------------------------- --------------------------------------------------------------------------------
----------------------------------- packages ----------------------------------- ----------------------------------- packages -----------------------------------
-------------------------------------------------------------------------------- --------------------------------------------------------------------------------
|package |loadedversion |date |source | |package |loadedversion |date |source |
|:-----------|:-------------|:----------|:--------------| |:-------------|:-------------|:----------|:--------------|
|bit |4.6.0 |2025-03-06 |CRAN (R 4.4.1) | |apexcharter |0.4.4 |2024-09-06 |CRAN (R 4.4.1) |
|bit64 |4.6.0-1 |2025-01-16 |CRAN (R 4.4.1) | |askpass |1.2.1 |2024-10-04 |CRAN (R 4.4.1) |
|cachem |1.1.0 |2024-05-16 |CRAN (R 4.4.1) | |assertthat |0.2.1 |2019-03-21 |CRAN (R 4.4.1) |
|cli |3.6.5 |2025-04-23 |CRAN (R 4.4.1) | |backports |1.5.0 |2024-05-23 |CRAN (R 4.4.1) |
|crayon |1.5.3 |2024-06-20 |CRAN (R 4.4.1) | |bayestestR |0.15.2 |2025-04-28 |CRAN (R 4.4.1) |
|desc |1.4.3 |2023-12-10 |CRAN (R 4.4.1) | |bit |4.6.0 |2025-03-06 |CRAN (R 4.4.1) |
|devtools |2.4.5 |2022-10-11 |CRAN (R 4.4.0) | |bit64 |4.6.0-1 |2025-01-16 |CRAN (R 4.4.1) |
|digest |0.6.37 |2024-08-19 |CRAN (R 4.4.1) | |boot |1.3-31 |2024-08-28 |CRAN (R 4.4.1) |
|ellipsis |0.3.2 |2021-04-29 |CRAN (R 4.4.1) | |broom |1.0.8 |2025-03-28 |CRAN (R 4.4.1) |
|fastmap |1.2.0 |2024-05-15 |CRAN (R 4.4.1) | |broom.helpers |1.20.0 |2025-04-24 |CRAN (R 4.4.1) |
|fs |1.6.6 |2025-04-12 |CRAN (R 4.4.1) | |bsicons |0.1.2 |2023-11-04 |CRAN (R 4.4.0) |
|glue |1.8.0 |2024-09-30 |CRAN (R 4.4.1) | |bslib |0.9.0 |2025-01-30 |CRAN (R 4.4.1) |
|here |1.0.1 |2020-12-13 |CRAN (R 4.4.1) | |cachem |1.1.0 |2024-05-16 |CRAN (R 4.4.1) |
|hms |1.1.3 |2023-03-21 |CRAN (R 4.4.0) | |callr |3.7.6 |2024-03-25 |CRAN (R 4.4.0) |
|htmltools |0.5.8.1 |2024-04-04 |CRAN (R 4.4.1) | |cellranger |1.1.0 |2016-07-27 |CRAN (R 4.4.0) |
|htmlwidgets |1.6.4 |2023-12-06 |CRAN (R 4.4.0) | |cffr |1.2.0 |2025-01-25 |CRAN (R 4.4.1) |
|httpuv |1.6.16 |2025-04-16 |CRAN (R 4.4.1) | |class |7.3-23 |2025-01-01 |CRAN (R 4.4.1) |
|later |1.4.2 |2025-04-08 |CRAN (R 4.4.1) | |classInt |0.4-11 |2025-01-08 |CRAN (R 4.4.1) |
|lifecycle |1.0.4 |2023-11-07 |CRAN (R 4.4.1) | |cli |3.6.5 |2025-04-23 |CRAN (R 4.4.1) |
|magrittr |2.0.3 |2022-03-30 |CRAN (R 4.4.1) | |commonmark |1.9.5 |2025-03-17 |CRAN (R 4.4.1) |
|memoise |2.0.1 |2021-11-26 |CRAN (R 4.4.0) | |correlation |0.8.7 |2025-03-03 |CRAN (R 4.4.1) |
|mime |0.13 |2025-03-17 |CRAN (R 4.4.1) | |crayon |1.5.3 |2024-06-20 |CRAN (R 4.4.1) |
|miniUI |0.1.2 |2025-04-17 |CRAN (R 4.4.1) | |crosstalk |1.2.1 |2023-11-23 |CRAN (R 4.4.0) |
|pillar |1.10.2 |2025-04-05 |CRAN (R 4.4.1) | |curl |6.2.2 |2025-03-24 |CRAN (R 4.4.1) |
|pkgbuild |1.4.7 |2025-03-24 |CRAN (R 4.4.1) | |data.table |1.17.0 |2025-02-22 |CRAN (R 4.4.1) |
|pkgconfig |2.0.3 |2019-09-22 |CRAN (R 4.4.1) | |datamods |1.5.3 |2024-10-02 |CRAN (R 4.4.1) |
|pkgload |1.4.0 |2024-06-28 |CRAN (R 4.4.0) | |datawizard |1.0.2 |2025-03-24 |CRAN (R 4.4.1) |
|profvis |0.4.0 |2024-09-20 |CRAN (R 4.4.1) | |desc |1.4.3 |2023-12-10 |CRAN (R 4.4.1) |
|promises |1.3.2 |2024-11-28 |CRAN (R 4.4.1) | |devtools |2.4.5 |2022-10-11 |CRAN (R 4.4.0) |
|purrr |1.0.4 |2025-02-05 |CRAN (R 4.4.1) | |DHARMa |0.4.7 |2024-10-18 |CRAN (R 4.4.1) |
|R6 |2.6.1 |2025-02-15 |CRAN (R 4.4.1) | |digest |0.6.37 |2024-08-19 |CRAN (R 4.4.1) |
|Rcpp |1.0.14 |2025-01-12 |CRAN (R 4.4.1) | |dplyr |1.1.4 |2023-11-17 |CRAN (R 4.4.0) |
|readr |2.1.5 |2024-01-10 |CRAN (R 4.4.0) | |DT |0.33 |2024-04-04 |CRAN (R 4.4.0) |
|remotes |2.5.0 |2024-03-17 |CRAN (R 4.4.1) | |e1071 |1.7-16 |2024-09-16 |CRAN (R 4.4.1) |
|renv |1.1.4 |2025-03-20 |CRAN (R 4.4.1) | |easystats |0.7.4 |2025-02-06 |CRAN (R 4.4.1) |
|rlang |1.1.6 |2025-04-11 |CRAN (R 4.4.1) | |effectsize |1.0.0 |2024-12-10 |CRAN (R 4.4.1) |
|rprojroot |2.0.4 |2023-11-05 |CRAN (R 4.4.1) | |ellipsis |0.3.2 |2021-04-29 |CRAN (R 4.4.1) |
|rsconnect |1.3.4 |2025-01-22 |CRAN (R 4.4.1) | |evaluate |1.0.3 |2025-01-10 |CRAN (R 4.4.1) |
|rstudioapi |0.17.1 |2024-10-22 |CRAN (R 4.4.1) | |farver |2.1.2 |2024-05-13 |CRAN (R 4.4.1) |
|sessioninfo |1.2.3 |2025-02-05 |CRAN (R 4.4.1) | |fastmap |1.2.0 |2024-05-15 |CRAN (R 4.4.1) |
|shiny |1.10.0 |2024-12-14 |CRAN (R 4.4.1) | |fontawesome |0.5.3 |2024-11-16 |CRAN (R 4.4.1) |
|tibble |3.2.1 |2023-03-20 |CRAN (R 4.4.0) | |forcats |1.0.0 |2023-01-29 |CRAN (R 4.4.0) |
|tidyselect |1.2.1 |2024-03-11 |CRAN (R 4.4.0) | |FreesearchR |25.4.4 |NA |NA |
|tzdb |0.5.0 |2025-03-15 |CRAN (R 4.4.1) | |fs |1.6.6 |2025-04-12 |CRAN (R 4.4.1) |
|urlchecker |1.0.1 |2021-11-30 |CRAN (R 4.4.1) | |generics |0.1.3 |2022-07-05 |CRAN (R 4.4.1) |
|usethis |3.1.0 |2024-11-26 |CRAN (R 4.4.1) | |ggplot2 |3.5.2 |2025-04-09 |CRAN (R 4.4.1) |
|vctrs |0.6.5 |2023-12-01 |CRAN (R 4.4.0) | |glue |1.8.0 |2024-09-30 |CRAN (R 4.4.1) |
|vroom |1.6.5 |2023-12-05 |CRAN (R 4.4.0) | |gt |1.0.0 |2025-04-05 |CRAN (R 4.4.1) |
|withr |3.0.2 |2024-10-28 |CRAN (R 4.4.1) | |gtable |0.3.6 |2024-10-25 |CRAN (R 4.4.1) |
|xtable |1.8-4 |2019-04-21 |CRAN (R 4.4.1) | |gtsummary |2.2.0 |2025-04-14 |CRAN (R 4.4.1) |
|haven |2.5.4 |2023-11-30 |CRAN (R 4.4.0) |
|here |1.0.1 |2020-12-13 |CRAN (R 4.4.1) |
|hms |1.1.3 |2023-03-21 |CRAN (R 4.4.0) |
|htmltools |0.5.8.1 |2024-04-04 |CRAN (R 4.4.1) |
|htmlwidgets |1.6.4 |2023-12-06 |CRAN (R 4.4.0) |
|httpuv |1.6.16 |2025-04-16 |CRAN (R 4.4.1) |
|IDEAFilter |0.2.0 |2024-04-15 |CRAN (R 4.4.0) |
|insight |1.2.0 |2025-04-22 |CRAN (R 4.4.1) |
|jquerylib |0.1.4 |2021-04-26 |CRAN (R 4.4.0) |
|jsonlite |2.0.0 |2025-03-27 |CRAN (R 4.4.1) |
|jsonvalidate |1.5.0 |2025-02-07 |CRAN (R 4.4.1) |
|KernSmooth |2.23-26 |2025-01-01 |CRAN (R 4.4.1) |
|keyring |1.3.2 |2023-12-11 |CRAN (R 4.4.0) |
|knitr |1.50 |2025-03-16 |CRAN (R 4.4.1) |
|later |1.4.2 |2025-04-08 |CRAN (R 4.4.1) |
|lattice |0.22-7 |2025-04-02 |CRAN (R 4.4.1) |
|lifecycle |1.0.4 |2023-11-07 |CRAN (R 4.4.1) |
|lme4 |1.1-37 |2025-03-26 |CRAN (R 4.4.1) |
|magrittr |2.0.3 |2022-03-30 |CRAN (R 4.4.1) |
|MASS |7.3-65 |2025-02-28 |CRAN (R 4.4.1) |
|Matrix |1.7-3 |2025-03-11 |CRAN (R 4.4.1) |
|memoise |2.0.1 |2021-11-26 |CRAN (R 4.4.0) |
|mime |0.13 |2025-03-17 |CRAN (R 4.4.1) |
|miniUI |0.1.2 |2025-04-17 |CRAN (R 4.4.1) |
|minqa |1.2.8 |2024-08-17 |CRAN (R 4.4.1) |
|modelbased |0.10.0 |2025-03-10 |CRAN (R 4.4.1) |
|nlme |3.1-168 |2025-03-31 |CRAN (R 4.4.1) |
|nloptr |2.2.1 |2025-03-17 |CRAN (R 4.4.1) |
|openssl |2.3.2 |2025-02-03 |CRAN (R 4.4.1) |
|parameters |0.24.2 |2025-03-04 |CRAN (R 4.4.1) |
|patchwork |1.3.0 |2024-09-16 |CRAN (R 4.4.1) |
|performance |0.13.0 |2025-01-15 |CRAN (R 4.4.1) |
|phosphoricons |0.2.1 |2024-04-08 |CRAN (R 4.4.0) |
|pillar |1.10.2 |2025-04-05 |CRAN (R 4.4.1) |
|pkgbuild |1.4.7 |2025-03-24 |CRAN (R 4.4.1) |
|pkgconfig |2.0.3 |2019-09-22 |CRAN (R 4.4.1) |
|pkgdown |2.1.1 |2025-04-28 |CRAN (R 4.4.1) |
|pkgload |1.4.0 |2024-06-28 |CRAN (R 4.4.0) |
|processx |3.8.6 |2025-02-21 |CRAN (R 4.4.1) |
|profvis |0.4.0 |2024-09-20 |CRAN (R 4.4.1) |
|promises |1.3.2 |2024-11-28 |CRAN (R 4.4.1) |
|proxy |0.4-27 |2022-06-09 |CRAN (R 4.4.1) |
|ps |1.9.1 |2025-04-12 |CRAN (R 4.4.1) |
|purrr |1.0.4 |2025-02-05 |CRAN (R 4.4.1) |
|quarto |1.4.4 |2024-07-20 |CRAN (R 4.4.0) |
|R6 |2.6.1 |2025-02-15 |CRAN (R 4.4.1) |
|rbibutils |2.3 |2024-10-04 |CRAN (R 4.4.1) |
|RColorBrewer |1.1-3 |2022-04-03 |CRAN (R 4.4.1) |
|Rcpp |1.0.14 |2025-01-12 |CRAN (R 4.4.1) |
|Rdpack |2.6.4 |2025-04-09 |CRAN (R 4.4.1) |
|reactable |0.4.4 |2023-03-12 |CRAN (R 4.4.0) |
|readODS |2.3.2 |2025-01-13 |CRAN (R 4.4.1) |
|readr |2.1.5 |2024-01-10 |CRAN (R 4.4.0) |
|readxl |1.4.5 |2025-03-07 |CRAN (R 4.4.1) |
|reformulas |0.4.0 |2024-11-03 |CRAN (R 4.4.1) |
|remotes |2.5.0 |2024-03-17 |CRAN (R 4.4.1) |
|renv |1.1.4 |2025-03-20 |CRAN (R 4.4.1) |
|report |0.6.1 |2025-02-07 |CRAN (R 4.4.1) |
|rio |1.2.3 |2024-09-25 |CRAN (R 4.4.1) |
|rlang |1.1.6 |2025-04-11 |CRAN (R 4.4.1) |
|rmarkdown |2.29 |2024-11-04 |CRAN (R 4.4.1) |
|rprojroot |2.0.4 |2023-11-05 |CRAN (R 4.4.1) |
|rsconnect |1.3.4 |2025-01-22 |CRAN (R 4.4.1) |
|rstudioapi |0.17.1 |2024-10-22 |CRAN (R 4.4.1) |
|sass |0.4.10 |2025-04-11 |CRAN (R 4.4.1) |
|scales |1.4.0 |2025-04-24 |CRAN (R 4.4.1) |
|see |0.11.0 |2025-03-11 |CRAN (R 4.4.1) |
|sessioninfo |1.2.3 |2025-02-05 |CRAN (R 4.4.1) |
|shiny |1.10.0 |2024-12-14 |CRAN (R 4.4.1) |
|shinybusy |0.3.3 |2024-03-09 |CRAN (R 4.4.0) |
|shinyTime |1.0.3 |2022-08-19 |CRAN (R 4.4.0) |
|shinyWidgets |0.9.0 |2025-02-21 |CRAN (R 4.4.1) |
|tibble |3.2.1 |2023-03-20 |CRAN (R 4.4.0) |
|tidyr |1.3.1 |2024-01-24 |CRAN (R 4.4.1) |
|tidyselect |1.2.1 |2024-03-11 |CRAN (R 4.4.0) |
|toastui |0.4.0 |2025-04-03 |CRAN (R 4.4.1) |
|tzdb |0.5.0 |2025-03-15 |CRAN (R 4.4.1) |
|urlchecker |1.0.1 |2021-11-30 |CRAN (R 4.4.1) |
|usethis |3.1.0 |2024-11-26 |CRAN (R 4.4.1) |
|V8 |6.0.3 |2025-03-26 |CRAN (R 4.4.1) |
|vctrs |0.6.5 |2023-12-01 |CRAN (R 4.4.0) |
|vroom |1.6.5 |2023-12-05 |CRAN (R 4.4.0) |
|withr |3.0.2 |2024-10-28 |CRAN (R 4.4.1) |
|writexl |1.5.4 |2025-04-15 |CRAN (R 4.4.1) |
|xfun |0.52 |2025-04-02 |CRAN (R 4.4.1) |
|xml2 |1.3.8 |2025-03-14 |CRAN (R 4.4.1) |
|xtable |1.8-4 |2019-04-21 |CRAN (R 4.4.1) |
|yaml |2.3.10 |2024-07-26 |CRAN (R 4.4.1) |

7
inst/apps/FreesearchR/app.R
View file

@ -9202,14 +9202,15 @@ ui_elements <- list(
shiny::br(), shiny::br(),
shinyWidgets::radioGroupButtons( shinyWidgets::radioGroupButtons(
inputId = "source", inputId = "source",
selected = "env", selected = "file",
choices = c( choices = c(
"File upload" = "file", "File upload" = "file",
"REDCap server export" = "redcap", "REDCap server export" = "redcap",
"Local or sample data" = "env" "Local or sample data" = "env"
), ),
width = "100%" size = "lg"
), ),
shiny::tags$script('document.querySelector("#source div").style.width = "100%"'),
shiny::helpText("Upload a file from your device, get data directly from REDCap or select a sample data set for testing from the app."), shiny::helpText("Upload a file from your device, get data directly from REDCap or select a sample data set for testing from the app."),
shiny::br(), shiny::br(),
shiny::br(), shiny::br(),
@ -9703,7 +9704,7 @@ ui <- bslib::page_fixed(
), ),
shiny::p( shiny::p(
style = "margin: 1; color: #888;", style = "margin: 1; color: #888;",
shiny::tags$a("AG Damsbo", href = "https://andreas.gdamsbo.dk/", target = "_blank", rel = "noopener noreferrer")," | ", app_version(), " | ", shiny::tags$a("License: AGPLv3", href = "https://github.com/agdamsbo/FreesearchR/blob/main/LICENSE.md", target = "_blank", rel = "noopener noreferrer"), " | ", shiny::tags$a("Source", href = "https://github.com/agdamsbo/FreesearchR/", target = "_blank", rel = "noopener noreferrer") shiny::tags$a("Docs", href = "https://agdamsbo.github.io/FreesearchR/", target = "_blank", rel = "noopener noreferrer")," | ", app_version(), " | ", shiny::tags$a("License: AGPLv3", href = "https://github.com/agdamsbo/FreesearchR/blob/main/LICENSE.md", target = "_blank", rel = "noopener noreferrer"), " | ", shiny::tags$a("Source", href = "https://github.com/agdamsbo/FreesearchR/", target = "_blank", rel = "noopener noreferrer"), " | ", shiny::tags$a("Share feedback", href = "https://redcap.au.dk/surveys/?s=JPCLPTXYDKFA8DA8", target = "_blank", rel = "noopener noreferrer")
), ),
) )
) )

2
inst/apps/FreesearchR/rsconnect/shinyapps.io/agdamsbo/FreesearchR.dcf
View file

@ -5,6 +5,6 @@ account: agdamsbo
server: shinyapps.io server: shinyapps.io
hostUrl: https://api.shinyapps.io/v1 hostUrl: https://api.shinyapps.io/v1
appId: 14600805 appId: 14600805
bundleId: 10198630 bundleId: 10199738
url: https://agdamsbo.shinyapps.io/FreesearchR/ url: https://agdamsbo.shinyapps.io/FreesearchR/
version: 1 version: 1

7
inst/apps/FreesearchR/ui.R
View file

@ -35,14 +35,15 @@ ui_elements <- list(
shiny::br(), shiny::br(),
shinyWidgets::radioGroupButtons( shinyWidgets::radioGroupButtons(
inputId = "source", inputId = "source",
selected = "env", selected = "file",
choices = c( choices = c(
"File upload" = "file", "File upload" = "file",
"REDCap server export" = "redcap", "REDCap server export" = "redcap",
"Local or sample data" = "env" "Local or sample data" = "env"
), ),
width = "100%" size = "lg"
), ),
shiny::tags$script('document.querySelector("#source div").style.width = "100%"'),
shiny::helpText("Upload a file from your device, get data directly from REDCap or select a sample data set for testing from the app."), shiny::helpText("Upload a file from your device, get data directly from REDCap or select a sample data set for testing from the app."),
shiny::br(), shiny::br(),
shiny::br(), shiny::br(),
@ -536,7 +537,7 @@ ui <- bslib::page_fixed(
), ),
shiny::p( shiny::p(
style = "margin: 1; color: #888;", style = "margin: 1; color: #888;",
shiny::tags$a("AG Damsbo", href = "https://andreas.gdamsbo.dk/", target = "_blank", rel = "noopener noreferrer")," | ", app_version(), " | ", shiny::tags$a("License: AGPLv3", href = "https://github.com/agdamsbo/FreesearchR/blob/main/LICENSE.md", target = "_blank", rel = "noopener noreferrer"), " | ", shiny::tags$a("Source", href = "https://github.com/agdamsbo/FreesearchR/", target = "_blank", rel = "noopener noreferrer") shiny::tags$a("Docs", href = "https://agdamsbo.github.io/FreesearchR/", target = "_blank", rel = "noopener noreferrer")," | ", app_version(), " | ", shiny::tags$a("License: AGPLv3", href = "https://github.com/agdamsbo/FreesearchR/blob/main/LICENSE.md", target = "_blank", rel = "noopener noreferrer"), " | ", shiny::tags$a("Source", href = "https://github.com/agdamsbo/FreesearchR/", target = "_blank", rel = "noopener noreferrer"), " | ", shiny::tags$a("Share feedback", href = "https://redcap.au.dk/surveys/?s=JPCLPTXYDKFA8DA8", target = "_blank", rel = "noopener noreferrer")
), ),
) )
) )

1
inst/apps/FreesearchR/www/style.css
View file

@ -11,6 +11,7 @@
.container-fluid > .nav > li > .container-fluid > .nav > li >
a[data-value='FreesearchR'] {font-size: 28px} a[data-value='FreesearchR'] {font-size: 28px}
/* from datamods */ /* from datamods */
.show-block { .show-block {
display: block !important; display: block !important;

1
inst/assets/css/FreesearchR.css
View file

@ -11,6 +11,7 @@
.container-fluid > .nav > li > .container-fluid > .nav > li >
a[data-value='FreesearchR'] {font-size: 28px} a[data-value='FreesearchR'] {font-size: 28px}
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renv.lock
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@ -653,11 +653,11 @@
}, },
"RcppArmadillo": { "RcppArmadillo": {
"Package": "RcppArmadillo", "Package": "RcppArmadillo",
"Version": "14.4.1-1", "Version": "14.4.2-1",
"Source": "Repository", "Source": "Repository",
"Type": "Package", "Type": "Package",
"Title": "'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra Library", "Title": "'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra Library",
"Date": "2025-03-27", "Date": "2025-04-25",
"Authors@R": "c(person(\"Dirk\", \"Eddelbuettel\", role = c(\"aut\", \"cre\"), email = \"edd@debian.org\", comment = c(ORCID = \"0000-0001-6419-907X\")), person(\"Romain\", \"Francois\", role = \"aut\", comment = c(ORCID = \"0000-0002-2444-4226\")), person(\"Doug\", \"Bates\", role = \"aut\", comment = c(ORCID = \"0000-0001-8316-9503\")), person(\"Binxiang\", \"Ni\", role = \"aut\"), person(\"Conrad\", \"Sanderson\", role = \"aut\", comment = c(ORCID = \"0000-0002-0049-4501\")))", "Authors@R": "c(person(\"Dirk\", \"Eddelbuettel\", role = c(\"aut\", \"cre\"), email = \"edd@debian.org\", comment = c(ORCID = \"0000-0001-6419-907X\")), person(\"Romain\", \"Francois\", role = \"aut\", comment = c(ORCID = \"0000-0002-2444-4226\")), person(\"Doug\", \"Bates\", role = \"aut\", comment = c(ORCID = \"0000-0001-8316-9503\")), person(\"Binxiang\", \"Ni\", role = \"aut\"), person(\"Conrad\", \"Sanderson\", role = \"aut\", comment = c(ORCID = \"0000-0002-0049-4501\")))",
"Description": "'Armadillo' is a templated C++ linear algebra library (by Conrad Sanderson) that aims towards a good balance between speed and ease of use. Integer, floating point and complex numbers are supported, as well as a subset of trigonometric and statistics functions. Various matrix decompositions are provided through optional integration with LAPACK and ATLAS libraries. The 'RcppArmadillo' package includes the header files from the templated 'Armadillo' library. Thus users do not need to install 'Armadillo' itself in order to use 'RcppArmadillo'. From release 7.800.0 on, 'Armadillo' is licensed under Apache License 2; previous releases were under licensed as MPL 2.0 from version 3.800.0 onwards and LGPL-3 prior to that; 'RcppArmadillo' (the 'Rcpp' bindings/bridge to Armadillo) is licensed under the GNU GPL version 2 or later, as is the rest of 'Rcpp'.", "Description": "'Armadillo' is a templated C++ linear algebra library (by Conrad Sanderson) that aims towards a good balance between speed and ease of use. Integer, floating point and complex numbers are supported, as well as a subset of trigonometric and statistics functions. Various matrix decompositions are provided through optional integration with LAPACK and ATLAS libraries. The 'RcppArmadillo' package includes the header files from the templated 'Armadillo' library. Thus users do not need to install 'Armadillo' itself in order to use 'RcppArmadillo'. From release 7.800.0 on, 'Armadillo' is licensed under Apache License 2; previous releases were under licensed as MPL 2.0 from version 3.800.0 onwards and LGPL-3 prior to that; 'RcppArmadillo' (the 'Rcpp' bindings/bridge to Armadillo) is licensed under the GNU GPL version 2 or later, as is the rest of 'Rcpp'.",
"License": "GPL (>= 2)", "License": "GPL (>= 2)",
@ -967,19 +967,19 @@
}, },
"bayestestR": { "bayestestR": {
"Package": "bayestestR", "Package": "bayestestR",
"Version": "0.15.2", "Version": "0.15.3",
"Source": "Repository", "Source": "Repository",
"Type": "Package", "Type": "Package",
"Title": "Understand and Describe Bayesian Models and Posterior Distributions", "Title": "Understand and Describe Bayesian Models and Posterior Distributions",
"Authors@R": "c(person(given = \"Dominique\", family = \"Makowski\", role = c(\"aut\", \"cre\"), email = \"dom.makowski@gmail.com\", comment = c(ORCID = \"0000-0001-5375-9967\")), person(given = \"Daniel\", family = \"Lüdecke\", role = \"aut\", email = \"d.luedecke@uke.de\", comment = c(ORCID = \"0000-0002-8895-3206\")), person(given = \"Mattan S.\", family = \"Ben-Shachar\", role = \"aut\", email = \"matanshm@post.bgu.ac.il\", comment = c(ORCID = \"0000-0002-4287-4801\")), person(given = \"Indrajeet\", family = \"Patil\", role = \"aut\", email = \"patilindrajeet.science@gmail.com\", comment = c(ORCID = \"0000-0003-1995-6531\")), person(given = \"Micah K.\", family = \"Wilson\", role = \"aut\", email = \"micah.k.wilson@curtin.edu.au\", comment = c(ORCID = \"0000-0003-4143-7308\")), person(given = \"Brenton M.\", family = \"Wiernik\", role = \"aut\", email = \"brenton@wiernik.org\", comment = c(ORCID = \"0000-0001-9560-6336\")), person(given = \"Paul-Christian\", family = \"Bürkner\", role = \"rev\", email = \"paul.buerkner@gmail.com\"), person(given = \"Tristan\", family = \"Mahr\", role = \"rev\", email = \"tristan.mahr@wisc.edu\", comment = c(ORCID = \"0000-0002-8890-5116\")), person(given = \"Henrik\", family = \"Singmann\", role = \"ctb\", email = \"singmann@gmail.com\", comment = c(ORCID = \"0000-0002-4842-3657\")), person(given = \"Quentin F.\", family = \"Gronau\", role = \"ctb\", comment = c(ORCID = \"0000-0001-5510-6943\")), person(given = \"Sam\", family = \"Crawley\", role = \"ctb\", email = \"sam@crawley.nz\", comment = c(ORCID = \"0000-0002-7847-0411\")))", "Authors@R": "c(person(given = \"Dominique\", family = \"Makowski\", role = c(\"aut\", \"cre\"), email = \"officialeasystats@gmail.com\", comment = c(ORCID = \"0000-0001-5375-9967\")), person(given = \"Daniel\", family = \"Lüdecke\", role = \"aut\", email = \"d.luedecke@uke.de\", comment = c(ORCID = \"0000-0002-8895-3206\")), person(given = \"Mattan S.\", family = \"Ben-Shachar\", role = \"aut\", email = \"matanshm@post.bgu.ac.il\", comment = c(ORCID = \"0000-0002-4287-4801\")), person(given = \"Indrajeet\", family = \"Patil\", role = \"aut\", email = \"patilindrajeet.science@gmail.com\", comment = c(ORCID = \"0000-0003-1995-6531\")), person(given = \"Micah K.\", family = \"Wilson\", role = \"aut\", email = \"micah.k.wilson@curtin.edu.au\", comment = c(ORCID = \"0000-0003-4143-7308\")), person(given = \"Brenton M.\", family = \"Wiernik\", role = \"aut\", email = \"brenton@wiernik.org\", comment = c(ORCID = \"0000-0001-9560-6336\")), person(given = \"Paul-Christian\", family = \"Bürkner\", role = \"rev\", email = \"paul.buerkner@gmail.com\"), person(given = \"Tristan\", family = \"Mahr\", role = \"rev\", email = \"tristan.mahr@wisc.edu\", comment = c(ORCID = \"0000-0002-8890-5116\")), person(given = \"Henrik\", family = \"Singmann\", role = \"ctb\", email = \"singmann@gmail.com\", comment = c(ORCID = \"0000-0002-4842-3657\")), person(given = \"Quentin F.\", family = \"Gronau\", role = \"ctb\", comment = c(ORCID = \"0000-0001-5510-6943\")), person(given = \"Sam\", family = \"Crawley\", role = \"ctb\", email = \"sam@crawley.nz\", comment = c(ORCID = \"0000-0002-7847-0411\")))",
"Maintainer": "Dominique Makowski <dom.makowski@gmail.com>", "Maintainer": "Dominique Makowski <officialeasystats@gmail.com>",
"Description": "Provides utilities to describe posterior distributions and Bayesian models. It includes point-estimates such as Maximum A Posteriori (MAP), measures of dispersion (Highest Density Interval - HDI; Kruschke, 2015 <doi:10.1016/C2012-0-00477-2>) and indices used for null-hypothesis testing (such as ROPE percentage, pd and Bayes factors). References: Makowski et al. (2021) <doi:10.21105/joss.01541>.", "Description": "Provides utilities to describe posterior distributions and Bayesian models. It includes point-estimates such as Maximum A Posteriori (MAP), measures of dispersion (Highest Density Interval - HDI; Kruschke, 2015 <doi:10.1016/C2012-0-00477-2>) and indices used for null-hypothesis testing (such as ROPE percentage, pd and Bayes factors). References: Makowski et al. (2021) <doi:10.21105/joss.01541>.",
"Depends": [ "Depends": [
"R (>= 3.6)" "R (>= 3.6)"
], ],
"Imports": [ "Imports": [
"insight (>= 1.0.1)", "insight (>= 1.1.0)",
"datawizard (>= 1.0.0)", "datawizard (>= 1.0.2)",
"graphics", "graphics",
"methods", "methods",
"stats", "stats",
@ -1008,7 +1008,7 @@
"lavaan", "lavaan",
"lme4", "lme4",
"logspline (>= 2.1.21)", "logspline (>= 2.1.21)",
"marginaleffects (>= 0.24.0)", "marginaleffects (>= 0.25.0)",
"MASS", "MASS",
"mclust", "mclust",
"mediation", "mediation",
@ -1017,8 +1017,8 @@
"parameters", "parameters",
"patchwork", "patchwork",
"performance", "performance",
"quadprog",
"posterior", "posterior",
"quadprog",
"RcppEigen", "RcppEigen",
"rmarkdown", "rmarkdown",
"rstan", "rstan",
@ -1330,7 +1330,7 @@
}, },
"broom.helpers": { "broom.helpers": {
"Package": "broom.helpers", "Package": "broom.helpers",
"Version": "1.20.0", "Version": "1.21.0",
"Source": "Repository", "Source": "Repository",
"Title": "Helpers for Model Coefficients Tibbles", "Title": "Helpers for Model Coefficients Tibbles",
"Authors@R": "c( person(\"Joseph\", \"Larmarange\", , \"joseph@larmarange.net\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0001-7097-700X\")), person(\"Daniel D.\", \"Sjoberg\", , \"danield.sjoberg@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0003-0862-2018\")) )", "Authors@R": "c( person(\"Joseph\", \"Larmarange\", , \"joseph@larmarange.net\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0001-7097-700X\")), person(\"Daniel D.\", \"Sjoberg\", , \"danield.sjoberg@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0003-0862-2018\")) )",
@ -1406,7 +1406,8 @@
"survival", "survival",
"testthat (>= 3.0.0)", "testthat (>= 3.0.0)",
"tidycmprsk", "tidycmprsk",
"VGAM" "VGAM",
"svyVGAM"
], ],
"VignetteBuilder": "knitr", "VignetteBuilder": "knitr",
"RdMacros": "lifecycle", "RdMacros": "lifecycle",
@ -5605,7 +5606,7 @@
}, },
"openxlsx2": { "openxlsx2": {
"Package": "openxlsx2", "Package": "openxlsx2",
"Version": "1.14", "Version": "1.15",
"Source": "Repository", "Source": "Repository",
"Type": "Package", "Type": "Package",
"Title": "Read, Write and Edit 'xlsx' Files", "Title": "Read, Write and Edit 'xlsx' Files",