diff --git a/CODE_OF_CONDUCT.html b/CODE_OF_CONDUCT.html index be7f7319..9470c495 100644 --- a/CODE_OF_CONDUCT.html +++ b/CODE_OF_CONDUCT.html @@ -38,7 +38,7 @@

Contributor Covenant Code of Conduct

- Source: CODE_OF_CONDUCT.md + Source: CODE_OF_CONDUCT.md
diff --git a/LICENSE.html b/LICENSE.html index c3ca36af..5c8dbd79 100644 --- a/LICENSE.html +++ b/LICENSE.html @@ -38,7 +38,7 @@

GNU Affero General Public License

- Source: LICENSE.md + Source: LICENSE.md
diff --git a/QA.html b/QA.html index 3e2a2246..37dac51e 100644 --- a/QA.html +++ b/QA.html @@ -38,7 +38,7 @@

Questions and answers

- Source: QA.md + Source: QA.md
diff --git a/ROADMAP.html b/ROADMAP.html index f0b690af..2fb5c2c9 100644 --- a/ROADMAP.html +++ b/ROADMAP.html @@ -38,7 +38,7 @@

Project roadmap

- Source: ROADMAP.md + Source: ROADMAP.md
diff --git a/SESSION.html b/SESSION.html index 4b220ba7..1ec26b9d 100644 --- a/SESSION.html +++ b/SESSION.html @@ -38,7 +38,7 @@

NA

- Source: SESSION.md + Source: SESSION.md
diff --git a/articles/FreesearchR.html b/articles/FreesearchR.html index 01d4f990..886e20b7 100644 --- a/articles/FreesearchR.html +++ b/articles/FreesearchR.html @@ -73,7 +73,7 @@

FreesearchR

- Source: vignettes/FreesearchR.Rmd + Source: vignettes/FreesearchR.Rmd
FreesearchR.Rmd
diff --git a/articles/data-types.html b/articles/data-types.html index 59025b54..264f18e0 100644 --- a/articles/data-types.html +++ b/articles/data-types.html @@ -73,7 +73,7 @@

Data types

- Source: vignettes/data-types.Rmd + Source: vignettes/data-types.Rmd
data-types.Rmd
diff --git a/articles/missingness.html b/articles/missingness.html index 0485ac26..adeb65a8 100644 --- a/articles/missingness.html +++ b/articles/missingness.html @@ -73,7 +73,7 @@

Missingness in data

- Source: vignettes/missingness.Rmd + Source: vignettes/missingness.Rmd
missingness.Rmd
diff --git a/articles/session.html b/articles/session.html index 7e346e6d..3bbb9560 100644 --- a/articles/session.html +++ b/articles/session.html @@ -73,7 +73,7 @@

Session info

- Source: vignettes/session.Rmd + Source: vignettes/session.Rmd
session.Rmd
diff --git a/articles/visuals.html b/articles/visuals.html index 95d53699..0795f042 100644 --- a/articles/visuals.html +++ b/articles/visuals.html @@ -73,7 +73,7 @@

On visuals

- Source: vignettes/visuals.Rmd + Source: vignettes/visuals.Rmd
visuals.Rmd
diff --git a/authors.html b/authors.html index 3840199f..fe2ee876 100644 --- a/authors.html +++ b/authors.html @@ -59,7 +59,7 @@

Citation

-

Source: DESCRIPTION

+

Source: DESCRIPTION

Damsbo A (2025). FreesearchR: Easy data analysis for clinicians. diff --git a/authors.md b/authors.md index dbfd3dba..f4d65c22 100644 --- a/authors.md +++ b/authors.md @@ -12,7 +12,7 @@ ## Citation Source: -[`DESCRIPTION`](https://github.com/agdamsbo/FreesearchR/blob/main/DESCRIPTION) +[`DESCRIPTION`](https://github.com/agdamsbo/FreesearchR/blob/v25.12.3/DESCRIPTION) Damsbo A (2025). *FreesearchR: Easy data analysis for clinicians*. R package version 25.12.3, . diff --git a/news/index.html b/news/index.html index 3d874661..3ae3a126 100644 --- a/news/index.html +++ b/news/index.html @@ -38,7 +38,7 @@

Changelog

- Source: NEWS.md + Source: NEWS.md
diff --git a/pkgdown.yml b/pkgdown.yml index e2b3dd00..b86a7868 100644 --- a/pkgdown.yml +++ b/pkgdown.yml @@ -7,7 +7,7 @@ articles: missingness: missingness.html session: session.html visuals: visuals.html -last_built: 2025-12-11T08:51Z +last_built: 2025-12-11T16:37Z urls: reference: https://agdamsbo.github.io/FreesearchR/reference article: https://agdamsbo.github.io/FreesearchR/articles diff --git a/reference/FreesearchR_palette.html b/reference/FreesearchR_palette.html index 6332f818..6152bc0d 100644 --- a/reference/FreesearchR_palette.html +++ b/reference/FreesearchR_palette.html @@ -38,7 +38,7 @@

Use the FreesearchR colors

- Source: R/theme.R + Source: R/theme.R
FreesearchR_palette.Rd
diff --git a/reference/add_class_icon.html b/reference/add_class_icon.html index 6916f557..bbc5cec1 100644 --- a/reference/add_class_icon.html +++ b/reference/add_class_icon.html @@ -38,7 +38,7 @@

Convert class grid column to icon

- Source: R/data-summary.R + Source: R/data-summary.R
add_class_icon.Rd
diff --git a/reference/add_sparkline.html b/reference/add_sparkline.html index f0f5b308..1081b5ef 100644 --- a/reference/add_sparkline.html +++ b/reference/add_sparkline.html @@ -38,7 +38,7 @@

Add sparkline to datagrid

- Source: R/data-summary.R + Source: R/data-summary.R
add_sparkline.Rd
diff --git a/reference/align_axes.html b/reference/align_axes.html index d7e59a68..abe848b1 100644 --- a/reference/align_axes.html +++ b/reference/align_axes.html @@ -38,7 +38,7 @@

Aligns axes between plots

- Source: R/data_plots.R + Source: R/data_plots.R
align_axes.Rd
diff --git a/reference/all_but.html b/reference/all_but.html index 995587f6..73148e24 100644 --- a/reference/all_but.html +++ b/reference/all_but.html @@ -38,7 +38,7 @@

Select all from vector but

- Source: R/data_plots.R + Source: R/data_plots.R
all_but.Rd
diff --git a/reference/append_column.html b/reference/append_column.html index 007cec3d..1e2b37a7 100644 --- a/reference/append_column.html +++ b/reference/append_column.html @@ -38,7 +38,7 @@

Append a column to a data.frame

- Source: R/helpers.R + Source: R/helpers.R
append_column.Rd
diff --git a/reference/append_list.html b/reference/append_list.html index bd643d23..336ee778 100644 --- a/reference/append_list.html +++ b/reference/append_list.html @@ -38,7 +38,7 @@

Append list with named index

- Source: R/helpers.R + Source: R/helpers.R
append_list.Rd
diff --git a/reference/argsstring2list.html b/reference/argsstring2list.html index dd0a76c4..52d96db6 100644 --- a/reference/argsstring2list.html +++ b/reference/argsstring2list.html @@ -38,7 +38,7 @@

Convert string of arguments to list of arguments

- Source: R/helpers.R + Source: R/helpers.R
argsstring2list.Rd
diff --git a/reference/baseline_table.html b/reference/baseline_table.html index 50932116..0e66c322 100644 --- a/reference/baseline_table.html +++ b/reference/baseline_table.html @@ -38,7 +38,7 @@

Print a flexible baseline characteristics table

- Source: R/baseline_table.R + Source: R/baseline_table.R
baseline_table.Rd
diff --git a/reference/class_icons.html b/reference/class_icons.html index f90cc84f..975c8f04 100644 --- a/reference/class_icons.html +++ b/reference/class_icons.html @@ -38,7 +38,7 @@

Get data class icons

- Source: R/data-summary.R + Source: R/data-summary.R
class_icons.Rd
diff --git a/reference/clean_common_axis.html b/reference/clean_common_axis.html index 4dc870a0..53b594c4 100644 --- a/reference/clean_common_axis.html +++ b/reference/clean_common_axis.html @@ -38,7 +38,7 @@

Extract and clean axis ranges

- Source: R/data_plots.R + Source: R/data_plots.R
clean_common_axis.Rd
diff --git a/reference/clean_date.html b/reference/clean_date.html index bdec0d00..6928bbdf 100644 --- a/reference/clean_date.html +++ b/reference/clean_date.html @@ -38,7 +38,7 @@

Attempts at applying uniform date format

- Source: R/update-variables-ext.R + Source: R/update-variables-ext.R
clean_date.Rd
diff --git a/reference/clean_sep.html b/reference/clean_sep.html index f36b58bd..ad68e1ad 100644 --- a/reference/clean_sep.html +++ b/reference/clean_sep.html @@ -38,7 +38,7 @@

gsub wrapper for piping with default values for separator substituting

- Source: R/update-variables-ext.R + Source: R/update-variables-ext.R
clean_sep.Rd
diff --git a/reference/collapse_spaces.html b/reference/collapse_spaces.html index 32d8e996..bbff1f91 100644 --- a/reference/collapse_spaces.html +++ b/reference/collapse_spaces.html @@ -40,7 +40,7 @@ but it works">

Substitue spaces/tabs with single space excluding text within quotes

- Source: R/helpers.R + Source: R/helpers.R
collapse_spaces.Rd
diff --git a/reference/columnSelectInput.html b/reference/columnSelectInput.html index f92a5f34..3d6ff4e2 100644 --- a/reference/columnSelectInput.html +++ b/reference/columnSelectInput.html @@ -40,7 +40,7 @@ Adds the option to select "none" which is handled later'>

A selectizeInput customized for data frames with column labels

- Source: R/custom_SelectInput.R + Source: R/custom_SelectInput.R
columnSelectInput.Rd
diff --git a/reference/compare_missings.html b/reference/compare_missings.html index ba2b2907..c38551a0 100644 --- a/reference/compare_missings.html +++ b/reference/compare_missings.html @@ -38,7 +38,7 @@

Pairwise comparison of missings across covariables

- Source: R/missings-module.R + Source: R/missings-module.R
compare_missings.Rd
diff --git a/reference/contrast_text.html b/reference/contrast_text.html index 6a8bb9e2..e52ddf6a 100644 --- a/reference/contrast_text.html +++ b/reference/contrast_text.html @@ -40,7 +40,7 @@ background color.">

Contrast Text Color

- Source: R/contrast_text.R + Source: R/contrast_text.R
contrast_text.Rd
diff --git a/reference/corr_pairs_validate.html b/reference/corr_pairs_validate.html index 7d82f69c..a618e630 100644 --- a/reference/corr_pairs_validate.html +++ b/reference/corr_pairs_validate.html @@ -38,7 +38,7 @@

Correlation pairs validation

- Source: R/validation.R + Source: R/validation.R
corr_pairs_validate.Rd
diff --git a/reference/correlation_pairs.html b/reference/correlation_pairs.html index 7375b808..8e11671f 100644 --- a/reference/correlation_pairs.html +++ b/reference/correlation_pairs.html @@ -38,7 +38,7 @@

Determine significant correlations in the data set

- Source: R/correlations-module.R + Source: R/correlations-module.R
correlation_pairs.Rd
diff --git a/reference/create-column.html b/reference/create-column.html index 6a8b431d..13a1d164 100644 --- a/reference/create-column.html +++ b/reference/create-column.html @@ -38,7 +38,7 @@

Create new column

- Source: R/create-column-mod.R + Source: R/create-column-mod.R
create-column.Rd
diff --git a/reference/create_baseline.html b/reference/create_baseline.html index 2d53c1bb..a223f532 100644 --- a/reference/create_baseline.html +++ b/reference/create_baseline.html @@ -38,7 +38,7 @@

Create a baseline table

- Source: R/baseline_table.R + Source: R/baseline_table.R
create_baseline.Rd
diff --git a/reference/create_log_tics.html b/reference/create_log_tics.html index 4eca4972..0ff411ff 100644 --- a/reference/create_log_tics.html +++ b/reference/create_log_tics.html @@ -38,7 +38,7 @@

Create summetric log ticks

- Source: R/regression_plot.R + Source: R/regression_plot.R
create_log_tics.Rd
diff --git a/reference/create_overview_datagrid.html b/reference/create_overview_datagrid.html index 60241910..58b09ca3 100644 --- a/reference/create_overview_datagrid.html +++ b/reference/create_overview_datagrid.html @@ -38,7 +38,7 @@

Create a data overview datagrid

- Source: R/data-summary.R + Source: R/data-summary.R
create_overview_datagrid.Rd
diff --git a/reference/custom_theme.html b/reference/custom_theme.html index 09ff5fb6..912614b0 100644 --- a/reference/custom_theme.html +++ b/reference/custom_theme.html @@ -38,7 +38,7 @@

Custom theme based on unity

- Source: R/theme.R + Source: R/theme.R
custom_theme.Rd
diff --git a/reference/cut-variable.html b/reference/cut-variable.html index 296f8311..0d5bc246 100644 --- a/reference/cut-variable.html +++ b/reference/cut-variable.html @@ -38,7 +38,7 @@

Module to Convert Numeric to Factor

- Source: R/cut-variable-ext.R + Source: R/cut-variable-ext.R
cut-variable.Rd
diff --git a/reference/cut_methods.html b/reference/cut_methods.html index 3b2e7ac5..0d1c67ce 100644 --- a/reference/cut_methods.html +++ b/reference/cut_methods.html @@ -38,7 +38,7 @@

Library of cut methods with descriptions

- Source: R/cut-variable-ext.R + Source: R/cut-variable-ext.R
cut_methods.Rd
diff --git a/reference/cut_var.html b/reference/cut_var.html index 715b17cb..d6b8e46b 100644 --- a/reference/cut_var.html +++ b/reference/cut_var.html @@ -42,7 +42,7 @@ Subset first part of string to factor">

Extended cutting function with fall-back to the native base::cut

- Source: R/cut_var.R + Source: R/cut_var.R
cut_var.Rd
diff --git a/reference/data-correlations.html b/reference/data-correlations.html index c8a8f8ea..442d95b5 100644 --- a/reference/data-correlations.html +++ b/reference/data-correlations.html @@ -38,7 +38,7 @@

Data correlations evaluation module

- Source: R/correlations-module.R + Source: R/correlations-module.R
data-correlations.Rd
diff --git a/reference/data-missings.html b/reference/data-missings.html index d29305ea..a29fc614 100644 --- a/reference/data-missings.html +++ b/reference/data-missings.html @@ -38,7 +38,7 @@

Data correlations evaluation module

- Source: R/missings-module.R + Source: R/missings-module.R
data-missings.Rd
diff --git a/reference/data-plots.html b/reference/data-plots.html index cc1e2d30..d712c184 100644 --- a/reference/data-plots.html +++ b/reference/data-plots.html @@ -58,7 +58,7 @@ Beatiful violin plot">

Data correlations evaluation module

- Source: R/data_plots.R, R/plot_bar.R, R/plot_box.R, and 5 more + Source: R/data_plots.R, R/plot_bar.R, R/plot_box.R, and 5 more
data-plots.Rd
@@ -732,7 +732,7 @@ One of c("stack", "dodge", "fill")

#> list() #> #> $plot_env -#> <environment: 0x564345c05938> +#> <environment: 0x564c97f3d148> #> #> $code #> FreesearchR::plot_violin(pri = "mpg", sec = "cyl", ter = NULL) diff --git a/reference/data-plots.md b/reference/data-plots.md index 5832cc46..8a855bc5 100644 --- a/reference/data-plots.md +++ b/reference/data-plots.md @@ -688,7 +688,7 @@ create_plot(mtcars, "plot_violin", "mpg", "cyl") |> attributes() #> list() #> #> $plot_env -#> +#> #> #> $code #> FreesearchR::plot_violin(pri = "mpg", sec = "cyl", ter = NULL) diff --git a/reference/data-summary.html b/reference/data-summary.html index c16830ae..08bf704d 100644 --- a/reference/data-summary.html +++ b/reference/data-summary.html @@ -38,7 +38,7 @@

Data summary module

- Source: R/data-summary.R + Source: R/data-summary.R
data-summary.Rd
diff --git a/reference/data_description.html b/reference/data_description.html index e293a2c3..8cc53a67 100644 --- a/reference/data_description.html +++ b/reference/data_description.html @@ -38,7 +38,7 @@

Ultra short data dascription

- Source: R/helpers.R + Source: R/helpers.R
data_description.Rd
diff --git a/reference/data_summary_gather.html b/reference/data_summary_gather.html index 7df96310..e2d5ebfb 100644 --- a/reference/data_summary_gather.html +++ b/reference/data_summary_gather.html @@ -38,7 +38,7 @@

Data summary for printing visual summary

- Source: R/visual_summary.R + Source: R/visual_summary.R
data_summary_gather.Rd
diff --git a/reference/data_type.html b/reference/data_type.html index 98538175..058e2a64 100644 --- a/reference/data_type.html +++ b/reference/data_type.html @@ -40,7 +40,7 @@ meaningful "clinical" data type.'>

Data type assessment.

- Source: R/helpers.R + Source: R/helpers.R
data_type.Rd
diff --git a/reference/data_type_filter.html b/reference/data_type_filter.html index 29b3817b..de353425 100644 --- a/reference/data_type_filter.html +++ b/reference/data_type_filter.html @@ -38,7 +38,7 @@

Filter function to filter data set by variable type

- Source: R/helpers.R + Source: R/helpers.R
data_type_filter.Rd
diff --git a/reference/data_types.html b/reference/data_types.html index 2ab7ad20..61c74859 100644 --- a/reference/data_types.html +++ b/reference/data_types.html @@ -38,7 +38,7 @@

Recognised data types from data_type

- Source: R/helpers.R + Source: R/helpers.R
data_types.Rd
diff --git a/reference/default_format_arguments.html b/reference/default_format_arguments.html index 14b13118..2a4f2940 100644 --- a/reference/default_format_arguments.html +++ b/reference/default_format_arguments.html @@ -38,7 +38,7 @@

Defaults qmd formats

- Source: R/report.R + Source: R/report.R
default_format_arguments.Rd
diff --git a/reference/default_parsing.html b/reference/default_parsing.html index a7bb2650..8b4180a1 100644 --- a/reference/default_parsing.html +++ b/reference/default_parsing.html @@ -38,7 +38,7 @@

Default data parsing

- Source: R/helpers.R + Source: R/helpers.R
default_parsing.Rd
diff --git a/reference/detect_delimiter.html b/reference/detect_delimiter.html index c5a9290d..1c08e598 100644 --- a/reference/detect_delimiter.html +++ b/reference/detect_delimiter.html @@ -38,7 +38,7 @@

Detect delimiters in string based on allowed delimiters

- Source: R/separate_string.R + Source: R/separate_string.R
detect_delimiter.Rd
diff --git a/reference/dim_change_call.html b/reference/dim_change_call.html index a5c098f8..b4f512a5 100644 --- a/reference/dim_change_call.html +++ b/reference/dim_change_call.html @@ -38,7 +38,7 @@

Dimensions validation

- Source: R/validation.R + Source: R/validation.R
dim_change_call.Rd
diff --git a/reference/drop_empty_event.html b/reference/drop_empty_event.html index d31f0dfa..893cd308 100644 --- a/reference/drop_empty_event.html +++ b/reference/drop_empty_event.html @@ -38,7 +38,7 @@

Drop empty events from REDCap export

- Source: R/redcap_read_shiny_module.R + Source: R/redcap_read_shiny_module.R
drop_empty_event.Rd
diff --git a/reference/expression_string.html b/reference/expression_string.html index 156efbdf..a25a4e59 100644 --- a/reference/expression_string.html +++ b/reference/expression_string.html @@ -38,7 +38,7 @@

Deparses expression as string, substitutes native pipe and adds assign

- Source: R/helpers.R + Source: R/helpers.R
expression_string.Rd
diff --git a/reference/factor_new_levels_labels.html b/reference/factor_new_levels_labels.html index 48128525..8b1aceb3 100644 --- a/reference/factor_new_levels_labels.html +++ b/reference/factor_new_levels_labels.html @@ -38,7 +38,7 @@

Simple function to apply new levels and/or labels to factor

- Source: R/update-factor-ext.R + Source: R/update-factor-ext.R
factor_new_levels_labels.Rd
diff --git a/reference/factorize.html b/reference/factorize.html index 38b67787..0ca3ab24 100644 --- a/reference/factorize.html +++ b/reference/factorize.html @@ -38,7 +38,7 @@

Factorize variables in data.frame

- Source: R/helpers.R + Source: R/helpers.R
factorize.Rd
diff --git a/reference/file_export.html b/reference/file_export.html index 60caadd4..6ca31ca5 100644 --- a/reference/file_export.html +++ b/reference/file_export.html @@ -38,7 +38,7 @@

Title

- Source: R/helpers.R + Source: R/helpers.R
file_export.Rd
diff --git a/reference/format_writer.html b/reference/format_writer.html index 0c500843..d515467a 100644 --- a/reference/format_writer.html +++ b/reference/format_writer.html @@ -38,7 +38,7 @@

Merges list of named arguments for qmd header generation

- Source: R/report.R + Source: R/report.R
format_writer.Rd
diff --git a/reference/get_data_packages.html b/reference/get_data_packages.html index 9b4b93c0..4613dd26 100644 --- a/reference/get_data_packages.html +++ b/reference/get_data_packages.html @@ -38,7 +38,7 @@

Get packages containing datasets

- Source: R/import_globalenv-ext.R + Source: R/import_globalenv-ext.R
get_data_packages.Rd
diff --git a/reference/get_fun_options.html b/reference/get_fun_options.html index 9daf2505..0db91332 100644 --- a/reference/get_fun_options.html +++ b/reference/get_fun_options.html @@ -38,7 +38,7 @@

Get the function options based on the selected function description

- Source: R/regression_model.R + Source: R/regression_model.R
get_fun_options.Rd
diff --git a/reference/get_label.html b/reference/get_label.html index 009b3b64..2fd6d655 100644 --- a/reference/get_label.html +++ b/reference/get_label.html @@ -38,7 +38,7 @@

Print label, and if missing print variable name for plots

- Source: R/data_plots.R + Source: R/data_plots.R
get_label.Rd
diff --git a/reference/get_list_elements.html b/reference/get_list_elements.html index c6bf5c0b..16b71e13 100644 --- a/reference/get_list_elements.html +++ b/reference/get_list_elements.html @@ -38,7 +38,7 @@

Subset elements from list of lists

- Source: R/cut-variable-ext.R + Source: R/cut-variable-ext.R
get_list_elements.Rd
diff --git a/reference/get_plot_options.html b/reference/get_plot_options.html index ef85f71f..ac01d9c1 100644 --- a/reference/get_plot_options.html +++ b/reference/get_plot_options.html @@ -38,7 +38,7 @@

Get the function options based on the selected function description

- Source: R/data_plots.R + Source: R/data_plots.R
get_plot_options.Rd
diff --git a/reference/get_var_icon.html b/reference/get_var_icon.html index 9f14edc3..78296800 100644 --- a/reference/get_var_icon.html +++ b/reference/get_var_icon.html @@ -38,7 +38,7 @@

Easily get variable icon based on data type or class

- Source: R/data-summary.R + Source: R/data-summary.R
get_var_icon.Rd
diff --git a/reference/getfun.html b/reference/getfun.html index df9ced27..a00768de 100644 --- a/reference/getfun.html +++ b/reference/getfun.html @@ -38,7 +38,7 @@

Wrapper function to get function from character vector referring to function from namespace. Passed to 'do.call()'

- Source: R/helpers.R + Source: R/helpers.R
getfun.Rd
@@ -139,7 +139,7 @@ #> z$qr <- NULL #> z #> } -#> <bytecode: 0x5643483de740> +#> <bytecode: 0x564c9805a730> #> <environment: namespace:stats>
diff --git a/reference/getfun.md b/reference/getfun.md index 193542ac..3f8688f6 100644 --- a/reference/getfun.md +++ b/reference/getfun.md @@ -95,6 +95,6 @@ getfun("stats::lm") #> z$qr <- NULL #> z #> } -#> +#> #> ``` diff --git a/reference/gg_theme_export.html b/reference/gg_theme_export.html index 761d4272..2252a08e 100644 --- a/reference/gg_theme_export.html +++ b/reference/gg_theme_export.html @@ -38,7 +38,7 @@

GGplot default theme for plotting export objects

- Source: R/theme.R + Source: R/theme.R
gg_theme_export.Rd
diff --git a/reference/gg_theme_shiny.html b/reference/gg_theme_shiny.html index 08e17f6f..a648fdb5 100644 --- a/reference/gg_theme_shiny.html +++ b/reference/gg_theme_shiny.html @@ -38,7 +38,7 @@

GGplot default theme for plotting in Shiny

- Source: R/theme.R + Source: R/theme.R
gg_theme_shiny.Rd
diff --git a/reference/ggeulerr.html b/reference/ggeulerr.html index 8e425cdb..d799da67 100644 --- a/reference/ggeulerr.html +++ b/reference/ggeulerr.html @@ -42,7 +42,7 @@ but plots it using ggplot2">

Area proportional venn diagrams

- Source: R/plot_euler.R + Source: R/plot_euler.R
ggeulerr.Rd
diff --git a/reference/grepl_fix.html b/reference/grepl_fix.html index 52d9ed84..187f2b4a 100644 --- a/reference/grepl_fix.html +++ b/reference/grepl_fix.html @@ -38,7 +38,7 @@

Matches pattern to vector based on match type

- Source: R/wide2long.R + Source: R/wide2long.R
grepl_fix.Rd
diff --git a/reference/if_not_missing.html b/reference/if_not_missing.html index 4fffa274..ef01078e 100644 --- a/reference/if_not_missing.html +++ b/reference/if_not_missing.html @@ -38,7 +38,7 @@

Return if available

- Source: R/helpers.R + Source: R/helpers.R
if_not_missing.Rd
diff --git a/reference/import-file-type.html b/reference/import-file-type.html index a51cc368..68e6a807 100644 --- a/reference/import-file-type.html +++ b/reference/import-file-type.html @@ -38,7 +38,7 @@

Wrapper to ease data file import

- Source: R/import-file-ext.R + Source: R/import-file-ext.R
import-file-type.Rd
diff --git a/reference/import-file.html b/reference/import-file.html index 8d2391d1..b74f1eb8 100644 --- a/reference/import-file.html +++ b/reference/import-file.html @@ -38,7 +38,7 @@

Import data from a file

- Source: R/import-file-ext.R + Source: R/import-file-ext.R
import-file.Rd
diff --git a/reference/import-file_module.html b/reference/import-file_module.html index 42f4f26b..e8850f0f 100644 --- a/reference/import-file_module.html +++ b/reference/import-file_module.html @@ -38,7 +38,7 @@

Test app for the import_file module

- Source: R/import-file-ext.R + Source: R/import-file-ext.R
import-file_module.Rd
diff --git a/reference/import-globalenv.html b/reference/import-globalenv.html index 5585bd13..725dbb46 100644 --- a/reference/import-globalenv.html +++ b/reference/import-globalenv.html @@ -40,7 +40,7 @@ Modified from datamods">

Import data from an Environment

- Source: R/import_globalenv-ext.R + Source: R/import_globalenv-ext.R
import-globalenv.Rd
diff --git a/reference/index_embed.html b/reference/index_embed.html index c3f407de..449dbf2b 100644 --- a/reference/index_embed.html +++ b/reference/index_embed.html @@ -38,7 +38,7 @@

Split vector by an index and embed addition

- Source: R/report.R + Source: R/report.R
index_embed.Rd
diff --git a/reference/is_any_class.html b/reference/is_any_class.html index 7a508013..b3460ae2 100644 --- a/reference/is_any_class.html +++ b/reference/is_any_class.html @@ -38,7 +38,7 @@

Test class

- Source: R/cut_var.R + Source: R/cut_var.R
is_any_class.Rd
diff --git a/reference/is_consecutive.html b/reference/is_consecutive.html index 2a97f6e0..bb604ac9 100644 --- a/reference/is_consecutive.html +++ b/reference/is_consecutive.html @@ -38,7 +38,7 @@

Checks if elements in vector are equally spaced as indication of ID

- Source: R/data-summary.R + Source: R/data-summary.R
is_consecutive.Rd
diff --git a/reference/is_datetime.html b/reference/is_datetime.html index 29d6924b..43549d02 100644 --- a/reference/is_datetime.html +++ b/reference/is_datetime.html @@ -38,7 +38,7 @@

Test is date/datetime/time

- Source: R/cut_var.R + Source: R/cut_var.R
is_datetime.Rd
diff --git a/reference/is_identical_to_previous.html b/reference/is_identical_to_previous.html index ae236c5d..59828019 100644 --- a/reference/is_identical_to_previous.html +++ b/reference/is_identical_to_previous.html @@ -38,7 +38,7 @@

Test if element is identical to the previous

- Source: R/helpers.R + Source: R/helpers.R
is_identical_to_previous.Rd
diff --git a/reference/is_splittable.html b/reference/is_splittable.html index 8ea0a95b..b7976830 100644 --- a/reference/is_splittable.html +++ b/reference/is_splittable.html @@ -38,7 +38,7 @@

Determine if any variable in data frame character and contains recognized delimiters

- Source: R/separate_string.R + Source: R/separate_string.R
is_splittable.Rd
diff --git a/reference/is_valid_redcap_url.html b/reference/is_valid_redcap_url.html index f011f5f9..69381bfb 100644 --- a/reference/is_valid_redcap_url.html +++ b/reference/is_valid_redcap_url.html @@ -38,7 +38,7 @@

Test if url is valid format for REDCap API

- Source: R/redcap_read_shiny_module.R + Source: R/redcap_read_shiny_module.R
is_valid_redcap_url.Rd
diff --git a/reference/is_valid_token.html b/reference/is_valid_token.html index de5c2887..42387186 100644 --- a/reference/is_valid_token.html +++ b/reference/is_valid_token.html @@ -38,7 +38,7 @@

Validate REDCap token

- Source: R/redcap_read_shiny_module.R + Source: R/redcap_read_shiny_module.R
is_valid_token.Rd
diff --git a/reference/launch_FreesearchR.html b/reference/launch_FreesearchR.html index e86b8068..a3ec93e6 100644 --- a/reference/launch_FreesearchR.html +++ b/reference/launch_FreesearchR.html @@ -38,7 +38,7 @@

Easily launch the FreesearchR app

- Source: R/launch_FreesearchR.R + Source: R/launch_FreesearchR.R
launch_FreesearchR.Rd
diff --git a/reference/limit_data_size.html b/reference/limit_data_size.html index b9e25203..b3a23660 100644 --- a/reference/limit_data_size.html +++ b/reference/limit_data_size.html @@ -42,7 +42,7 @@ The function will limit the data set by dropping rows.">

Limit the allowed data set size by number of cells

- Source: R/import-file-ext.R + Source: R/import-file-ext.R
limit_data_size.Rd
diff --git a/reference/limit_log.html b/reference/limit_log.html index 16ddff05..fa2751bd 100644 --- a/reference/limit_log.html +++ b/reference/limit_log.html @@ -38,7 +38,7 @@

Easily round log scale limits for nice plots

- Source: R/regression_plot.R + Source: R/regression_plot.R
limit_log.Rd
diff --git a/reference/line_break.html b/reference/line_break.html index 4d4e9b16..ff7d6bef 100644 --- a/reference/line_break.html +++ b/reference/line_break.html @@ -38,7 +38,7 @@

Line breaking at given number of characters for nicely plotting labels

- Source: R/data_plots.R + Source: R/data_plots.R
line_break.Rd
diff --git a/reference/list_pkg_data.html b/reference/list_pkg_data.html index 5273150a..784cd2eb 100644 --- a/reference/list_pkg_data.html +++ b/reference/list_pkg_data.html @@ -38,7 +38,7 @@

List dataset contained in a package

- Source: R/import_globalenv-ext.R + Source: R/import_globalenv-ext.R
list_pkg_data.Rd
diff --git a/reference/make_validation.html b/reference/make_validation.html index 3d8526f4..fe0867b3 100644 --- a/reference/make_validation.html +++ b/reference/make_validation.html @@ -38,7 +38,7 @@

Create validation data.frame

- Source: R/validation.R + Source: R/validation.R
make_validation.Rd
diff --git a/reference/make_validation_alerts.html b/reference/make_validation_alerts.html index 140fdcae..8dbd3fe9 100644 --- a/reference/make_validation_alerts.html +++ b/reference/make_validation_alerts.html @@ -38,7 +38,7 @@

Create alert from validation data.frame

- Source: R/validation.R + Source: R/validation.R
make_validation_alerts.Rd
diff --git a/reference/mcar_validate.html b/reference/mcar_validate.html index 3dfb50c9..6492dd2e 100644 --- a/reference/mcar_validate.html +++ b/reference/mcar_validate.html @@ -38,7 +38,7 @@

MCAR validation based on a gtsummary table bady

- Source: R/validation.R + Source: R/validation.R
mcar_validate.Rd
diff --git a/reference/merge_expression.html b/reference/merge_expression.html index 98bb13c7..70fca6ed 100644 --- a/reference/merge_expression.html +++ b/reference/merge_expression.html @@ -38,7 +38,7 @@

Merge list of expressions

- Source: R/helpers.R + Source: R/helpers.R
merge_expression.Rd
diff --git a/reference/merge_long.html b/reference/merge_long.html index da1c5cfb..b90bdbe5 100644 --- a/reference/merge_long.html +++ b/reference/merge_long.html @@ -38,7 +38,7 @@

Wrapper to pivot gtsummary table data to long for plotting

- Source: R/regression_plot.R + Source: R/regression_plot.R
merge_long.Rd
diff --git a/reference/missing_fraction.html b/reference/missing_fraction.html index 63ac5b72..3ba3f3a7 100644 --- a/reference/missing_fraction.html +++ b/reference/missing_fraction.html @@ -38,7 +38,7 @@

Get missingsness fraction

- Source: R/helpers.R + Source: R/helpers.R
missing_fraction.Rd
diff --git a/reference/missings_logic_across.html b/reference/missings_logic_across.html index fe7a47b4..d6084e6c 100644 --- a/reference/missings_logic_across.html +++ b/reference/missings_logic_across.html @@ -38,7 +38,7 @@

Converting all variables to logicals by missing status

- Source: R/missings-module.R + Source: R/missings-module.R
missings_logic_across.Rd
diff --git a/reference/missings_validate.html b/reference/missings_validate.html index ce9b6645..7704bb17 100644 --- a/reference/missings_validate.html +++ b/reference/missings_validate.html @@ -38,7 +38,7 @@

Validate function of missingness in data

- Source: R/validation.R + Source: R/validation.R
missings_validate.Rd
diff --git a/reference/modify_qmd.html b/reference/modify_qmd.html index ad459e0a..7c224218 100644 --- a/reference/modify_qmd.html +++ b/reference/modify_qmd.html @@ -38,7 +38,7 @@

Wrapper to modify quarto file to render specific formats

- Source: R/report.R + Source: R/report.R
modify_qmd.Rd
diff --git a/reference/names2val.html b/reference/names2val.html index 32771545..d2748031 100644 --- a/reference/names2val.html +++ b/reference/names2val.html @@ -38,7 +38,7 @@

Set values as names and names as values

- Source: R/cut-variable-ext.R + Source: R/cut-variable-ext.R
names2val.Rd
diff --git a/reference/obs_filter_validate.html b/reference/obs_filter_validate.html index 5e5304e9..1b28af05 100644 --- a/reference/obs_filter_validate.html +++ b/reference/obs_filter_validate.html @@ -38,7 +38,7 @@

Observations filter test wrapper

- Source: R/validation.R + Source: R/validation.R
obs_filter_validate.Rd
diff --git a/reference/overview_vars.html b/reference/overview_vars.html index 74f1d37d..e3ea54bd 100644 --- a/reference/overview_vars.html +++ b/reference/overview_vars.html @@ -38,7 +38,7 @@

Create a data overview data.frame ready for sparklines

- Source: R/data-summary.R + Source: R/data-summary.R
overview_vars.Rd
diff --git a/reference/pipe_string.html b/reference/pipe_string.html index 041c8969..78d840e8 100644 --- a/reference/pipe_string.html +++ b/reference/pipe_string.html @@ -38,7 +38,7 @@

Reduce character vector with the native pipe operator or character string

- Source: R/helpers.R + Source: R/helpers.R
pipe_string.Rd
diff --git a/reference/plot.tbl_regression.html b/reference/plot.tbl_regression.html index 48936703..40aed5c3 100644 --- a/reference/plot.tbl_regression.html +++ b/reference/plot.tbl_regression.html @@ -38,7 +38,7 @@

Regression coef plot from gtsummary. Slightly modified to pass on arguments

- Source: R/regression_plot.R + Source: R/regression_plot.R
plot.tbl_regression.Rd
diff --git a/reference/plot_euler.html b/reference/plot_euler.html index 165c4ecc..79cbe931 100644 --- a/reference/plot_euler.html +++ b/reference/plot_euler.html @@ -38,7 +38,7 @@

Easily plot euler diagrams

- Source: R/plot_euler.R + Source: R/plot_euler.R
plot_euler.Rd
diff --git a/reference/plot_euler_single.html b/reference/plot_euler_single.html index 6b932655..8d58bb46 100644 --- a/reference/plot_euler_single.html +++ b/reference/plot_euler_single.html @@ -38,7 +38,7 @@

Easily plot single euler diagrams

- Source: R/plot_euler.R + Source: R/plot_euler.R
plot_euler_single.Rd
diff --git a/reference/plot_sankey_single.html b/reference/plot_sankey_single.html index 01153a71..5e392b7a 100644 --- a/reference/plot_sankey_single.html +++ b/reference/plot_sankey_single.html @@ -38,7 +38,7 @@

Beautiful sankey plot

- Source: R/plot_sankey.R + Source: R/plot_sankey.R
plot_sankey_single.Rd
diff --git a/reference/possible_functions.html b/reference/possible_functions.html index 26336de2..ef69a02c 100644 --- a/reference/possible_functions.html +++ b/reference/possible_functions.html @@ -38,7 +38,7 @@

Get possible regression models

- Source: R/regression_model.R + Source: R/regression_model.R
possible_functions.Rd
diff --git a/reference/possible_plots.html b/reference/possible_plots.html index ca3f295f..db50f41e 100644 --- a/reference/possible_plots.html +++ b/reference/possible_plots.html @@ -38,7 +38,7 @@

Get possible regression models

- Source: R/data_plots.R + Source: R/data_plots.R
possible_plots.Rd
diff --git a/reference/read_input.html b/reference/read_input.html index f8824040..1f0813a4 100644 --- a/reference/read_input.html +++ b/reference/read_input.html @@ -38,7 +38,7 @@

Flexible file import based on extension

- Source: R/helpers.R + Source: R/helpers.R
read_input.Rd
diff --git a/reference/redcap_read_shiny_module.html b/reference/redcap_read_shiny_module.html index 1c734be8..07ea1a72 100644 --- a/reference/redcap_read_shiny_module.html +++ b/reference/redcap_read_shiny_module.html @@ -40,7 +40,7 @@ Test app for the redcap_read_shiny_module">

Shiny module to browser and export REDCap data

- Source: R/redcap_read_shiny_module.R + Source: R/redcap_read_shiny_module.R
redcap_read_shiny_module.Rd
diff --git a/reference/regression_model.html b/reference/regression_model.html index 82053726..0401671b 100644 --- a/reference/regression_model.html +++ b/reference/regression_model.html @@ -38,7 +38,7 @@

Create a regression model programatically

- Source: R/regression_model.R + Source: R/regression_model.R
regression_model.Rd
diff --git a/reference/regression_table.html b/reference/regression_table.html index 79eae4da..08a39920 100644 --- a/reference/regression_table.html +++ b/reference/regression_table.html @@ -38,7 +38,7 @@

Create table of regression model

- Source: R/regression_table.R + Source: R/regression_table.R
regression_table.Rd
diff --git a/reference/regression_table_create.html b/reference/regression_table_create.html index 29263dbd..b5f6feb7 100644 --- a/reference/regression_table_create.html +++ b/reference/regression_table_create.html @@ -38,7 +38,7 @@

Create regression summary table

- Source: R/regression_table.R + Source: R/regression_table.R
regression_table_create.Rd
diff --git a/reference/remove_empty_attr.html b/reference/remove_empty_attr.html index 9c00a5f2..6231d0c7 100644 --- a/reference/remove_empty_attr.html +++ b/reference/remove_empty_attr.html @@ -38,7 +38,7 @@

Remove empty/NA attributes

- Source: R/helpers.R + Source: R/helpers.R
remove_empty_attr.Rd
diff --git a/reference/remove_empty_cols.html b/reference/remove_empty_cols.html index 8e81fc1e..fd085c30 100644 --- a/reference/remove_empty_cols.html +++ b/reference/remove_empty_cols.html @@ -38,7 +38,7 @@

Removes columns with completenes below cutoff

- Source: R/helpers.R + Source: R/helpers.R
remove_empty_cols.Rd
diff --git a/reference/remove_nested_list.html b/reference/remove_nested_list.html index 77285b23..8f442bb8 100644 --- a/reference/remove_nested_list.html +++ b/reference/remove_nested_list.html @@ -38,7 +38,7 @@

Very simple function to remove nested lists, like when uploading .rds

- Source: R/helpers.R + Source: R/helpers.R
remove_nested_list.Rd
diff --git a/reference/repeated_instruments.html b/reference/repeated_instruments.html index aba39b6e..93cb7f34 100644 --- a/reference/repeated_instruments.html +++ b/reference/repeated_instruments.html @@ -38,7 +38,7 @@

Get names of repeated instruments

- Source: R/redcap_read_shiny_module.R + Source: R/redcap_read_shiny_module.R
repeated_instruments.Rd
diff --git a/reference/selectInputIcon.html b/reference/selectInputIcon.html index 06771a2b..eb6edfa3 100644 --- a/reference/selectInputIcon.html +++ b/reference/selectInputIcon.html @@ -40,7 +40,7 @@ after, or on both sides of a classic selectInput.">

Create a select input control with icon(s)

- Source: R/import-file-ext.R + Source: R/import-file-ext.R
selectInputIcon.Rd
diff --git a/reference/separate_string.html b/reference/separate_string.html index c1a154d0..5fdaac94 100644 --- a/reference/separate_string.html +++ b/reference/separate_string.html @@ -38,7 +38,7 @@

Separate string wide or long

- Source: R/separate_string.R + Source: R/separate_string.R
separate_string.Rd
diff --git a/reference/set_column_label.html b/reference/set_column_label.html index 788c63c9..509acb9d 100644 --- a/reference/set_column_label.html +++ b/reference/set_column_label.html @@ -38,7 +38,7 @@

(Re)label columns in data.frame

- Source: R/helpers.R + Source: R/helpers.R
set_column_label.Rd
diff --git a/reference/show_data.html b/reference/show_data.html index a7fa16c1..bf0e0dae 100644 --- a/reference/show_data.html +++ b/reference/show_data.html @@ -38,7 +38,7 @@

Display a table in a window

- Source: R/datagrid-infos-mod.R + Source: R/datagrid-infos-mod.R
show_data.Rd
diff --git a/reference/simple_snake.html b/reference/simple_snake.html index a35c840d..e1441b8e 100644 --- a/reference/simple_snake.html +++ b/reference/simple_snake.html @@ -38,7 +38,7 @@

Simplified version of the snakecase packages to_snake_case

- Source: R/helpers.R + Source: R/helpers.R
simple_snake.Rd
diff --git a/reference/sort_by.html b/reference/sort_by.html index 270c74cf..cc382a29 100644 --- a/reference/sort_by.html +++ b/reference/sort_by.html @@ -38,7 +38,7 @@

Drop-in replacement for the base::sort_by with option to remove NAs

- Source: R/helpers.R + Source: R/helpers.R
sort_by.Rd
diff --git a/reference/specify_qmd_format.html b/reference/specify_qmd_format.html index 394bd59c..4c181f06 100644 --- a/reference/specify_qmd_format.html +++ b/reference/specify_qmd_format.html @@ -38,7 +38,7 @@

Specify format arguments to include in qmd header/frontmatter

- Source: R/report.R + Source: R/report.R
specify_qmd_format.Rd
diff --git a/reference/split-string.html b/reference/split-string.html index 070c0bdb..c920f321 100644 --- a/reference/split-string.html +++ b/reference/split-string.html @@ -38,7 +38,7 @@

String split module based on tidyr::separate_

- Source: R/separate_string.R + Source: R/separate_string.R
split-string.Rd
diff --git a/reference/subset_types.html b/reference/subset_types.html index 9b24dd08..47966764 100644 --- a/reference/subset_types.html +++ b/reference/subset_types.html @@ -38,7 +38,7 @@

Easily subset by data type function

- Source: R/data_plots.R + Source: R/data_plots.R
subset_types.Rd
diff --git a/reference/supported_functions.html b/reference/supported_functions.html index 4d09745c..f5fcfe8b 100644 --- a/reference/supported_functions.html +++ b/reference/supported_functions.html @@ -40,7 +40,7 @@ unique for each element on list.'>

Implemented functions

- Source: R/regression_model.R + Source: R/regression_model.R
supported_functions.Rd
diff --git a/reference/supported_plots.html b/reference/supported_plots.html index fbf754a2..4afba93a 100644 --- a/reference/supported_plots.html +++ b/reference/supported_plots.html @@ -54,7 +54,7 @@ tertiary.type: Tertiary variable data type (continuous, dichotomous or ordinal)

Implemented functions

- Source: R/data_plots.R + Source: R/data_plots.R
supported_plots.Rd
diff --git a/reference/symmetrical_scale_x_log10.html b/reference/symmetrical_scale_x_log10.html index b345921c..bb913fe4 100644 --- a/reference/symmetrical_scale_x_log10.html +++ b/reference/symmetrical_scale_x_log10.html @@ -38,7 +38,7 @@

Ensure symmetrical plot around 1 on a logarithmic x scale for ratio plots

- Source: R/regression_plot.R + Source: R/regression_plot.R
symmetrical_scale_x_log10.Rd
diff --git a/reference/tbl_merge.html b/reference/tbl_merge.html index 39833a56..9f767e58 100644 --- a/reference/tbl_merge.html +++ b/reference/tbl_merge.html @@ -40,7 +40,7 @@ spanner names.">

A substitue to gtsummary::tbl_merge, that will use list names for the tab spanner names.

- Source: R/regression_table.R + Source: R/regression_table.R
tbl_merge.Rd
diff --git a/reference/type_icons.html b/reference/type_icons.html index 6e01a820..bfa87c2c 100644 --- a/reference/type_icons.html +++ b/reference/type_icons.html @@ -38,7 +38,7 @@

Get data type icons

- Source: R/data-summary.R + Source: R/data-summary.R
type_icons.Rd
diff --git a/reference/ui_elements.html b/reference/ui_elements.html index 07e17463..5f9427fa 100644 --- a/reference/ui_elements.html +++ b/reference/ui_elements.html @@ -38,7 +38,7 @@

FreesearchR UI elements list

- Source: R/ui_elements.R + Source: R/ui_elements.R
ui_elements.Rd
diff --git a/reference/unique_names.html b/reference/unique_names.html index 17de6472..54d96847 100644 --- a/reference/unique_names.html +++ b/reference/unique_names.html @@ -42,7 +42,7 @@ If a variable name already exists, a number will be appended.">

Make unique variable names

- Source: R/update-factor-ext.R + Source: R/update-factor-ext.R
unique_names.Rd
diff --git a/reference/unique_short.html b/reference/unique_short.html index 6d09b045..1b392998 100644 --- a/reference/unique_short.html +++ b/reference/unique_short.html @@ -40,7 +40,7 @@ strings.">

Create unique short names of character vector items based on index

- Source: R/visual_summary.R + Source: R/visual_summary.R
unique_short.Rd
diff --git a/reference/update-factor.html b/reference/update-factor.html index 8999d8b6..8c863f14 100644 --- a/reference/update-factor.html +++ b/reference/update-factor.html @@ -38,7 +38,7 @@

Module to Reorder the Levels of a Factor Variable

- Source: R/update-factor-ext.R + Source: R/update-factor-ext.R
update-factor.Rd
diff --git a/reference/update-variables.html b/reference/update-variables.html index 83503665..2c6280c2 100644 --- a/reference/update-variables.html +++ b/reference/update-variables.html @@ -38,7 +38,7 @@

Select, rename and convert variables

- Source: R/update-variables-ext.R + Source: R/update-variables-ext.R
update-variables.Rd
diff --git a/reference/update_variables_datagrid.html b/reference/update_variables_datagrid.html index 23fb7059..5ea1854e 100644 --- a/reference/update_variables_datagrid.html +++ b/reference/update_variables_datagrid.html @@ -38,7 +38,7 @@

Modified from the datamods pacakge

- Source: R/update-variables-ext.R + Source: R/update-variables-ext.R
update_variables_datagrid.Rd
diff --git a/reference/validation.html b/reference/validation.html index 7ce268f6..1b56d1e6 100644 --- a/reference/validation.html +++ b/reference/validation.html @@ -38,7 +38,7 @@

Validation module

- Source: R/validation.R + Source: R/validation.R
validation.Rd
diff --git a/reference/validation_lib.html b/reference/validation_lib.html index b614023b..20963438 100644 --- a/reference/validation_lib.html +++ b/reference/validation_lib.html @@ -38,7 +38,7 @@

Validation library

- Source: R/validation.R + Source: R/validation.R
validation_lib.Rd
diff --git a/reference/vars_filter_validate.html b/reference/vars_filter_validate.html index ca98b5d0..a9079770 100644 --- a/reference/vars_filter_validate.html +++ b/reference/vars_filter_validate.html @@ -38,7 +38,7 @@

Variable filter test wrapper

- Source: R/validation.R + Source: R/validation.R
vars_filter_validate.Rd
diff --git a/reference/vectorSelectInput.html b/reference/vectorSelectInput.html index e5b4e4f9..59bc7043 100644 --- a/reference/vectorSelectInput.html +++ b/reference/vectorSelectInput.html @@ -38,7 +38,7 @@

A selectizeInput customized for named vectors

- Source: R/custom_SelectInput.R + Source: R/custom_SelectInput.R
vectorSelectInput.Rd
diff --git a/reference/vertical_stacked_bars.html b/reference/vertical_stacked_bars.html index c6e36f8c..2e70b8a1 100644 --- a/reference/vertical_stacked_bars.html +++ b/reference/vertical_stacked_bars.html @@ -38,7 +38,7 @@

Vertical stacked bar plot wrapper

- Source: R/plot_hbar.R + Source: R/plot_hbar.R
vertical_stacked_bars.Rd
diff --git a/reference/visual-summary.html b/reference/visual-summary.html index 5cf5fd6d..b2b8fd80 100644 --- a/reference/visual-summary.html +++ b/reference/visual-summary.html @@ -46,7 +46,7 @@ Ggplot2 data summary visualisation based on visdat::vis_dat.">

Data correlations evaluation module

- Source: R/visual_summary.R + Source: R/visual_summary.R
visual-summary.Rd
diff --git a/reference/wide2long.html b/reference/wide2long.html index b441ca78..3e582290 100644 --- a/reference/wide2long.html +++ b/reference/wide2long.html @@ -42,7 +42,7 @@ an added "ignore" string pattern or similarly. Example 2.'>

Alternative pivoting method for easily pivoting based on name pattern

- Source: R/wide2long.R + Source: R/wide2long.R
wide2long.Rd
diff --git a/reference/wrap_plot_list.html b/reference/wrap_plot_list.html index 8e169109..27916b95 100644 --- a/reference/wrap_plot_list.html +++ b/reference/wrap_plot_list.html @@ -38,7 +38,7 @@

Wrapping

- Source: R/data_plots.R + Source: R/data_plots.R
wrap_plot_list.Rd
diff --git a/reference/write_quarto.html b/reference/write_quarto.html index 55d19df8..c1d43205 100644 --- a/reference/write_quarto.html +++ b/reference/write_quarto.html @@ -38,7 +38,7 @@

Wrapper to save data in RDS, load into specified qmd and render

- Source: R/helpers.R + Source: R/helpers.R
write_quarto.Rd
diff --git a/search.json b/search.json index dc1fcbf7..4f201309 100644 --- a/search.json +++ b/search.json @@ -1 +1 @@ -[{"path":[]},{"path":"https://agdamsbo.github.io/FreesearchR/CODE_OF_CONDUCT.html","id":"our-pledge","dir":"","previous_headings":"","what":"Our Pledge","title":"Contributor Covenant Code of Conduct","text":"members, contributors, leaders pledge make participation community harassment-free experience everyone, regardless age, body size, visible invisible disability, ethnicity, sex characteristics, gender identity expression, level experience, education, socio-economic status, nationality, personal appearance, race, caste, color, religion, sexual identity orientation. pledge act interact ways contribute open, welcoming, diverse, inclusive, healthy community.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/CODE_OF_CONDUCT.html","id":"our-standards","dir":"","previous_headings":"","what":"Our Standards","title":"Contributor Covenant Code of Conduct","text":"Examples behavior contributes positive environment community include: Demonstrating empathy kindness toward people respectful differing opinions, viewpoints, experiences Giving gracefully accepting constructive feedback Accepting responsibility apologizing affected mistakes, learning experience Focusing best just us individuals, overall community Examples unacceptable behavior include: use sexualized language imagery, sexual attention advances kind Trolling, insulting derogatory comments, personal political attacks Public private harassment Publishing others’ private information, physical email address, without explicit permission conduct reasonably considered inappropriate professional setting","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/CODE_OF_CONDUCT.html","id":"enforcement-responsibilities","dir":"","previous_headings":"","what":"Enforcement Responsibilities","title":"Contributor Covenant Code of Conduct","text":"Community leaders responsible clarifying enforcing standards acceptable behavior take appropriate fair corrective action response behavior deem inappropriate, threatening, offensive, harmful. 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Definitions.","title":"GNU Affero General Public License","text":"“License” refers version 3 GNU Affero General Public License. “Copyright” also means copyright-like laws apply kinds works, semiconductor masks. “Program” refers copyrightable work licensed License. licensee addressed “”. “Licensees” “recipients” may individuals organizations. “modify” work means copy adapt part work fashion requiring copyright permission, making exact copy. resulting work called “modified version” earlier work work “based ” earlier work. “covered work” means either unmodified Program work based Program. “propagate” work means anything , without permission, make directly secondarily liable infringement applicable copyright law, except executing computer modifying private copy. Propagation includes copying, distribution (without modification), making available public, countries activities well. “convey” work means kind propagation enables parties make receive copies. 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However, include work’s System Libraries, general-purpose tools generally available free programs used unmodified performing activities part work. example, Corresponding Source includes interface definition files associated source files work, source code shared libraries dynamically linked subprograms work specifically designed require, intimate data communication control flow subprograms parts work. Corresponding Source need include anything users can regenerate automatically parts Corresponding Source. Corresponding Source work source code form work.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/LICENSE.html","id":"id_2-basic-permissions","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"2. Basic Permissions.","title":"GNU Affero General Public License","text":"rights granted License granted term copyright Program, irrevocable provided stated conditions met. License explicitly affirms unlimited permission run unmodified Program. output running covered work covered License output, given content, constitutes covered work. License acknowledges rights fair use equivalent, provided copyright law. may make, run propagate covered works convey, without conditions long license otherwise remains force. may convey covered works others sole purpose make modifications exclusively , provide facilities running works, provided comply terms License conveying material control copyright. thus making running covered works must exclusively behalf, direction control, terms prohibit making copies copyrighted material outside relationship . Conveying circumstances permitted solely conditions stated . Sublicensing allowed; section 10 makes unnecessary.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/LICENSE.html","id":"id_3-protecting-users-legal-rights-from-anti-circumvention-law","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"3. Protecting Users’ Legal Rights From Anti-Circumvention Law.","title":"GNU Affero General Public License","text":"covered work shall deemed part effective technological measure applicable law fulfilling obligations article 11 WIPO copyright treaty adopted 20 December 1996, similar laws prohibiting restricting circumvention measures. convey covered work, waive legal power forbid circumvention technological measures extent circumvention effected exercising rights License respect covered work, disclaim intention limit operation modification work means enforcing, work’s users, third parties’ legal rights forbid circumvention technological measures.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/LICENSE.html","id":"id_4-conveying-verbatim-copies","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"4. Conveying Verbatim Copies.","title":"GNU Affero General Public License","text":"may convey verbatim copies Program’s source code receive , medium, provided conspicuously appropriately publish copy appropriate copyright notice; keep intact notices stating License non-permissive terms added accord section 7 apply code; keep intact notices absence warranty; give recipients copy License along Program. may charge price price copy convey, may offer support warranty protection fee.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/LICENSE.html","id":"id_5-conveying-modified-source-versions","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"5. 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Convey object code using peer--peer transmission, provided inform peers object code Corresponding Source work offered general public charge subsection 6d. separable portion object code, whose source code excluded Corresponding Source System Library, need included conveying object code work. “User Product” either (1) “consumer product”, means tangible personal property normally used personal, family, household purposes, (2) anything designed sold incorporation dwelling. determining whether product consumer product, doubtful cases shall resolved favor coverage. particular product received particular user, “normally used” refers typical common use class product, regardless status particular user way particular user actually uses, expects expected use, product. product consumer product regardless whether product substantial commercial, industrial non-consumer uses, unless uses represent significant mode use product. “Installation Information” User Product means methods, procedures, authorization keys, information required install execute modified versions covered work User Product modified version Corresponding Source. information must suffice ensure continued functioning modified object code case prevented interfered solely modification made. convey object code work section , , specifically use , User Product, conveying occurs part transaction right possession use User Product transferred recipient perpetuity fixed term (regardless transaction characterized), Corresponding Source conveyed section must accompanied Installation Information. requirement apply neither third party retains ability install modified object code User Product (example, work installed ROM). requirement provide Installation Information include requirement continue provide support service, warranty, updates work modified installed recipient, User Product modified installed. 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Additional permissions applicable entire Program shall treated though included License, extent valid applicable law. additional permissions apply part Program, part may used separately permissions, entire Program remains governed License without regard additional permissions. convey copy covered work, may option remove additional permissions copy, part . (Additional permissions may written require removal certain cases modify work.) may place additional permissions material, added covered work, can give appropriate copyright permission. Notwithstanding provision License, material add covered work, may (authorized copyright holders material) supplement terms License terms: Disclaiming warranty limiting liability differently terms sections 15 16 License; Requiring preservation specified reasonable legal notices author attributions material Appropriate Legal Notices displayed works containing ; Prohibiting misrepresentation origin material, requiring modified versions material marked reasonable ways different original version; Limiting use publicity purposes names licensors authors material; Declining grant rights trademark law use trade names, trademarks, service marks; Requiring indemnification licensors authors material anyone conveys material (modified versions ) contractual assumptions liability recipient, liability contractual assumptions directly impose licensors authors. non-permissive additional terms considered “restrictions” within meaning section 10. Program received , part , contains notice stating governed License along term restriction, may remove term. license document contains restriction permits relicensing conveying License, may add covered work material governed terms license document, provided restriction survive relicensing conveying. add terms covered work accord section, must place, relevant source files, statement additional terms apply files, notice indicating find applicable terms. Additional terms, permissive non-permissive, may stated form separately written license, stated exceptions; requirements apply either way.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/LICENSE.html","id":"id_8-termination","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"8. Termination.","title":"GNU Affero General Public License","text":"may propagate modify covered work except expressly provided License. attempt otherwise propagate modify void, automatically terminate rights License (including patent licenses granted third paragraph section 11). However, cease violation License, license particular copyright holder reinstated () provisionally, unless copyright holder explicitly finally terminates license, (b) permanently, copyright holder fails notify violation reasonable means prior 60 days cessation. Moreover, license particular copyright holder reinstated permanently copyright holder notifies violation reasonable means, first time received notice violation License (work) copyright holder, cure violation prior 30 days receipt notice. Termination rights section terminate licenses parties received copies rights License. rights terminated permanently reinstated, qualify receive new licenses material section 10.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/LICENSE.html","id":"id_9-acceptance-not-required-for-having-copies","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"9. Acceptance Not Required for Having Copies.","title":"GNU Affero General Public License","text":"required accept License order receive run copy Program. Ancillary propagation covered work occurring solely consequence using peer--peer transmission receive copy likewise require acceptance. However, nothing License grants permission propagate modify covered work. actions infringe copyright accept License. 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Patents.","title":"GNU Affero General Public License","text":"“contributor” copyright holder authorizes use License Program work Program based. work thus licensed called contributor’s “contributor version”. contributor’s “essential patent claims” patent claims owned controlled contributor, whether already acquired hereafter acquired, infringed manner, permitted License, making, using, selling contributor version, include claims infringed consequence modification contributor version. purposes definition, “control” includes right grant patent sublicenses manner consistent requirements License. contributor grants non-exclusive, worldwide, royalty-free patent license contributor’s essential patent claims, make, use, sell, offer sale, import otherwise run, modify propagate contents contributor version. following three paragraphs, “patent license” express agreement commitment, however denominated, enforce patent (express permission practice patent covenant sue patent infringement). “grant” patent license party means make agreement commitment enforce patent party. convey covered work, knowingly relying patent license, Corresponding Source work available anyone copy, free charge terms License, publicly available network server readily accessible means, must either (1) cause Corresponding Source available, (2) arrange deprive benefit patent license particular work, (3) arrange, manner consistent requirements License, extend patent license downstream recipients. “Knowingly relying” means actual knowledge , patent license, conveying covered work country, recipient’s use covered work country, infringe one identifiable patents country reason believe valid. , pursuant connection single transaction arrangement, convey, propagate procuring conveyance , covered work, grant patent license parties receiving covered work authorizing use, propagate, modify convey specific copy covered work, patent license grant automatically extended recipients covered work works based . patent license “discriminatory” include within scope coverage, prohibits exercise , conditioned non-exercise one rights specifically granted License. may convey covered work party arrangement third party business distributing software, make payment third party based extent activity conveying work, third party grants, parties receive covered work , discriminatory patent license () connection copies covered work conveyed (copies made copies), (b) primarily connection specific products compilations contain covered work, unless entered arrangement, patent license granted, prior 28 March 2007. 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Remote Network Interaction; Use with the GNU General Public License.","title":"GNU Affero General Public License","text":"Notwithstanding provision License, modify Program, modified version must prominently offer users interacting remotely computer network (version supports interaction) opportunity receive Corresponding Source version providing access Corresponding Source network server charge, standard customary means facilitating copying software. Corresponding Source shall include Corresponding Source work covered version 3 GNU General Public License incorporated pursuant following paragraph. Notwithstanding provision License, permission link combine covered work work licensed version 3 GNU General Public License single combined work, convey resulting work. terms License continue apply part covered work, work combined remain governed version 3 GNU General Public License.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/LICENSE.html","id":"id_14-revised-versions-of-this-license","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"14. Revised Versions of this License.","title":"GNU Affero General Public License","text":"Free Software Foundation may publish revised /new versions GNU Affero General Public License time time. new versions similar spirit present version, may differ detail address new problems concerns. version given distinguishing version number. Program specifies certain numbered version GNU Affero General Public License “later version” applies , option following terms conditions either numbered version later version published Free Software Foundation. Program specify version number GNU Affero General Public License, may choose version ever published Free Software Foundation. Program specifies proxy can decide future versions GNU Affero General Public License can used, proxy’s public statement acceptance version permanently authorizes choose version Program. Later license versions may give additional different permissions. However, additional obligations imposed author copyright holder result choosing follow later version.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/LICENSE.html","id":"id_15-disclaimer-of-warranty","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"15. Disclaimer of Warranty.","title":"GNU Affero General Public License","text":"WARRANTY PROGRAM, EXTENT PERMITTED APPLICABLE LAW. EXCEPT OTHERWISE STATED WRITING COPYRIGHT HOLDERS /PARTIES PROVIDE PROGRAM “” WITHOUT WARRANTY KIND, EITHER EXPRESSED IMPLIED, INCLUDING, LIMITED , IMPLIED WARRANTIES MERCHANTABILITY FITNESS PARTICULAR PURPOSE. ENTIRE RISK QUALITY PERFORMANCE PROGRAM . PROGRAM PROVE DEFECTIVE, ASSUME COST NECESSARY SERVICING, REPAIR CORRECTION.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/LICENSE.html","id":"id_16-limitation-of-liability","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"16. Limitation of Liability.","title":"GNU Affero General Public License","text":"EVENT UNLESS REQUIRED APPLICABLE LAW AGREED WRITING COPYRIGHT HOLDER, PARTY MODIFIES /CONVEYS PROGRAM PERMITTED , LIABLE DAMAGES, INCLUDING GENERAL, SPECIAL, INCIDENTAL CONSEQUENTIAL DAMAGES ARISING USE INABILITY USE PROGRAM (INCLUDING LIMITED LOSS DATA DATA RENDERED INACCURATE LOSSES SUSTAINED THIRD PARTIES FAILURE PROGRAM OPERATE PROGRAMS), EVEN HOLDER PARTY ADVISED POSSIBILITY DAMAGES.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/LICENSE.html","id":"id_17-interpretation-of-sections-15-and-16","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"17. Interpretation of Sections 15 and 16.","title":"GNU Affero General Public License","text":"disclaimer warranty limitation liability provided given local legal effect according terms, reviewing courts shall apply local law closely approximates absolute waiver civil liability connection Program, unless warranty assumption liability accompanies copy Program return fee. END TERMS CONDITIONS","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/LICENSE.html","id":"how-to-apply-these-terms-to-your-new-programs","dir":"","previous_headings":"","what":"How to Apply These Terms to Your New Programs","title":"GNU Affero General Public License","text":"develop new program, want greatest possible use public, best way achieve make free software everyone can redistribute change terms. , attach following notices program. safest attach start source file effectively state exclusion warranty; file least “copyright” line pointer full notice found. Also add information contact electronic paper mail. software can interact users remotely computer network, also make sure provides way users get source. example, program web application, interface display “Source” link leads users archive code. many ways offer source, different solutions better different programs; see section 13 specific requirements. also get employer (work programmer) school, , sign “copyright disclaimer” program, necessary. information , apply follow GNU AGPL, see https://www.gnu.org/licenses/.","code":" Copyright (C) This program is free software: you can redistribute it and/or modify it under the terms of the GNU Affero General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Affero General Public License for more details. You should have received a copy of the GNU Affero General Public License along with this program. If not, see ."},{"path":"https://agdamsbo.github.io/FreesearchR/QA.html","id":null,"dir":"","previous_headings":"","what":"Questions and answers","title":"Questions and answers","text":"complete instructions set also available, collection questions answers project use FreesearchR app.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/QA.html","id":"are-you-keeping-the-uploaded-data","dir":"","previous_headings":"","what":"Are you keeping the uploaded data?","title":"Questions and answers","text":"! uploaded data deleted session ends, stored analyses immediately deleted.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/QA.html","id":"how-do-i-merge-multiple-datasets","dir":"","previous_headings":"","what":"How do I merge multiple datasets?","title":"Questions and answers","text":"can merge multiple sheets ods xls(x) files import common key variable present selected sheets. Multiple file upload/merge currently supported.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/ROADMAP.html","id":null,"dir":"","previous_headings":"","what":"Project roadmap","title":"Project roadmap","text":"current state app considered experimental, however, version 25.4.2, FreesearchR app considered functional can used data evaluation analyses. (actual list quite long growing) planned new features improvements:","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/ROADMAP.html","id":"implementation-in-real-world-clinical-studies-and-projects","dir":"","previous_headings":"","what":"Implementation in real world clinical studies and projects","title":"Project roadmap","text":"really main goal whole project.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/ROADMAP.html","id":"new-features","dir":"","previous_headings":"","what":"New features:","title":"Project roadmap","text":"Merge data multiple sources (can merge sheets workbook (xls ods), allow merging several files /REDcap data) Additional plot types (bar plots, others…) Missingness analysis panel","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/ROADMAP.html","id":"expanded-options-for-regression-models","dir":"","previous_headings":"","what":"Expanded options for regression models:","title":"Project roadmap","text":"Expansion regression analysis functionality put hold now focus basic use-cases): study designs Cross-sectional data analyses Longitudinal data analyses Survival analysis regression models Stratified analyses Mixed models repeated measures Cox regression analyses Data handling Transforming data (transpose pivoting)","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/ROADMAP.html","id":"improved-documentation","dir":"","previous_headings":"","what":"Improved documentation:","title":"Project roadmap","text":"Video walk-central functions","code":""},{"path":[]},{"path":"https://agdamsbo.github.io/FreesearchR/articles/session.html","id":"platform-info","dir":"Articles","previous_headings":"","what":"Platform info","title":"Session info","text":"","code":"FreesearchR:::session_data$platform |> knitr::kable()"},{"path":"https://agdamsbo.github.io/FreesearchR/articles/session.html","id":"libraries","dir":"Articles","previous_headings":"","what":"Libraries","title":"Session info","text":"","code":"FreesearchR:::session_data$libs|> knitr::kable()"},{"path":"https://agdamsbo.github.io/FreesearchR/authors.html","id":null,"dir":"","previous_headings":"","what":"Authors","title":"Authors and Citation","text":"Andreas Gammelgaard Damsbo. Author, maintainer. Jutta Mari Adelin Jørgensen. Contributor. Anne Brink Behrndtz. Contributor.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/authors.html","id":"citation","dir":"","previous_headings":"","what":"Citation","title":"Authors and Citation","text":"Damsbo (2025). FreesearchR: Easy data analysis clinicians. R package version 25.12.3, https://github.com/agdamsbo/FreesearchR.","code":"@Manual{, title = {FreesearchR: Easy data analysis for clinicians}, author = {Andreas Gammelgaard Damsbo}, year = {2025}, note = {R package version 25.12.3}, url = {https://github.com/agdamsbo/FreesearchR}, }"},{"path":"https://agdamsbo.github.io/FreesearchR/index.html","id":"freesearchr-","dir":"","previous_headings":"","what":"Easy data analysis for clinicians","title":"Easy data analysis for clinicians","text":"FreesearchR simple, clinical health data exploration analysis tool democratise clinical research assisting researcher easily evaluate analyse data export publication ready results. FreesearchR free open-source, accessible web browser link. app can also run locally, please see . feedback welcome can shared GitHub issue. suggestions collaboration much welcomed. Please reach !","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/index.html","id":"motivation","dir":"","previous_headings":"","what":"Motivation","title":"Easy data analysis for clinicians","text":"app following simple goals: help health clinician getting overview data quality improvement projects clinical research help learners get good start analysing data coding R ease quick data overview basic visualisations clinical researcher","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/index.html","id":"run-locally-on-your-own-machine","dir":"","previous_headings":"","what":"Run locally on your own machine","title":"Easy data analysis for clinicians","text":"FreesearchR app can also run machine data transmitted anywhere. Blow available options.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/index.html","id":"run-from-r-or-rstduio","dir":"","previous_headings":"Run locally on your own machine","what":"Run from R (or RStduio)","title":"Easy data analysis for clinicians","text":"Working data R, FreesearchR quick easy tool get overview perform first explorative analyses get going. data available R session available FreesearchR app. Just follow steps get going: Requirement: need R installed possibly editor like RStudio. open R console copy/paste following code, install devtools package FreesearchR R-package dependencies:","code":"require(\"devtools\") devtools::install_github(\"agdamsbo/FreesearchR\") library(FreesearchR) # By loading mtcars to the environment, it will be available # in the interface like any other data.frame data(mtcars) launch_FreesearchR()"},{"path":"https://agdamsbo.github.io/FreesearchR/index.html","id":"running-with-docker-compose","dir":"","previous_headings":"Run locally on your own machine","what":"Running with docker compose","title":"Easy data analysis for clinicians","text":"advanced users, wanting deploy FreesearchR app run anywhere, docker image available. minimal docker_compose.yml file:","code":"services: freesearchr: image: ghcr.io/agdamsbo/freesearchr:latest ports: - '3838:3838' restart: on-failure"},{"path":"https://agdamsbo.github.io/FreesearchR/index.html","id":"code-of-conduct","dir":"","previous_headings":"","what":"Code of Conduct","title":"Easy data analysis for clinicians","text":"Please note FreesearchR project published Contributor Code Conduct. contributing project, agree abide terms.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/index.html","id":"translators","dir":"","previous_headings":"","what":"Translators","title":"Easy data analysis for clinicians","text":"Thank much translators helped translate validate translation drafts.","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/index.html","id":"acknowledgements","dir":"","previous_headings":"","what":"Acknowledgements","title":"Easy data analysis for clinicians","text":"Like project, project never possible without great work others. sources packages used: FreesearchR app built Shiny based R. gtsummary: superb flexible way create publication-ready analytical summary tables. dreamRs: maintainers broad selection great extensions tools Shiny. easystats: performance::check_model() function central sparking idea create data analysis tool. IDEAfilter: visually appealing data filter function based {shinyDataFilter}. project written human AI-based tools. online FreesearchR app contains tracking script, transmitting minimal data usage. uploaded data transmitted anywhere. look tracking data . tracking data sent running app locally (see ).","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/reference/FreesearchR_palette.html","id":null,"dir":"Reference","previous_headings":"","what":"Use the FreesearchR colors — FreesearchR_palette","title":"Use the FreesearchR colors — FreesearchR_palette","text":"Use FreesearchR colors","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/reference/FreesearchR_palette.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Use the FreesearchR colors — FreesearchR_palette","text":"","code":"FreesearchR_palette(n)"},{"path":"https://agdamsbo.github.io/FreesearchR/reference/FreesearchR_palette.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Use the FreesearchR colors — FreesearchR_palette","text":"n number colors","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/reference/FreesearchR_palette.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Use the FreesearchR colors — FreesearchR_palette","text":"character vector","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/reference/FreesearchR_palette.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Use the FreesearchR colors — FreesearchR_palette","text":"","code":"FreesearchR_palette(n=7) #> [1] \"#1E4A8F\" \"#FF6F61\" \"#00C896\" \"#FFB100\" \"#CC2E25\" \"#8A4FFF\" \"#11A0EC\""},{"path":"https://agdamsbo.github.io/FreesearchR/reference/add_class_icon.html","id":null,"dir":"Reference","previous_headings":"","what":"Convert class grid column to icon — add_class_icon","title":"Convert class grid column to icon — add_class_icon","text":"Convert class grid column icon","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/reference/add_class_icon.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Convert class grid column to icon — add_class_icon","text":"","code":"add_class_icon(grid, column = \"class\", fun = class_icons)"},{"path":"https://agdamsbo.github.io/FreesearchR/reference/add_class_icon.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Convert class grid column to icon — add_class_icon","text":"grid grid column column","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/reference/add_class_icon.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Convert class grid column to icon — add_class_icon","text":"datagrid","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/reference/add_class_icon.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Convert class grid column to icon — add_class_icon","text":"","code":"mtcars |> overview_vars() |> toastui::datagrid() |> add_class_icon() {\"x\":{\"nrow\":11,\"ncol\":7,\"data\":[[\"numeric\",\"numeric\",\"numeric\",\"numeric\",\"numeric\",\"numeric\",\"numeric\",\"numeric\",\"numeric\",\"numeric\",\"numeric\"],[\"numeric\",\"numeric\",\"numeric\",\"numeric\",\"numeric\",\"numeric\",\"numeric\",\"numeric\",\"numeric\",\"numeric\",\"numeric\"],[\"mpg\",\"cyl\",\"disp\",\"hp\",\"drat\",\"wt\",\"qsec\",\"vs\",\"am\",\"gear\",\"carb\"],[0,0,0,0,0,0,0,0,0,0,0],[1,1,1,1,1,1,1,1,1,1,1],[25,3,27,22,22,29,30,2,2,3,6],[[21,21,22.8,21.4,18.7,18.1,14.3,24.4,22.8,19.2,17.8,16.4,17.3,15.2,10.4,10.4,14.7,32.4,30.4,33.9,21.5,15.5,15.2,13.3,19.2,27.3,26,30.4,15.8,19.7,15,21.4],[6,6,4,6,8,6,8,4,4,6,6,8,8,8,8,8,8,4,4,4,4,8,8,8,8,4,4,4,8,6,8,4],[160,160,108,258,360,225,360,146.7,140.8,167.6,167.6,275.8,275.8,275.8,472,460,440,78.7,75.7,71.09999999999999,120.1,318,304,350,400,79,120.3,95.09999999999999,351,145,301,121],[110,110,93,110,175,105,245,62,95,123,123,180,180,180,205,215,230,66,52,65,97,150,150,245,175,66,91,113,264,175,335,109],[3.9,3.9,3.85,3.08,3.15,2.76,3.21,3.69,3.92,3.92,3.92,3.07,3.07,3.07,2.93,3,3.23,4.08,4.93,4.22,3.7,2.76,3.15,3.73,3.08,4.08,4.43,3.77,4.22,3.62,3.54,4.11],[2.62,2.875,2.32,3.215,3.44,3.46,3.57,3.19,3.15,3.44,3.44,4.07,3.73,3.78,5.25,5.424,5.345,2.2,1.615,1.835,2.465,3.52,3.435,3.84,3.845,1.935,2.14,1.513,3.17,2.77,3.57,2.78],[16.46,17.02,18.61,19.44,17.02,20.22,15.84,20,22.9,18.3,18.9,17.4,17.6,18,17.98,17.82,17.42,19.47,18.52,19.9,20.01,16.87,17.3,15.41,17.05,18.9,16.7,16.9,14.5,15.5,14.6,18.6],[0,0,1,1,0,1,0,1,1,1,1,0,0,0,0,0,0,1,1,1,1,0,0,0,0,1,0,1,0,0,0,1],[1,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,1,0,0,0,0,0,1,1,1,1,1,1,1],[4,4,4,3,3,3,3,4,4,4,4,3,3,3,3,3,3,4,4,4,3,3,3,3,3,4,5,5,5,5,5,4],[4,4,1,1,2,1,4,2,2,4,4,3,3,3,4,4,4,1,2,1,1,2,2,4,2,1,2,2,4,6,8,2]]],\"colnames\":[\"icon\",\"class\",\"name\",\"n_missing\",\"p_complete\",\"n_unique\",\"vals\"],\"options\":{\"columns\":[{\"header\":\"icon\",\"name\":\"icon\",\"sortable\":true,\"align\":\"left\",\"whiteSpace\":\"normal\",\"renderer\":{\"styles\":{\"wordBreak\":\"normal\"}}},{\"header\":\"class\",\"name\":\"class\",\"sortable\":true,\"align\":\"left\",\"whiteSpace\":\"normal\",\"renderer\":{\"styles\":{\"wordBreak\":\"normal\"},\"type\":\"datagrid.renderer.format\",\"options\":{\"formatted\":[\"<\\/i>\",\"<\\/i>\",\"<\\/i>\",\"<\\/i>\",\"<\\/i>\",\"<\\/i>\",\"<\\/i>\",\"<\\/i>\",\"<\\/i>\",\"<\\/i>\",\"<\\/i>\"]}},\"width\":60},{\"header\":\"name\",\"name\":\"name\",\"sortable\":true,\"align\":\"left\",\"whiteSpace\":\"normal\",\"renderer\":{\"styles\":{\"wordBreak\":\"normal\"}}},{\"header\":\"n_missing\",\"name\":\"n_missing\",\"sortable\":true,\"align\":\"right\",\"whiteSpace\":\"normal\",\"renderer\":{\"styles\":{\"wordBreak\":\"normal\"}}},{\"header\":\"p_complete\",\"name\":\"p_complete\",\"sortable\":true,\"align\":\"right\",\"whiteSpace\":\"normal\",\"renderer\":{\"styles\":{\"wordBreak\":\"normal\"}}},{\"header\":\"n_unique\",\"name\":\"n_unique\",\"sortable\":true,\"align\":\"right\",\"whiteSpace\":\"normal\",\"renderer\":{\"styles\":{\"wordBreak\":\"normal\"}}},{\"header\":\"vals\",\"name\":\"vals\",\"sortable\":true,\"align\":\"left\",\"whiteSpace\":\"normal\",\"renderer\":{\"styles\":{\"wordBreak\":\"normal\"}}}],\"bodyHeight\":\"fitToParent\",\"draggable\":false,\"usageStatistics\":false,\"contextMenu\":null,\"rowHeight\":\"auto\"},\"theme\":\"clean\",\"themeOptions\":{\"cell\":{\"normal\":{\"showHorizontalBorder\":true}}},\"language\":\"en\",\"languageOptions\":[],\"filters\":false,\"rowAttributes\":[],\"validationInput\":false,\"dataAsInput\":false,\"dragInput\":false},\"evals\":[\"options.columns.1.renderer.type\"],\"jsHooks\":[]}"},{"path":"https://agdamsbo.github.io/FreesearchR/reference/add_sparkline.html","id":null,"dir":"Reference","previous_headings":"","what":"Add sparkline to datagrid — add_sparkline","title":"Add sparkline to datagrid — add_sparkline","text":"Add sparkline datagrid","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/reference/add_sparkline.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Add sparkline to datagrid — add_sparkline","text":"","code":"add_sparkline( grid, column = \"vals\", color.main = \"#2a8484\", color.sec = \"#84EF84\" )"},{"path":"https://agdamsbo.github.io/FreesearchR/reference/add_sparkline.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Add sparkline to datagrid — add_sparkline","text":"grid grid column clumn transform","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/reference/add_sparkline.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Add sparkline to datagrid — add_sparkline","text":"datagrid","code":""},{"path":"https://agdamsbo.github.io/FreesearchR/reference/add_sparkline.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Add sparkline to datagrid — add_sparkline","text":"","code":"grid <- mtcars |> default_parsing() |> overview_vars() |> toastui::datagrid() |> add_sparkline() grid {\"x\":{\"nrow\":11,\"ncol\":7,\"data\":[[\"numeric\",\"factor\",\"numeric\",\"numeric\",\"numeric\",\"numeric\",\"numeric\",\"logical\",\"logical\",\"factor\",\"factor\"],[\"numeric\",\"factor\",\"numeric\",\"numeric\",\"numeric\",\"numeric\",\"numeric\",\"logical\",\"logical\",\"factor\",\"factor\"],[\"mpg\",\"cyl\",\"disp\",\"hp\",\"drat\",\"wt\",\"qsec\",\"vs\",\"am\",\"gear\",\"carb\"],[0,0,0,0,0,0,0,0,0,0,0],[1,1,1,1,1,1,1,1,1,1,1],[25,3,27,22,22,29,30,2,2,3,6],[[21,21,22.8,21.4,18.7,18.1,14.3,24.4,22.8,19.2,17.8,16.4,17.3,15.2,10.4,10.4,14.7,32.4,30.4,33.9,21.5,15.5,15.2,13.3,19.2,27.3,26,30.4,15.8,19.7,15,21.4],[\"6\",\"6\",\"4\",\"6\",\"8\",\"6\",\"8\",\"4\",\"4\",\"6\",\"6\",\"8\",\"8\",\"8\",\"8\",\"8\",\"8\",\"4\",\"4\",\"4\",\"4\",\"8\",\"8\",\"8\",\"8\",\"4\",\"4\",\"4\",\"8\",\"6\",\"8\",\"4\"],[160,160,108,258,360,225,360,146.7,140.8,167.6,167.6,275.8,275.8,275.8,472,460,440,78.7,75.7,71.09999999999999,120.1,318,304,350,400,79,120.3,95.09999999999999,351,145,301,121],[110,110,93,110,175,105,245,62,95,123,123,180,180,180,205,215,230,66,52,65,97,150,150,245,175,66,91,113,264,175,335,109],[3.9,3.9,3.85,3.08,3.15,2.76,3.21,3.69,3.92,3.92,3.92,3.07,3.07,3.07,2.93,3,3.23,4.08,4.93,4.22,3.7,2.76,3.15,3.73,3.08,4.08,4.43,3.77,4.22,3.62,3.54,4.11],[2.62,2.875,2.32,3.215,3.44,3.46,3.57,3.19,3.15,3.44,3.44,4.07,3.73,3.78,5.25,5.424,5.345,2.2,1.615,1.835,2.465,3.52,3.435,3.84,3.845,1.935,2.14,1.513,3.17,2.77,3.57,2.78],[16.46,17.02,18.61,19.44,17.02,20.22,15.84,20,22.9,18.3,18.9,17.4,17.6,18,17.98,17.82,17.42,19.47,18.52,19.9,20.01,16.87,17.3,15.41,17.05,18.9,16.7,16.9,14.5,15.5,14.6,18.6],[false,false,true,true,false,true,false,true,true,true,true,false,false,false,false,false,false,true,true,true,true,false,false,false,false,true,false,true,false,false,false,true],[true,true,true,false,false,false,false,false,false,false,false,false,false,false,false,false,false,true,true,true,false,false,false,false,false,true,true,true,true,true,true,true],[\"4\",\"4\",\"4\",\"3\",\"3\",\"3\",\"3\",\"4\",\"4\",\"4\",\"4\",\"3\",\"3\",\"3\",\"3\",\"3\",\"3\",\"4\",\"4\",\"4\",\"3\",\"3\",\"3\",\"3\",\"3\",\"4\",\"5\",\"5\",\"5\",\"5\",\"5\",\"4\"],[\"4\",\"4\",\"1\",\"1\",\"2\",\"1\",\"4\",\"2\",\"2\",\"4\",\"4\",\"3\",\"3\",\"3\",\"4\",\"4\",\"4\",\"1\",\"2\",\"1\",\"1\",\"2\",\"2\",\"4\",\"2\",\"1\",\"2\",\"2\",\"4\",\"6\",\"8\",\"2\"]]],\"colnames\":[\"icon\",\"class\",\"name\",\"n_missing\",\"p_complete\",\"n_unique\",\"vals\"],\"options\":{\"columns\":[{\"header\":\"icon\",\"name\":\"icon\",\"sortable\":true,\"align\":\"left\",\"whiteSpace\":\"normal\",\"renderer\":{\"styles\":{\"wordBreak\":\"normal\"}}},{\"header\":\"class\",\"name\":\"class\",\"sortable\":true,\"align\":\"left\",\"whiteSpace\":\"normal\",\"renderer\":{\"styles\":{\"wordBreak\":\"normal\"}}},{\"header\":\"name\",\"name\":\"name\",\"sortable\":true,\"align\":\"left\",\"whiteSpace\":\"normal\",\"renderer\":{\"styles\":{\"wordBreak\":\"normal\"}}},{\"header\":\"n_missing\",\"name\":\"n_missing\",\"sortable\":true,\"align\":\"right\",\"whiteSpace\":\"normal\",\"renderer\":{\"styles\":{\"wordBreak\":\"normal\"}}},{\"header\":\"p_complete\",\"name\":\"p_complete\",\"sortable\":true,\"align\":\"right\",\"whiteSpace\":\"normal\",\"renderer\":{\"styles\":{\"wordBreak\":\"normal\"}}},{\"header\":\"n_unique\",\"name\":\"n_unique\",\"sortable\":true,\"align\":\"right\",\"whiteSpace\":\"normal\",\"renderer\":{\"styles\":{\"wordBreak\":\"normal\"}}},{\"header\":\"vals\",\"name\":\"vals\",\"sortable\":true,\"align\":\"left\",\"whiteSpace\":\"normal\",\"renderer\":{\"styles\":{\"wordBreak\":\"normal\"},\"type\":\"datagrid.renderer.htmlwidgets\",\"options\":{\"rendered\":[\"
<\\/div>\\n