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# Package index

## All functions

`add_class_icon()`
  Convert class grid column to icon

`add_sparkline()`
  Add sparkline to datagrid

`all_but()`
  Select all from vector but

`append_list()`
  Append list with named index

`argsstring2list()`
  Convert string of arguments to list of arguments

`baseline_table()`
  Print a flexible baseline characteristics table

`clean_date()`
  Attempts at applying uniform date format

`clean_sep()`
  gsub wrapper for piping with default values for separator substituting

`contrast_text()`
  Contrast Text Color

`create_overview_datagrid()`
  Create a data overview datagrid

`custom_theme()`
  Custom theme based on unity

`cut_variable_ui()` `cut_variable_server()` `modal_cut_variable()` `winbox_cut_variable()`
  Module to Convert Numeric to Factor

`cut(<hms>)` `cut(<POSIXt>)` `cut(<POSIXct>)` `cut(<Date>)`
  Extended cutting function

`data_correlations_ui()` `data_correlations_server()` `data_visuals_ui()` `data_visuals_server()`
  Data correlations evaluation module

`plot_ridge()` `create_plot()` `plot_hbars()` `plot_violin()` `plot_scatter()` `plot_sankey()`
  Title

`data_summary_ui()` `data_summary_server()`
  Data summary module

`default_format_arguments()`
  Defaults qmd formats

`default_parsing()`
  Default data parsing

`factorize()`
  Factorize variables in data.frame

`file_export()`
  Title

`format_writer()`
  Merges list of named arguments for qmd header generation

`get_fun_options()`
  Get the function options based on the selected function description

`get_label()`
  Print label, and if missing print variable name

`get_plot_options()`
  Get the function options based on the selected function description

`getfun()`
  Wrapper function to get function from character vector referring to function from namespace. Passed to 'do.call()'

`gg_theme_export()`
  GGplot default theme for plotting export objects

`gg_theme_shiny()`
  GGplot default theme for plotting in Shiny

`index_embed()`
  Split vector by an index and embed addition

`is_any_class()`
  Test class

`is_consecutive()`
  Checks if elements in vector are equally spaced as indication of ID

`is_datetime()`
  Test is date/datetime/time

`is_valid_redcap_url()`
  Title

`is_valid_token()`
  Validate REDCap token

`launch_freesearcheR()`
  Easily launch the freesearcheR app

`line_break()`
  Line breaking at given number of characters for nicely plotting labels

`m_datafileUI()`
  Shiny UI module to load a data file

`merge_long()`
  Wrapper to pivot gtsummary table data to long for plotting

`modify_qmd()`
  Wrapper to modify quarto file to render specific formats

`outcome_type()`
  Outcome data type assessment

`overview_vars()`
  Create a data overview data.frame ready for sparklines

`plot(<tbl_regression>)`
  Regression coef plot from gtsummary. Slightly modified to pass on arguments

`plot_sankey_single()`
  Beautiful sankey plot

`possible_functions()`
  Get possible regression models

`possible_plots()`
  Get possible regression models

`read_input()`
  Flexible file import based on extension

`m_redcap_readUI()` `m_redcap_readServer()` `redcap_demo_app()`
  Shiny module to browser and export REDCap data

`regression_model()` `regression_model_uv()` `regression_model_list()` `regression_model_uv_list()`
  Create a regression model programatically

`regression_table()`
  Create table of regression model

`remove_empty_cols()`
  Removes columns with completenes below cutoff

`remove_na_attr()`
  Remove NA labels

`sankey_ready()`
  Readying data for sankey plot

`shiny_freesearcheR()`
  Launch the freesearcheR tool locally

`specify_qmd_format()`
  Specify format arguments to include in qmd header/frontmatter

`subset_types()`
  Easily subset by data type function

`supported_functions()`
  Implemented functions

`supported_plots()`
  Implemented functions

`tbl_merge()`
  A substitue to gtsummary::tbl_merge, that will use list names for the tab spanner names.

`update_factor_ui()` `update_factor_server()` `modal_update_factor()`
  Module to Reorder the Levels of a Factor Variable

`update_variables_ui()` `update_variables_server()`
  Select, rename and convert variables

`update_variables_datagrid()`
  Modified from the datamods pacakge

`vertical_stacked_bars()`
  Vertical stacked bar plot wrapper

`write_quarto()`
  Wrapper to save data in RDS, load into specified qmd and render