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agdamsbo
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34 changed files with 1196 additions and 161 deletions
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@ -4,11 +4,13 @@ Wrapper to create plot based on provided type
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Nice horizontal stacked bars (Grotta bars)
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Beatiful violin plot
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Beautiful violin plot
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Readying data for sankey plot
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Beautiful sankey plot with option to split by a tertiary group"><meta property="og:description" content="Title
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Wrapper to create plot based on provided type
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Nice horizontal stacked bars (Grotta bars)
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Beatiful violin plot
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Beautiful violin plot
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Readying data for sankey plot
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Beautiful sankey plot with option to split by a tertiary group"></head><body>
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<a href="#main" class="visually-hidden-focusable">Skip to contents</a>
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@ -51,6 +53,7 @@ Beautiful sankey plot with option to split by a tertiary group"></head><body>
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<p>Nice horizontal stacked bars (Grotta bars)</p>
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<p>Beatiful violin plot</p>
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<p>Beautiful violin plot</p>
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<p>Readying data for sankey plot</p>
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<p>Beautiful sankey plot with option to split by a tertiary group</p>
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</div>
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@ -66,6 +69,8 @@ Beautiful sankey plot with option to split by a tertiary group"></head><body>
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<span></span>
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<span><span class="fu">plot_scatter</span><span class="op">(</span><span class="va">data</span>, <span class="va">x</span>, <span class="va">y</span>, z <span class="op">=</span> <span class="cn">NULL</span><span class="op">)</span></span>
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<span></span>
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<span><span class="fu">sankey_ready</span><span class="op">(</span><span class="va">data</span>, <span class="va">x</span>, <span class="va">y</span>, z <span class="op">=</span> <span class="cn">NULL</span>, numbers <span class="op">=</span> <span class="st">"count"</span><span class="op">)</span></span>
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<span></span>
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<span><span class="fu">plot_sankey</span><span class="op">(</span><span class="va">data</span>, <span class="va">x</span>, <span class="va">y</span>, z <span class="op">=</span> <span class="cn">NULL</span>, color.group <span class="op">=</span> <span class="st">"x"</span>, colors <span class="op">=</span> <span class="cn">NULL</span><span class="op">)</span></span></code></pre></div>
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</div>
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@ -73,7 +78,23 @@ Beautiful sankey plot with option to split by a tertiary group"></head><body>
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<h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
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<dl><dt id="arg--">...<a class="anchor" aria-label="anchor" href="#arg--"></a></dt>
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<dl><dt id="arg-data">data<a class="anchor" aria-label="anchor" href="#arg-data"></a></dt>
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<dd><p>data.frame</p></dd>
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<dt id="arg-x">x<a class="anchor" aria-label="anchor" href="#arg-x"></a></dt>
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<dd><p>primary variable</p></dd>
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<dt id="arg-y">y<a class="anchor" aria-label="anchor" href="#arg-y"></a></dt>
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<dd><p>secondary variable</p></dd>
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<dt id="arg-z">z<a class="anchor" aria-label="anchor" href="#arg-z"></a></dt>
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<dd><p>tertiary variable</p></dd>
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<dt id="arg--">...<a class="anchor" aria-label="anchor" href="#arg--"></a></dt>
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<dd><p>ignored for now</p></dd>
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@ -88,6 +109,7 @@ Beautiful sankey plot with option to split by a tertiary group"></head><body>
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<p>ggplot2 object</p>
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<p>ggplot2 object</p>
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<p>ggplot2 object</p>
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<p>data.frame</p>
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<p>ggplot2 object</p>
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</div>
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@ -148,6 +170,53 @@ Beautiful sankey plot with option to split by a tertiary group"></head><body>
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<span class="r-plt img"><img src="data-plots-4.png" alt="" width="700" height="433"></span>
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<span class="r-in"><span><span class="va">mtcars</span> <span class="op">|></span> <span class="fu">plot_scatter</span><span class="op">(</span>x <span class="op">=</span> <span class="st">"mpg"</span>, y <span class="op">=</span> <span class="st">"wt"</span><span class="op">)</span></span></span>
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<span class="r-plt img"><img src="data-plots-5.png" alt="" width="700" height="433"></span>
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<span class="r-in"><span><span class="va">ds</span> <span class="op"><-</span> <span class="fu"><a href="https://rdrr.io/r/base/data.frame.html" class="external-link">data.frame</a></span><span class="op">(</span>g <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/sample.html" class="external-link">sample</a></span><span class="op">(</span><span class="va">LETTERS</span><span class="op">[</span><span class="fl">1</span><span class="op">:</span><span class="fl">2</span><span class="op">]</span>, <span class="fl">100</span>, <span class="cn">TRUE</span><span class="op">)</span>, first <span class="op">=</span> <span class="fu">REDCapCAST</span><span class="fu">::</span><span class="fu">as_factor</span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/sample.html" class="external-link">sample</a></span><span class="op">(</span><span class="va">letters</span><span class="op">[</span><span class="fl">1</span><span class="op">:</span><span class="fl">4</span><span class="op">]</span>, <span class="fl">100</span>, <span class="cn">TRUE</span><span class="op">)</span><span class="op">)</span>, last <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/sample.html" class="external-link">sample</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="va">letters</span><span class="op">[</span><span class="fl">1</span><span class="op">:</span><span class="fl">4</span><span class="op">]</span>, <span class="cn">NA</span><span class="op">)</span>, <span class="fl">100</span>, <span class="cn">TRUE</span>, prob <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="fl">.23</span>, <span class="fl">4</span><span class="op">)</span>, <span class="fl">.08</span><span class="op">)</span><span class="op">)</span><span class="op">)</span></span></span>
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<span class="r-in"><span><span class="va">ds</span> <span class="op">|></span> <span class="fu">sankey_ready</span><span class="op">(</span><span class="st">"first"</span>, <span class="st">"last"</span><span class="op">)</span></span></span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># A tibble: 19 × 7</span></span>
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<span class="r-out co"><span class="r-pr">#></span> first last n gx.sum gy.sum lx ly </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494; font-style: italic;"><fct></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><int></span> <span style="color: #949494; font-style: italic;"><int></span> <span style="color: #949494; font-style: italic;"><int></span> <span style="color: #949494; font-style: italic;"><fct></span> <span style="color: #949494; font-style: italic;"><fct></span> </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 1</span> c a 7 28 32 <span style="color: #949494;">"</span>c\n(n=28)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>a\n(n=32)<span style="color: #949494;">"</span> </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 2</span> c b 6 28 26 <span style="color: #949494;">"</span>c\n(n=28)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>b\n(n=26)<span style="color: #949494;">"</span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 3</span> c c 5 28 15 <span style="color: #949494;">"</span>c\n(n=28)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>c\n(n=15)<span style="color: #949494;">"</span> </span>
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||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 4</span> c d 6 28 17 <span style="color: #949494;">"</span>c\n(n=28)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>d\n(n=17)<span style="color: #949494;">"</span> </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 5</span> c <span style="color: #BB0000;">NA</span> 4 28 10 <span style="color: #949494;">"</span>c\n(n=28)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>NA\n(n=10)<span style="color: #949494;">"</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 6</span> a a 9 24 32 <span style="color: #949494;">"</span>a\n(n=24)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>a\n(n=32)<span style="color: #949494;">"</span> </span>
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 7</span> a b 6 24 26 <span style="color: #949494;">"</span>a\n(n=24)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>b\n(n=26)<span style="color: #949494;">"</span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 8</span> a c 6 24 15 <span style="color: #949494;">"</span>a\n(n=24)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>c\n(n=15)<span style="color: #949494;">"</span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 9</span> a d 1 24 17 <span style="color: #949494;">"</span>a\n(n=24)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>d\n(n=17)<span style="color: #949494;">"</span> </span>
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||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">10</span> a <span style="color: #BB0000;">NA</span> 2 24 10 <span style="color: #949494;">"</span>a\n(n=24)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>NA\n(n=10)<span style="color: #949494;">"</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">11</span> b a 8 20 32 <span style="color: #949494;">"</span>b\n(n=20)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>a\n(n=32)<span style="color: #949494;">"</span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">12</span> b b 5 20 26 <span style="color: #949494;">"</span>b\n(n=20)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>b\n(n=26)<span style="color: #949494;">"</span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">13</span> b c 4 20 15 <span style="color: #949494;">"</span>b\n(n=20)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>c\n(n=15)<span style="color: #949494;">"</span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">14</span> b d 2 20 17 <span style="color: #949494;">"</span>b\n(n=20)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>d\n(n=17)<span style="color: #949494;">"</span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">15</span> b <span style="color: #BB0000;">NA</span> 1 20 10 <span style="color: #949494;">"</span>b\n(n=20)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>NA\n(n=10)<span style="color: #949494;">"</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">16</span> d a 8 28 32 <span style="color: #949494;">"</span>d\n(n=28)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>a\n(n=32)<span style="color: #949494;">"</span> </span>
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||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">17</span> d b 9 28 26 <span style="color: #949494;">"</span>d\n(n=28)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>b\n(n=26)<span style="color: #949494;">"</span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">18</span> d d 8 28 17 <span style="color: #949494;">"</span>d\n(n=28)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>d\n(n=17)<span style="color: #949494;">"</span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">19</span> d <span style="color: #BB0000;">NA</span> 3 28 10 <span style="color: #949494;">"</span>d\n(n=28)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>NA\n(n=10)<span style="color: #949494;">"</span></span>
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||||
<span class="r-in"><span><span class="va">ds</span> <span class="op">|></span> <span class="fu">sankey_ready</span><span class="op">(</span><span class="st">"first"</span>, <span class="st">"last"</span>, numbers <span class="op">=</span> <span class="st">"percentage"</span><span class="op">)</span></span></span>
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||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># A tibble: 19 × 7</span></span>
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<span class="r-out co"><span class="r-pr">#></span> first last n gx.sum gy.sum lx ly </span>
|
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<span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494; font-style: italic;"><fct></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><int></span> <span style="color: #949494; font-style: italic;"><int></span> <span style="color: #949494; font-style: italic;"><int></span> <span style="color: #949494; font-style: italic;"><fct></span> <span style="color: #949494; font-style: italic;"><fct></span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 1</span> c a 7 28 32 <span style="color: #949494;">"</span>c\n(28%)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>a\n(32%)<span style="color: #949494;">"</span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 2</span> c b 6 28 26 <span style="color: #949494;">"</span>c\n(28%)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>b\n(26%)<span style="color: #949494;">"</span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 3</span> c c 5 28 15 <span style="color: #949494;">"</span>c\n(28%)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>c\n(15%)<span style="color: #949494;">"</span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 4</span> c d 6 28 17 <span style="color: #949494;">"</span>c\n(28%)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>d\n(17%)<span style="color: #949494;">"</span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 5</span> c <span style="color: #BB0000;">NA</span> 4 28 10 <span style="color: #949494;">"</span>c\n(28%)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>NA\n(10%)<span style="color: #949494;">"</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 6</span> a a 9 24 32 <span style="color: #949494;">"</span>a\n(24%)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>a\n(32%)<span style="color: #949494;">"</span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 7</span> a b 6 24 26 <span style="color: #949494;">"</span>a\n(24%)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>b\n(26%)<span style="color: #949494;">"</span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 8</span> a c 6 24 15 <span style="color: #949494;">"</span>a\n(24%)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>c\n(15%)<span style="color: #949494;">"</span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 9</span> a d 1 24 17 <span style="color: #949494;">"</span>a\n(24%)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>d\n(17%)<span style="color: #949494;">"</span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">10</span> a <span style="color: #BB0000;">NA</span> 2 24 10 <span style="color: #949494;">"</span>a\n(24%)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>NA\n(10%)<span style="color: #949494;">"</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">11</span> b a 8 20 32 <span style="color: #949494;">"</span>b\n(20%)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>a\n(32%)<span style="color: #949494;">"</span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">12</span> b b 5 20 26 <span style="color: #949494;">"</span>b\n(20%)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>b\n(26%)<span style="color: #949494;">"</span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">13</span> b c 4 20 15 <span style="color: #949494;">"</span>b\n(20%)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>c\n(15%)<span style="color: #949494;">"</span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">14</span> b d 2 20 17 <span style="color: #949494;">"</span>b\n(20%)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>d\n(17%)<span style="color: #949494;">"</span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">15</span> b <span style="color: #BB0000;">NA</span> 1 20 10 <span style="color: #949494;">"</span>b\n(20%)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>NA\n(10%)<span style="color: #949494;">"</span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">16</span> d a 8 28 32 <span style="color: #949494;">"</span>d\n(28%)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>a\n(32%)<span style="color: #949494;">"</span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">17</span> d b 9 28 26 <span style="color: #949494;">"</span>d\n(28%)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>b\n(26%)<span style="color: #949494;">"</span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">18</span> d d 8 28 17 <span style="color: #949494;">"</span>d\n(28%)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>d\n(17%)<span style="color: #949494;">"</span> </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">19</span> d <span style="color: #BB0000;">NA</span> 3 28 10 <span style="color: #949494;">"</span>d\n(28%)<span style="color: #949494;">"</span> <span style="color: #949494;">"</span>NA\n(10%)<span style="color: #949494;">"</span></span>
|
||||
<span class="r-in"><span><span class="va">ds</span> <span class="op"><-</span> <span class="fu"><a href="https://rdrr.io/r/base/data.frame.html" class="external-link">data.frame</a></span><span class="op">(</span>g <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/sample.html" class="external-link">sample</a></span><span class="op">(</span><span class="va">LETTERS</span><span class="op">[</span><span class="fl">1</span><span class="op">:</span><span class="fl">2</span><span class="op">]</span>, <span class="fl">100</span>, <span class="cn">TRUE</span><span class="op">)</span>, first <span class="op">=</span> <span class="fu">REDCapCAST</span><span class="fu">::</span><span class="fu">as_factor</span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/sample.html" class="external-link">sample</a></span><span class="op">(</span><span class="va">letters</span><span class="op">[</span><span class="fl">1</span><span class="op">:</span><span class="fl">4</span><span class="op">]</span>, <span class="fl">100</span>, <span class="cn">TRUE</span><span class="op">)</span><span class="op">)</span>, last <span class="op">=</span> <span class="fu">REDCapCAST</span><span class="fu">::</span><span class="fu">as_factor</span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/sample.html" class="external-link">sample</a></span><span class="op">(</span><span class="va">letters</span><span class="op">[</span><span class="fl">1</span><span class="op">:</span><span class="fl">4</span><span class="op">]</span>, <span class="fl">100</span>, <span class="cn">TRUE</span><span class="op">)</span><span class="op">)</span><span class="op">)</span></span></span>
|
||||
<span class="r-in"><span><span class="va">ds</span> <span class="op">|></span> <span class="fu">plot_sankey</span><span class="op">(</span><span class="st">"first"</span>, <span class="st">"last"</span><span class="op">)</span></span></span>
|
||||
<span class="r-msg co"><span class="r-pr">#></span> Loading required package: ggplot2</span>
|
||||
|
|
|
|||
Loading…
Add table
Add a link
Reference in a new issue