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reverting and recovering from renv corruption

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Andreas Gammelgaard Damsbo 2024-12-19 21:21:29 +01:00
commit 2ad36d6dde
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12 changed files with 78 additions and 128 deletions
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7
R/redcap_read_shiny_module.R
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@ -100,7 +100,6 @@ m_redcap_readUI <- function(id, include_title = TRUE) {
#'
#' @return shiny server module
#' @export
#' @importFrom REDCapCAST read_redcap_tables redcap_wider suffix2label
#'
m_redcap_readServer <- function(id, output.format = c("df", "teal", "list")) {
output.format <- match.arg(output.format)
@ -227,7 +226,7 @@ m_redcap_readServer <- function(id, output.format = c("df", "teal", "list")) {
shiny::req(input$fields)
record_id <- dd()[[1]][1]
redcap_data <- read_redcap_tables(
redcap_data <- REDCapCAST::read_redcap_tables(
uri = input$uri,
token = input$api,
fields = unique(c(record_id, input$fields)),
@ -236,10 +235,10 @@ m_redcap_readServer <- function(id, output.format = c("df", "teal", "list")) {
raw_or_label = "both",
filter_logic = input$filter
) |>
redcap_wider() |>
REDCapCAST::redcap_wider() |>
dplyr::select(-dplyr::ends_with("_complete")) |>
dplyr::select(-dplyr::any_of(record_id)) |>
suffix2label()
REDCapCAST::suffix2label()
out_object <- file_export(redcap_data,
output.format = output.format,