diff --git a/404.html b/404.html index 2d5e3ab..eeb156b 100644 --- a/404.html +++ b/404.html @@ -38,6 +38,8 @@ diff --git a/CODE_OF_CONDUCT.html b/CODE_OF_CONDUCT.html index d3e1333..18a0b59 100644 --- a/CODE_OF_CONDUCT.html +++ b/CODE_OF_CONDUCT.html @@ -20,6 +20,8 @@ diff --git a/LICENSE.html b/LICENSE.html index b07e687..5c7cd04 100644 --- a/LICENSE.html +++ b/LICENSE.html @@ -20,6 +20,8 @@ diff --git a/QA.html b/QA.html index 940c1f6..eb6977c 100644 --- a/QA.html +++ b/QA.html @@ -20,6 +20,8 @@ diff --git a/ROADMAP.html b/ROADMAP.html index fe7f480..c890d47 100644 --- a/ROADMAP.html +++ b/ROADMAP.html @@ -20,6 +20,8 @@ diff --git a/SESSION.html b/SESSION.html new file mode 100644 index 0000000..9741d55 --- /dev/null +++ b/SESSION.html @@ -0,0 +1,638 @@ + +NA • FreesearchR + Skip to contents + + +
+
+
+ + + + +
——————————– R environment ———————————
|setting |value | |:———–|:——————————————| |version |R version 4.4.1 (2024-06-14) | |os |macOS 15.3.1 | |system |aarch64, darwin20 | |ui |RStudio | |language |(EN) | |collate |en_US.UTF-8 | |ctype |en_US.UTF-8 | |tz |Europe/Copenhagen | |date |2025-04-23 | |rstudio |2024.12.1+563 Kousa Dogwood (desktop) | |pandoc |3.6.4 @ /opt/homebrew/bin/ (via rmarkdown) | |quarto |1.6.40 @ /usr/local/bin/quarto | |FreesearchR |25.4.3.250423 |
+

———————————– packages ———————————–

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
packageloadedversiondatesource
apexcharter0.4.42024-09-06CRAN (R 4.4.1)
askpass1.2.12024-10-04CRAN (R 4.4.1)
assertthat0.2.12019-03-21CRAN (R 4.4.1)
backports1.5.02024-05-23CRAN (R 4.4.1)
bayestestR0.15.22025-02-07CRAN (R 4.4.1)
bit4.6.02025-03-06CRAN (R 4.4.1)
bit644.6.0-12025-01-16CRAN (R 4.4.1)
boot1.3-312024-08-28CRAN (R 4.4.1)
broom1.0.82025-03-28CRAN (R 4.4.1)
broom.helpers1.20.02025-03-06CRAN (R 4.4.1)
bsicons0.1.22023-11-04CRAN (R 4.4.0)
bslib0.9.02025-01-30CRAN (R 4.4.1)
cachem1.1.02024-05-16CRAN (R 4.4.1)
cellranger1.1.02016-07-27CRAN (R 4.4.0)
class7.3-232025-01-01CRAN (R 4.4.1)
classInt0.4-112025-01-08CRAN (R 4.4.1)
cli3.6.42025-02-13CRAN (R 4.4.1)
colorspace2.1-12024-07-26CRAN (R 4.4.1)
commonmark1.9.52025-03-17CRAN (R 4.4.1)
correlation0.8.72025-03-03CRAN (R 4.4.1)
crayon1.5.32024-06-20CRAN (R 4.4.1)
credentials2.0.22024-10-04CRAN (R 4.4.1)
crosstalk1.2.12023-11-23CRAN (R 4.4.0)
data.table1.17.02025-02-22CRAN (R 4.4.1)
datamods1.5.32024-10-02CRAN (R 4.4.1)
datawizard1.0.22025-03-24CRAN (R 4.4.1)
desc1.4.32023-12-10CRAN (R 4.4.1)
devtools2.4.52022-10-11CRAN (R 4.4.0)
DHARMa0.4.72024-10-18CRAN (R 4.4.1)
digest0.6.372024-08-19CRAN (R 4.4.1)
dplyr1.1.42023-11-17CRAN (R 4.4.0)
DT0.332024-04-04CRAN (R 4.4.0)
e10711.7-162024-09-16CRAN (R 4.4.1)
easystats0.7.42025-02-06CRAN (R 4.4.1)
effectsize1.0.02024-12-10CRAN (R 4.4.1)
ellipsis0.3.22021-04-29CRAN (R 4.4.1)
esquisse2.1.02025-02-21CRAN (R 4.4.1)
evaluate1.0.32025-01-10CRAN (R 4.4.1)
farver2.1.22024-05-13CRAN (R 4.4.1)
fastmap1.2.02024-05-15CRAN (R 4.4.1)
fontawesome0.5.32024-11-16CRAN (R 4.4.1)
forcats1.0.02023-01-29CRAN (R 4.4.0)
FreesearchR25.4.3NANA
fs1.6.62025-04-12CRAN (R 4.4.1)
generics0.1.32022-07-05CRAN (R 4.4.1)
gert2.1.52025-03-25CRAN (R 4.4.1)
ggplot23.5.22025-04-09CRAN (R 4.4.1)
glue1.8.02024-09-30CRAN (R 4.4.1)
gt1.0.02025-04-05CRAN (R 4.4.1)
gtable0.3.62024-10-25CRAN (R 4.4.1)
gtsummary2.2.02025-04-14CRAN (R 4.4.1)
haven2.5.42023-11-30CRAN (R 4.4.0)
here1.0.12020-12-13CRAN (R 4.4.1)
hms1.1.32023-03-21CRAN (R 4.4.0)
htmltools0.5.8.12024-04-04CRAN (R 4.4.1)
htmlwidgets1.6.42023-12-06CRAN (R 4.4.0)
httpuv1.6.162025-04-16CRAN (R 4.4.1)
IDEAFilter0.2.02024-04-15CRAN (R 4.4.0)
insight1.2.02025-04-22CRAN (R 4.4.1)
jquerylib0.1.42021-04-26CRAN (R 4.4.0)
jsonlite2.0.02025-03-27CRAN (R 4.4.1)
KernSmooth2.23-262025-01-01CRAN (R 4.4.1)
knitr1.502025-03-16CRAN (R 4.4.1)
later1.4.22025-04-08CRAN (R 4.4.1)
lattice0.22-72025-04-02CRAN (R 4.4.1)
lifecycle1.0.42023-11-07CRAN (R 4.4.1)
lme41.1-372025-03-26CRAN (R 4.4.1)
magrittr2.0.32022-03-30CRAN (R 4.4.1)
MASS7.3-652025-02-28CRAN (R 4.4.1)
Matrix1.7-32025-03-11CRAN (R 4.4.1)
memoise2.0.12021-11-26CRAN (R 4.4.0)
mime0.132025-03-17CRAN (R 4.4.1)
miniUI0.1.22025-04-17CRAN (R 4.4.1)
minqa1.2.82024-08-17CRAN (R 4.4.1)
modelbased0.10.02025-03-10CRAN (R 4.4.1)
munsell0.5.12024-04-01CRAN (R 4.4.1)
nlme3.1-1682025-03-31CRAN (R 4.4.1)
nloptr2.2.12025-03-17CRAN (R 4.4.1)
openssl2.3.22025-02-03CRAN (R 4.4.1)
openxlsx21.142025-03-20CRAN (R 4.4.1)
parameters0.24.22025-03-04CRAN (R 4.4.1)
patchwork1.3.02024-09-16CRAN (R 4.4.1)
performance0.13.02025-01-15CRAN (R 4.4.1)
phosphoricons0.2.12024-04-08CRAN (R 4.4.0)
pillar1.10.22025-04-05CRAN (R 4.4.1)
pkgbuild1.4.72025-03-24CRAN (R 4.4.1)
pkgconfig2.0.32019-09-22CRAN (R 4.4.1)
pkgload1.4.02024-06-28CRAN (R 4.4.0)
processx3.8.62025-02-21CRAN (R 4.4.1)
profvis0.4.02024-09-20CRAN (R 4.4.1)
promises1.3.22024-11-28CRAN (R 4.4.1)
proxy0.4-272022-06-09CRAN (R 4.4.1)
ps1.9.12025-04-12CRAN (R 4.4.1)
purrr1.0.42025-02-05CRAN (R 4.4.1)
quarto1.4.42024-07-20CRAN (R 4.4.0)
R62.6.12025-02-15CRAN (R 4.4.1)
rbibutils2.32024-10-04CRAN (R 4.4.1)
RColorBrewer1.1-32022-04-03CRAN (R 4.4.1)
Rcpp1.0.142025-01-12CRAN (R 4.4.1)
Rdpack2.6.42025-04-09CRAN (R 4.4.1)
reactable0.4.42023-03-12CRAN (R 4.4.0)
readODS2.3.22025-01-13CRAN (R 4.4.1)
readr2.1.52024-01-10CRAN (R 4.4.0)
readxl1.4.52025-03-07CRAN (R 4.4.1)
reformulas0.4.02024-11-03CRAN (R 4.4.1)
remotes2.5.02024-03-17CRAN (R 4.4.1)
renv1.1.42025-03-20CRAN (R 4.4.1)
report0.6.12025-02-07CRAN (R 4.4.1)
rio1.2.32024-09-25CRAN (R 4.4.1)
rlang1.1.62025-04-11CRAN (R 4.4.1)
rmarkdown2.292024-11-04CRAN (R 4.4.1)
rprojroot2.0.42023-11-05CRAN (R 4.4.1)
rsconnect1.3.42025-01-22CRAN (R 4.4.1)
rstudioapi0.17.12024-10-22CRAN (R 4.4.1)
sass0.4.102025-04-11CRAN (R 4.4.1)
scales1.3.02023-11-28CRAN (R 4.4.0)
see0.11.02025-03-11CRAN (R 4.4.1)
sessioninfo1.2.32025-02-05CRAN (R 4.4.1)
shiny1.10.02024-12-14CRAN (R 4.4.1)
shinybusy0.3.32024-03-09CRAN (R 4.4.0)
shinyTime1.0.32022-08-19CRAN (R 4.4.0)
shinyWidgets0.9.02025-02-21CRAN (R 4.4.1)
stringi1.8.72025-03-27CRAN (R 4.4.1)
sys3.4.32024-10-04CRAN (R 4.4.1)
tibble3.2.12023-03-20CRAN (R 4.4.0)
tidyr1.3.12024-01-24CRAN (R 4.4.1)
tidyselect1.2.12024-03-11CRAN (R 4.4.0)
toastui0.4.02025-04-03CRAN (R 4.4.1)
tzdb0.5.02025-03-15CRAN (R 4.4.1)
urlchecker1.0.12021-11-30CRAN (R 4.4.1)
usethis3.1.02024-11-26CRAN (R 4.4.1)
vctrs0.6.52023-12-01CRAN (R 4.4.0)
vroom1.6.52023-12-05CRAN (R 4.4.0)
whisker0.4.12022-12-05CRAN (R 4.4.1)
withr3.0.22024-10-28CRAN (R 4.4.1)
writexl1.5.42025-04-15CRAN (R 4.4.1)
xfun0.522025-04-02CRAN (R 4.4.1)
xml21.3.82025-03-14CRAN (R 4.4.1)
xtable1.8-42019-04-21CRAN (R 4.4.1)
yaml2.3.102024-07-26CRAN (R 4.4.1)
zip2.3.22025-02-01CRAN (R 4.4.1)
+ + +
+ + +
+ + + + + + + diff --git a/articles/FreesearchR.html b/articles/FreesearchR.html index 7f51cf3..b23d5ca 100644 --- a/articles/FreesearchR.html +++ b/articles/FreesearchR.html @@ -38,6 +38,8 @@ diff --git a/articles/data-types.html b/articles/data-types.html index 899b5dc..652d1a1 100644 --- a/articles/data-types.html +++ b/articles/data-types.html @@ -38,6 +38,8 @@ diff --git a/articles/index.html b/articles/index.html index 35e5a3b..14f6a35 100644 --- a/articles/index.html +++ b/articles/index.html @@ -20,6 +20,8 @@ @@ -46,6 +48,10 @@
FreesearchR
+
Session info
+
+
On visuals
+
diff --git a/articles/session.html b/articles/session.html new file mode 100644 index 0000000..823cb85 --- /dev/null +++ b/articles/session.html @@ -0,0 +1,1035 @@ + + + + + + + +Session info • FreesearchR + + + + + + + + + + + Skip to contents + + +
+ + + + +
+
+ + + +
+library(FreesearchR)
+#> 
+#> Attaching package: 'FreesearchR'
+#> The following object is masked from 'package:base':
+#> 
+#>     sort_by
+

This is the session info on the primary build machine. Inspect loaded +packages and the latest build info.

+
+

Platform info +

+
+FreesearchR:::session_data$platform |> knitr::kable()
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
optionvalue
versionR version 4.4.1 (2024-06-14)
osmacOS 15.3.1
systemaarch64, darwin20
uiRStudio
language(EN)
collateen_US.UTF-8
ctypeen_US.UTF-8
tzEurope/Copenhagen
date2025-04-23
rstudio2024.12.1+563 Kousa Dogwood (desktop)
pandoc3.6.4 @ /opt/homebrew/bin/ (via rmarkdown)
quarto1.6.40 @ /usr/local/bin/quarto
FreesearchR25.4.3.250423
+
+
+

Libraries +

+
+FreesearchR:::session_data$libs|> knitr::kable()
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
packageloadedversiondatesource
apexcharter0.4.42024-09-06CRAN (R 4.4.1)
askpass1.2.12024-10-04CRAN (R 4.4.1)
assertthat0.2.12019-03-21CRAN (R 4.4.1)
backports1.5.02024-05-23CRAN (R 4.4.1)
bayestestR0.15.22025-02-07CRAN (R 4.4.1)
bit4.6.02025-03-06CRAN (R 4.4.1)
bit644.6.0-12025-01-16CRAN (R 4.4.1)
boot1.3-312024-08-28CRAN (R 4.4.1)
broom1.0.82025-03-28CRAN (R 4.4.1)
broom.helpers1.20.02025-03-06CRAN (R 4.4.1)
bsicons0.1.22023-11-04CRAN (R 4.4.0)
bslib0.9.02025-01-30CRAN (R 4.4.1)
cachem1.1.02024-05-16CRAN (R 4.4.1)
cellranger1.1.02016-07-27CRAN (R 4.4.0)
class7.3-232025-01-01CRAN (R 4.4.1)
classInt0.4-112025-01-08CRAN (R 4.4.1)
cli3.6.42025-02-13CRAN (R 4.4.1)
colorspace2.1-12024-07-26CRAN (R 4.4.1)
commonmark1.9.52025-03-17CRAN (R 4.4.1)
correlation0.8.72025-03-03CRAN (R 4.4.1)
crayon1.5.32024-06-20CRAN (R 4.4.1)
credentials2.0.22024-10-04CRAN (R 4.4.1)
crosstalk1.2.12023-11-23CRAN (R 4.4.0)
data.table1.17.02025-02-22CRAN (R 4.4.1)
datamods1.5.32024-10-02CRAN (R 4.4.1)
datawizard1.0.22025-03-24CRAN (R 4.4.1)
desc1.4.32023-12-10CRAN (R 4.4.1)
devtools2.4.52022-10-11CRAN (R 4.4.0)
DHARMa0.4.72024-10-18CRAN (R 4.4.1)
digest0.6.372024-08-19CRAN (R 4.4.1)
dplyr1.1.42023-11-17CRAN (R 4.4.0)
DT0.332024-04-04CRAN (R 4.4.0)
e10711.7-162024-09-16CRAN (R 4.4.1)
easystats0.7.42025-02-06CRAN (R 4.4.1)
effectsize1.0.02024-12-10CRAN (R 4.4.1)
ellipsis0.3.22021-04-29CRAN (R 4.4.1)
esquisse2.1.02025-02-21CRAN (R 4.4.1)
evaluate1.0.32025-01-10CRAN (R 4.4.1)
farver2.1.22024-05-13CRAN (R 4.4.1)
fastmap1.2.02024-05-15CRAN (R 4.4.1)
fontawesome0.5.32024-11-16CRAN (R 4.4.1)
forcats1.0.02023-01-29CRAN (R 4.4.0)
FreesearchR25.4.3NANA
fs1.6.62025-04-12CRAN (R 4.4.1)
generics0.1.32022-07-05CRAN (R 4.4.1)
gert2.1.52025-03-25CRAN (R 4.4.1)
ggplot23.5.22025-04-09CRAN (R 4.4.1)
glue1.8.02024-09-30CRAN (R 4.4.1)
gt1.0.02025-04-05CRAN (R 4.4.1)
gtable0.3.62024-10-25CRAN (R 4.4.1)
gtsummary2.2.02025-04-14CRAN (R 4.4.1)
haven2.5.42023-11-30CRAN (R 4.4.0)
here1.0.12020-12-13CRAN (R 4.4.1)
hms1.1.32023-03-21CRAN (R 4.4.0)
htmltools0.5.8.12024-04-04CRAN (R 4.4.1)
htmlwidgets1.6.42023-12-06CRAN (R 4.4.0)
httpuv1.6.162025-04-16CRAN (R 4.4.1)
IDEAFilter0.2.02024-04-15CRAN (R 4.4.0)
insight1.2.02025-04-22CRAN (R 4.4.1)
jquerylib0.1.42021-04-26CRAN (R 4.4.0)
jsonlite2.0.02025-03-27CRAN (R 4.4.1)
KernSmooth2.23-262025-01-01CRAN (R 4.4.1)
knitr1.502025-03-16CRAN (R 4.4.1)
later1.4.22025-04-08CRAN (R 4.4.1)
lattice0.22-72025-04-02CRAN (R 4.4.1)
lifecycle1.0.42023-11-07CRAN (R 4.4.1)
lme41.1-372025-03-26CRAN (R 4.4.1)
magrittr2.0.32022-03-30CRAN (R 4.4.1)
MASS7.3-652025-02-28CRAN (R 4.4.1)
Matrix1.7-32025-03-11CRAN (R 4.4.1)
memoise2.0.12021-11-26CRAN (R 4.4.0)
mime0.132025-03-17CRAN (R 4.4.1)
miniUI0.1.22025-04-17CRAN (R 4.4.1)
minqa1.2.82024-08-17CRAN (R 4.4.1)
modelbased0.10.02025-03-10CRAN (R 4.4.1)
munsell0.5.12024-04-01CRAN (R 4.4.1)
nlme3.1-1682025-03-31CRAN (R 4.4.1)
nloptr2.2.12025-03-17CRAN (R 4.4.1)
openssl2.3.22025-02-03CRAN (R 4.4.1)
openxlsx21.142025-03-20CRAN (R 4.4.1)
parameters0.24.22025-03-04CRAN (R 4.4.1)
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+
+
+
+ + + + +
+ + + + + + + diff --git a/articles/visuals.html b/articles/visuals.html new file mode 100644 index 0000000..ed8d656 --- /dev/null +++ b/articles/visuals.html @@ -0,0 +1,212 @@ + + + + + + + +On visuals • FreesearchR + + + + + + + + + + + Skip to contents + + +
+ + + + +
+
+ + + +
+library(FreesearchR)
+#> 
+#> Attaching package: 'FreesearchR'
+#> The following object is masked from 'package:base':
+#> 
+#>     sort_by
+
+

Basic visualisations +

+

The goal of FreesearchR is to keep things +simple. Visuals can get very complicated. We provide a selection of +plots, that helps visualise typical clinical and will be enough for most +use cases, and for publishing to most journals.

+

If you want to go further, have a look at these sites with +suggestions and sample code for data plotting:

+ +
+

Available plots +

+

Below are the available plot types listed.

+ +++++ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Data typePlot typeDescription
continuousViolin plotA modern alternative to the classic boxplot to +visualise data distribution
continuousScatter plotA classic way of showing the association between to +variables
continuousBox plotA classic way to plot data distribution by groups
dichotomousStacked horizontal barsA classical way of visualising the distribution of an +ordinal scale like the modified Ranking Scale and known as Grotta +bars
dichotomousViolin plotA modern alternative to the classic boxplot to +visualise data distribution
dichotomousSankey plotA way of visualising change between groups
dichotomousBox plotA classic way to plot data distribution by groups
dichotomousEuler diagramGenerate area-proportional Euler diagrams to display +set relationships
categoricalStacked horizontal barsA classical way of visualising the distribution of an +ordinal scale like the modified Ranking Scale and known as Grotta +bars
categoricalViolin plotA modern alternative to the classic boxplot to +visualise data distribution
categoricalSankey plotA way of visualising change between groups
categoricalBox plotA classic way to plot data distribution by groups
+
+
+
+
+ + + + +
+ + + + + + + diff --git a/authors.html b/authors.html index 215852e..6b8c784 100644 --- a/authors.html +++ b/authors.html @@ -20,6 +20,8 @@ diff --git a/index.html b/index.html index 9ebf1c3..d48ac5b 100644 --- a/index.html +++ b/index.html @@ -40,6 +40,8 @@ @@ -59,7 +61,7 @@
-
diff --git a/reference/gg_theme_export.html b/reference/gg_theme_export.html index bf8fa63..2795170 100644 --- a/reference/gg_theme_export.html +++ b/reference/gg_theme_export.html @@ -20,6 +20,8 @@ diff --git a/reference/gg_theme_shiny.html b/reference/gg_theme_shiny.html index 3d5d1c2..b2f3755 100644 --- a/reference/gg_theme_shiny.html +++ b/reference/gg_theme_shiny.html @@ -20,6 +20,8 @@ diff --git a/reference/ggeulerr.html b/reference/ggeulerr.html index 4db62c4..7e1f034 100644 --- a/reference/ggeulerr.html +++ b/reference/ggeulerr.html @@ -24,6 +24,8 @@ but plots it using ggplot2"> diff --git a/reference/grepl_fix.html b/reference/grepl_fix.html index 2461ba0..330f2c7 100644 --- a/reference/grepl_fix.html +++ b/reference/grepl_fix.html @@ -20,6 +20,8 @@ diff --git a/reference/if_not_missing.html b/reference/if_not_missing.html index ff3e94f..99689af 100644 --- a/reference/if_not_missing.html +++ b/reference/if_not_missing.html @@ -20,6 +20,8 @@ diff --git a/reference/import-file-type.html b/reference/import-file-type.html index 5f73eb7..9afa57c 100644 --- a/reference/import-file-type.html +++ b/reference/import-file-type.html @@ -20,6 +20,8 @@ diff --git a/reference/import-file.html b/reference/import-file.html index 8f72e12..fb3bf8f 100644 --- a/reference/import-file.html +++ b/reference/import-file.html @@ -20,6 +20,8 @@ diff --git a/reference/import-file_module.html b/reference/import-file_module.html index 9d8021f..932c956 100644 --- a/reference/import-file_module.html +++ b/reference/import-file_module.html @@ -20,6 +20,8 @@ diff --git a/reference/index.html b/reference/index.html index 982eb49..3b97156 100644 --- a/reference/index.html +++ b/reference/index.html @@ -20,6 +20,8 @@ diff --git a/reference/index_embed.html b/reference/index_embed.html index ab744bc..32f646b 100644 --- a/reference/index_embed.html +++ b/reference/index_embed.html @@ -20,6 +20,8 @@ diff --git a/reference/is_any_class.html b/reference/is_any_class.html index 91a207b..dbb4d1c 100644 --- a/reference/is_any_class.html +++ b/reference/is_any_class.html @@ -20,6 +20,8 @@ diff --git a/reference/is_consecutive.html b/reference/is_consecutive.html index 0cabf59..d77a0d0 100644 --- a/reference/is_consecutive.html +++ b/reference/is_consecutive.html @@ -20,6 +20,8 @@ diff --git a/reference/is_datetime.html b/reference/is_datetime.html index 21f18a6..6fcbfe4 100644 --- a/reference/is_datetime.html +++ b/reference/is_datetime.html @@ -20,6 +20,8 @@ diff --git a/reference/is_identical_to_previous.html b/reference/is_identical_to_previous.html index 57791f4..c198be5 100644 --- a/reference/is_identical_to_previous.html +++ b/reference/is_identical_to_previous.html @@ -20,6 +20,8 @@ diff --git a/reference/is_valid_redcap_url.html b/reference/is_valid_redcap_url.html index 7da1040..398d8cc 100644 --- a/reference/is_valid_redcap_url.html +++ b/reference/is_valid_redcap_url.html @@ -20,6 +20,8 @@ diff --git a/reference/is_valid_token.html b/reference/is_valid_token.html index 5203dc7..9b37eb6 100644 --- a/reference/is_valid_token.html +++ b/reference/is_valid_token.html @@ -20,6 +20,8 @@ diff --git a/reference/launch_FreesearchR.html b/reference/launch_FreesearchR.html index 09f2bc1..d381a9c 100644 --- a/reference/launch_FreesearchR.html +++ b/reference/launch_FreesearchR.html @@ -20,6 +20,8 @@ diff --git a/reference/limit_log.html b/reference/limit_log.html index 074ea6b..b92ab4d 100644 --- a/reference/limit_log.html +++ b/reference/limit_log.html @@ -20,6 +20,8 @@ diff --git a/reference/line_break.html b/reference/line_break.html index 1d16ab9..0937ebc 100644 --- a/reference/line_break.html +++ b/reference/line_break.html @@ -20,6 +20,8 @@ diff --git a/reference/merge_expression.html b/reference/merge_expression.html index 923dc46..c63a83f 100644 --- a/reference/merge_expression.html +++ b/reference/merge_expression.html @@ -20,6 +20,8 @@ diff --git a/reference/merge_long.html b/reference/merge_long.html index 1c49b3c..e8ec8ad 100644 --- a/reference/merge_long.html +++ b/reference/merge_long.html @@ -20,6 +20,8 @@ diff --git a/reference/missing_fraction.html b/reference/missing_fraction.html index 3411175..1a9c440 100644 --- a/reference/missing_fraction.html +++ b/reference/missing_fraction.html @@ -20,6 +20,8 @@ diff --git a/reference/modify_qmd.html b/reference/modify_qmd.html index 0346155..efb0a76 100644 --- a/reference/modify_qmd.html +++ b/reference/modify_qmd.html @@ -20,6 +20,8 @@ diff --git a/reference/overview_vars.html b/reference/overview_vars.html index d8a5454..0f84988 100644 --- a/reference/overview_vars.html +++ b/reference/overview_vars.html @@ -20,6 +20,8 @@ diff --git a/reference/pipe_string.html b/reference/pipe_string.html index 7f0cd84..2846c20 100644 --- a/reference/pipe_string.html +++ b/reference/pipe_string.html @@ -20,6 +20,8 @@ diff --git a/reference/plot.tbl_regression.html b/reference/plot.tbl_regression.html index 2d6a036..e9ea303 100644 --- a/reference/plot.tbl_regression.html +++ b/reference/plot.tbl_regression.html @@ -20,6 +20,8 @@ diff --git a/reference/plot_euler.html b/reference/plot_euler.html index 76c73fd..11b7290 100644 --- a/reference/plot_euler.html +++ b/reference/plot_euler.html @@ -20,6 +20,8 @@ diff --git a/reference/plot_euler_single.html b/reference/plot_euler_single.html index 6dd0456..a0d1018 100644 --- a/reference/plot_euler_single.html +++ b/reference/plot_euler_single.html @@ -20,6 +20,8 @@ diff --git a/reference/plot_sankey_single-1.png b/reference/plot_sankey_single-1.png index b70f2f7..c82770b 100644 Binary files a/reference/plot_sankey_single-1.png and b/reference/plot_sankey_single-1.png differ diff --git a/reference/plot_sankey_single-2.png b/reference/plot_sankey_single-2.png index 90831f2..4f02fce 100644 Binary files a/reference/plot_sankey_single-2.png and b/reference/plot_sankey_single-2.png differ diff --git a/reference/plot_sankey_single-3.png b/reference/plot_sankey_single-3.png index 90831f2..6d05a87 100644 Binary files a/reference/plot_sankey_single-3.png and b/reference/plot_sankey_single-3.png differ diff --git a/reference/plot_sankey_single.html b/reference/plot_sankey_single.html index 14a7294..9999d74 100644 --- a/reference/plot_sankey_single.html +++ b/reference/plot_sankey_single.html @@ -20,6 +20,8 @@ @@ -82,20 +84,39 @@ in primary group and color for each level in secondary group.

Examples

ds <- data.frame(g = sample(LETTERS[1:2], 100, TRUE), first = REDCapCAST::as_factor(sample(letters[1:4], 100, TRUE)), last = REDCapCAST::as_factor(sample(letters[1:4], 100, TRUE)))
 ds |> plot_sankey_single("first", "last")
-#> Loading required package: ggplot2
 #> Warning: Some strata appear at multiple axes.
 #> Warning: Some strata appear at multiple axes.
 #> Warning: Some strata appear at multiple axes.
 
-ds |> plot_sankey_single("first", "last", color.group = "y")
-#> Error in match.arg(color.group): 'arg' should be one of “pri”, “sec”
+ds |> plot_sankey_single("first", "last", color.group = "sec")
+#> Warning: Some strata appear at multiple axes.
+#> Warning: Some strata appear at multiple axes.
+#> Warning: Some strata appear at multiple axes.
+
 data.frame(
   g = sample(LETTERS[1:2], 100, TRUE),
   first = REDCapCAST::as_factor(sample(letters[1:4], 100, TRUE)),
   last = sample(c(TRUE, FALSE, FALSE), 100, TRUE)
 ) |>
   plot_sankey_single("first", "last", color.group = "pri")
-
+
+mtcars |>
+  default_parsing() |>
+  str()
+#> tibble [32 × 11] (S3: tbl_df/tbl/data.frame)
+#>  $ mpg : num [1:32] 21 21 22.8 21.4 18.7 18.1 14.3 24.4 22.8 19.2 ...
+#>  $ cyl : Factor w/ 3 levels "4","6","8": 2 2 1 2 3 2 3 1 1 2 ...
+#>  $ disp: num [1:32] 160 160 108 258 360 ...
+#>  $ hp  : num [1:32] 110 110 93 110 175 105 245 62 95 123 ...
+#>  $ drat: num [1:32] 3.9 3.9 3.85 3.08 3.15 2.76 3.21 3.69 3.92 3.92 ...
+#>  $ wt  : num [1:32] 2.62 2.88 2.32 3.21 3.44 ...
+#>  $ qsec: num [1:32] 16.5 17 18.6 19.4 17 ...
+#>  $ vs  : logi [1:32] FALSE FALSE TRUE TRUE FALSE TRUE ...
+#>  $ am  : logi [1:32] TRUE TRUE TRUE FALSE FALSE FALSE ...
+#>  $ gear: Factor w/ 3 levels "3","4","5": 2 2 2 1 1 1 1 2 2 2 ...
+#>  $ carb: Factor w/ 6 levels "1","2","3","4",..: 4 4 1 1 2 1 4 2 2 4 ...
+plot_sankey_single("cyl", "vs", color.group = "pri")
+#> Error in plot_sankey_single("cyl", "vs", color.group = "pri"): argument "sec" is missing, with no default